RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 SMARCC1Q92922 1105 aaPredicted RBP15.02■□□□□ -0
GPC1-209ENST00000495100 BPIFA3Q9BQP9 254 aa15.02■□□□□ -0
GPC1-209ENST00000495100 ZC3H12CQ9C0D7 883 aaKnown RBP15.02■□□□□ -0
GPC1-209ENST00000495100 DISC1Q9NRI5 854 aa15.02■□□□□ -0
GPC1-209ENST00000495100 MYO6Q9UM54 1294 aa15.02■□□□□ -0
GPC1-209ENST00000495100 NPHP3-ACAD11A0A0J9YXS1 232 aa15.02□□□□□ -0.01
GPC1-209ENST00000495100 ESYT3A0FGR9 886 aa15.02□□□□□ -0.01
GPC1-209ENST00000495100 SORBS3O60504 671 aa15.02□□□□□ -0.01
GPC1-209ENST00000495100 GLIS3Q8NEA6 775 aa15.02□□□□□ -0.01
GPC1-209ENST00000495100 NKRFO15226 690 aaKnown RBP eCLIP15.01□□□□□ -0.01
GPC1-209ENST00000495100 GDF11O95390 407 aa15.01□□□□□ -0.01
GPC1-209ENST00000495100 MOCS3O95396 460 aa15.01□□□□□ -0.01
GPC1-209ENST00000495100 ATP1A1P05023 1023 aaKnown RBP15.01□□□□□ -0.01
GPC1-209ENST00000495100 ERCC5P28715 1186 aaPredicted RBP15.01□□□□□ -0.01
GPC1-209ENST00000495100 RASSF7Q02833 373 aa15.01□□□□□ -0.01
GPC1-209ENST00000495100 KRT79Q5XKE5 535 aa15.01□□□□□ -0.01
GPC1-209ENST00000495100 CDC23Q9UJX2 597 aa15.01□□□□□ -0.01
GPC1-209ENST00000495100 PCDHA4Q9UN74 947 aa15.01□□□□□ -0.01
GPC1-209ENST00000495100 FHOD1Q9Y613 1164 aa15.01□□□□□ -0.01
GPC1-209ENST00000495100 CNTNAP5Q8WYK1 1306 aa15.01□□□□□ -0.01
GPC1-209ENST00000495100 NDUFA10O95299 355 aa15.01□□□□□ -0.01
GPC1-209ENST00000495100 CDK8P49336 464 aa15.01□□□□□ -0.01
GPC1-209ENST00000495100 GUCY2FP51841 1108 aa15.01□□□□□ -0.01
GPC1-209ENST00000495100 MDM2Q00987 491 aaPredicted RBP15.01□□□□□ -0.01
GPC1-209ENST00000495100 SV2BQ7L1I2 683 aa15.01□□□□□ -0.01
GPC1-209ENST00000495100 TMTC1Q8IUR5 882 aa15.01□□□□□ -0.01
GPC1-209ENST00000495100 ARPP21Q9UBL0 812 aaPredicted RBP15.01□□□□□ -0.01
GPC1-209ENST00000495100 MORC2Q9Y6X9 1032 aaPredicted RBP15.01□□□□□ -0.01
GPC1-209ENST00000495100 AFDNP55196 1824 aaKnown RBP15.01□□□□□ -0.01
GPC1-209ENST00000495100 EIF3JO75822 258 aaKnown RBP15.01□□□□□ -0.01
GPC1-209ENST00000495100 BMP15O95972 392 aa15.01□□□□□ -0.01
GPC1-209ENST00000495100 LDHCP07864 332 aa15.01□□□□□ -0.01
GPC1-209ENST00000495100 OR52Z1P0C646 297 aa15.01□□□□□ -0.01
GPC1-209ENST00000495100 SP4Q02446 784 aa15.01□□□□□ -0.01
GPC1-209ENST00000495100 SPAG1Q07617 926 aa15.01□□□□□ -0.01
GPC1-209ENST00000495100 MKRN4PQ13434 485 aaPredicted RBP15.01□□□□□ -0.01
GPC1-209ENST00000495100 PFKFB3Q16875 520 aaPredicted RBP15.01□□□□□ -0.01
GPC1-209ENST00000495100 UTP14CQ5TAP6 766 aaKnown RBP15.01□□□□□ -0.01
GPC1-209ENST00000495100 SRGAP1Q7Z6B7 1085 aa15.01□□□□□ -0.01
GPC1-209ENST00000495100 KLHL7Q8IXQ5 586 aa15.01□□□□□ -0.01
GPC1-209ENST00000495100 IL17RBQ9NRM6 502 aa15.01□□□□□ -0.01
GPC1-209ENST00000495100 PHLPP2Q6ZVD8 1323 aa15□□□□□ -0.01
GPC1-209ENST00000495100 KRT86O43790 486 aa15□□□□□ -0.01
GPC1-209ENST00000495100 CYLC1P35663 651 aaPredicted RBP15□□□□□ -0.01
GPC1-209ENST00000495100 STAT3P40763 770 aa15□□□□□ -0.01
GPC1-209ENST00000495100 GPR161Q8N6U8 529 aaKnown RBP15□□□□□ -0.01
GPC1-209ENST00000495100 MTRQ99707 1265 aa15□□□□□ -0.01
GPC1-209ENST00000495100 SMIM23A6NLE4 172 aa15□□□□□ -0.01
GPC1-209ENST00000495100 ANKRD40Q6AI12 368 aa15□□□□□ -0.01
GPC1-209ENST00000495100 SND1Q7KZF4 910 aaKnown RBP eCLIP15□□□□□ -0.014e-6■■■■□ 23.4
GPC1-209ENST00000495100 PLCD3Q8N3E9 789 aa15□□□□□ -0.01
GPC1-209ENST00000495100 CEP112Q8N8E3 955 aa15□□□□□ -0.01
GPC1-209ENST00000495100 ANKRD2Q9GZV1 360 aa15□□□□□ -0.01
GPC1-209ENST00000495100 GGA1Q9UJY5 639 aa15□□□□□ -0.01
GPC1-209ENST00000495100 PCNTO95613 3336 aa15□□□□□ -0.01
GPC1-209ENST00000495100 A0A1B0GTH6 734 aa15□□□□□ -0.01
GPC1-209ENST00000495100 ATP2C1P98194 919 aaPredicted RBP15□□□□□ -0.01
GPC1-209ENST00000495100 NAA35Q5VZE5 725 aa15□□□□□ -0.01
GPC1-209ENST00000495100 IFIH1Q9BYX4 1025 aaKnown RBP15□□□□□ -0.01
GPC1-209ENST00000495100 MRFAP1Q9Y605 127 aa15□□□□□ -0.01
GPC1-209ENST00000495100 FTCDO95954 541 aa14.99□□□□□ -0.01
GPC1-209ENST00000495100 HOXA13P31271 388 aaPredicted RBP14.99□□□□□ -0.01
GPC1-209ENST00000495100 ATP1A2P50993 1020 aa14.99□□□□□ -0.01
GPC1-209ENST00000495100 SHROOM1Q2M3G4 852 aaPredicted RBP14.99□□□□□ -0.01
GPC1-209ENST00000495100 ZNF658Q5TYW1 1059 aaPredicted RBP14.99□□□□□ -0.01
GPC1-209ENST00000495100 SPAG5Q96R06 1193 aa14.99□□□□□ -0.01
GPC1-209ENST00000495100 NYXQ9GZU5 481 aa14.99□□□□□ -0.01
GPC1-209ENST00000495100 LACRTQ9GZZ8 138 aa14.99□□□□□ -0.01
GPC1-209ENST00000495100 ATP8A2Q9NTI2 1148 aa14.99□□□□□ -0.01
GPC1-209ENST00000495100 USP40Q9NVE5 1235 aa14.99□□□□□ -0.01
GPC1-209ENST00000495100 SAR1BQ9Y6B6 198 aa14.99□□□□□ -0.01
GPC1-209ENST00000495100 CYTH3O43739 400 aa14.99□□□□□ -0.01
GPC1-209ENST00000495100 NEK8Q86SG6 692 aa14.99□□□□□ -0.01
GPC1-209ENST00000495100 KIAA1024Q9UPX6 916 aa14.99□□□□□ -0.01
GPC1-209ENST00000495100 PNPLA7Q6ZV29 1317 aa14.99□□□□□ -0.01
GPC1-209ENST00000495100 EP400Q96L91 3159 aa14.99□□□□□ -0.01
GPC1-209ENST00000495100 GNA11P29992 359 aa14.99□□□□□ -0.01
GPC1-209ENST00000495100 PABPC4Q13310 644 aaKnown RBP eCLIP14.99□□□□□ -0.01
GPC1-209ENST00000495100 MMS19Q96T76 1030 aa14.99□□□□□ -0.01
GPC1-209ENST00000495100 PCDHA6Q9UN73 950 aa14.99□□□□□ -0.01
GPC1-209ENST00000495100 PCDHA8Q9Y5H6 950 aa14.99□□□□□ -0.01
GPC1-209ENST00000495100 DDAH1O94760 285 aa14.98□□□□□ -0.01
GPC1-209ENST00000495100 MAGEA1P43355 309 aa14.98□□□□□ -0.01
GPC1-209ENST00000495100 POLR2FP61218 127 aaKnown RBP14.98□□□□□ -0.01
GPC1-209ENST00000495100 PRR16Q569H4 304 aa14.98□□□□□ -0.01
GPC1-209ENST00000495100 TRIML1Q8N9V2 468 aa14.98□□□□□ -0.01
GPC1-209ENST00000495100 USP21Q9UK80 565 aa14.98□□□□□ -0.01
GPC1-209ENST00000495100 HYOU1Q9Y4L1 999 aa14.98□□□□□ -0.01
GPC1-209ENST00000495100 PCDHB13Q9Y5F0 798 aa14.98□□□□□ -0.01
GPC1-209ENST00000495100 STK36Q9NRP7 1315 aa14.98□□□□□ -0.01
GPC1-209ENST00000495100 E9PMD0 336 aa14.98□□□□□ -0.01
GPC1-209ENST00000495100 USO1O60763 962 aaKnown RBP14.98□□□□□ -0.01
GPC1-209ENST00000495100 TRIM37O94972 964 aa14.98□□□□□ -0.01
GPC1-209ENST00000495100 GABPB1Q06547 395 aaPredicted RBP14.98□□□□□ -0.01
GPC1-209ENST00000495100 ZSCAN26Q16670 478 aa14.98□□□□□ -0.01
GPC1-209ENST00000495100 RBM26Q5T8P6 1007 aaKnown RBP14.98□□□□□ -0.01
GPC1-209ENST00000495100 WDR66Q8TBY9 1149 aa14.98□□□□□ -0.01
GPC1-209ENST00000495100 CLIC2O15247 247 aa14.97□□□□□ -0.01
GPC1-209ENST00000495100 KIF20AO95235 890 aa14.97□□□□□ -0.01
GPC1-209ENST00000495100 ZNF18P17022 549 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms