RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 CD2BP2O95400 341 aaKnown RBP22.41■■□□□ 1.18
PCOLCE-208ENST00000487172 SLC4A3P48751 1232 aa22.41■■□□□ 1.18
PCOLCE-208ENST00000487172 PRMT2P55345 433 aa22.41■■□□□ 1.18
PCOLCE-208ENST00000487172 WDR78Q5VTH9 848 aa22.41■■□□□ 1.18
PCOLCE-208ENST00000487172 NECAB1Q8N987 351 aa22.41■■□□□ 1.18
PCOLCE-208ENST00000487172 CWC22Q9HCG8 908 aaKnown RBP22.41■■□□□ 1.18
PCOLCE-208ENST00000487172 MRPL11Q9Y3B7 192 aaKnown RBP22.41■■□□□ 1.18
PCOLCE-208ENST00000487172 IVNS1ABPQ9Y6Y0 642 aa22.41■■□□□ 1.18
PCOLCE-208ENST00000487172 PCNTO95613 3336 aa22.41■■□□□ 1.18
PCOLCE-208ENST00000487172 DOCK3Q8IZD9 2030 aa22.41■■□□□ 1.18
PCOLCE-208ENST00000487172 hCG_1984214I3L0E3 225 aa22.4■■□□□ 1.18
PCOLCE-208ENST00000487172 FCER1AP12319 257 aa22.4■■□□□ 1.18
PCOLCE-208ENST00000487172 GRB14Q14449 540 aa22.4■■□□□ 1.18
PCOLCE-208ENST00000487172 USH1GQ495M9 461 aa22.4■■□□□ 1.18
PCOLCE-208ENST00000487172 MORN1Q5T089 497 aa22.4■■□□□ 1.18
PCOLCE-208ENST00000487172 OTOP1Q7RTM1 612 aa22.4■■□□□ 1.18
PCOLCE-208ENST00000487172 ZNF713Q8N859 430 aaPredicted RBP22.4■■□□□ 1.18
PCOLCE-208ENST00000487172 RGS22Q8NE09 1264 aa22.4■■□□□ 1.18
PCOLCE-208ENST00000487172 SOCS4Q8WXH5 440 aa22.4■■□□□ 1.18
PCOLCE-208ENST00000487172 CLEC4DQ8WXI8 215 aa22.4■■□□□ 1.18
PCOLCE-208ENST00000487172 PIBF1Q8WXW3 757 aa22.4■■□□□ 1.18
PCOLCE-208ENST00000487172 NUDT12Q9BQG2 462 aa22.4■■□□□ 1.18
PCOLCE-208ENST00000487172 SRRDQ9UH36 339 aa22.4■■□□□ 1.18
PCOLCE-208ENST00000487172 PCDHA1Q9Y5I3 950 aa22.4■■□□□ 1.18
PCOLCE-208ENST00000487172 ECM2O94769 699 aaPredicted RBP22.39■■□□□ 1.17
PCOLCE-208ENST00000487172 AKAP17AQ02040 695 aaKnown RBP22.39■■□□□ 1.17
PCOLCE-208ENST00000487172 SSRP1Q08945 709 aaKnown RBP22.39■■□□□ 1.17
PCOLCE-208ENST00000487172 KCTD2Q14681 263 aa22.39■■□□□ 1.17
PCOLCE-208ENST00000487172 MUM1L1Q5H9M0 696 aa22.39■■□□□ 1.17
PCOLCE-208ENST00000487172 USP6NLQ92738 828 aa22.39■■□□□ 1.17
PCOLCE-208ENST00000487172 PHKBQ93100 1093 aa22.39■■□□□ 1.17
PCOLCE-208ENST00000487172 MMP19Q99542 508 aa22.39■■□□□ 1.17
PCOLCE-208ENST00000487172 TRIM17Q9Y577 477 aa22.39■■□□□ 1.17
PCOLCE-208ENST00000487172 ZNFX1Q9P2E3 1918 aaKnown RBP22.39■■□□□ 1.17
PCOLCE-208ENST00000487172 PLXNB2O15031 1838 aa22.38■■□□□ 1.17
PCOLCE-208ENST00000487172 ZNF236Q9UL36 1845 aa22.38■■□□□ 1.17
PCOLCE-208ENST00000487172 hCG_1642624A0A1W2PR95 340 aa22.38■■□□□ 1.17
PCOLCE-208ENST00000487172 CTDNEP1O95476 244 aa22.38■■□□□ 1.17
PCOLCE-208ENST00000487172 TAL1P17542 331 aaPredicted RBP22.38■■□□□ 1.17
PCOLCE-208ENST00000487172 ST3GAL1Q11201 340 aa22.38■■□□□ 1.17
PCOLCE-208ENST00000487172 PKN1Q16512 942 aa22.38■■□□□ 1.17
PCOLCE-208ENST00000487172 PFKFB3Q16875 520 aaPredicted RBP22.38■■□□□ 1.17
PCOLCE-208ENST00000487172 CTU1Q7Z7A3 348 aaKnown RBP22.38■■□□□ 1.17
PCOLCE-208ENST00000487172 TRIM22Q8IYM9 498 aa22.38■■□□□ 1.17
PCOLCE-208ENST00000487172 SAMD3Q8N6K7 520 aa22.38■■□□□ 1.17
PCOLCE-208ENST00000487172 SLC26A6Q9BXS9 759 aa22.38■■□□□ 1.17
PCOLCE-208ENST00000487172 HOMER2Q9NSB8 354 aa22.38■■□□□ 1.17
PCOLCE-208ENST00000487172 STK36Q9NRP7 1315 aa22.37■■□□□ 1.17
PCOLCE-208ENST00000487172 MAP2K5Q13163 448 aa22.37■■□□□ 1.17
PCOLCE-208ENST00000487172 IRF5Q13568 498 aa22.37■■□□□ 1.17
PCOLCE-208ENST00000487172 MCF2L2Q86YR7 1114 aa22.37■■□□□ 1.17
PCOLCE-208ENST00000487172 ANKRD35Q8N283 1001 aa22.37■■□□□ 1.17
PCOLCE-208ENST00000487172 SNX21Q969T3 373 aa22.37■■□□□ 1.17
PCOLCE-208ENST00000487172 TMX3Q96JJ7 454 aa22.37■■□□□ 1.17
PCOLCE-208ENST00000487172 LLPHQ9BRT6 129 aaKnown RBP22.37■■□□□ 1.17
PCOLCE-208ENST00000487172 PFASO15067 1338 aa22.36■■□□□ 1.17
PCOLCE-208ENST00000487172 DNAJC25-GNG10A0A024R161 153 aa22.36■■□□□ 1.17
PCOLCE-208ENST00000487172 NFIBO00712 420 aa22.36■■□□□ 1.17
PCOLCE-208ENST00000487172 DEXIO95424 95 aa22.36■■□□□ 1.17
PCOLCE-208ENST00000487172 HOXC6P09630 235 aa22.36■■□□□ 1.17
PCOLCE-208ENST00000487172 SCG2P13521 617 aa22.36■■□□□ 1.17
PCOLCE-208ENST00000487172 ADORA2AP29274 412 aa22.36■■□□□ 1.17
PCOLCE-208ENST00000487172 FLT3LGP49771 235 aa22.36■■□□□ 1.17
PCOLCE-208ENST00000487172 GHRHRQ02643 423 aa22.36■■□□□ 1.17
PCOLCE-208ENST00000487172 PRKCZQ05513 592 aa22.36■■□□□ 1.17
PCOLCE-208ENST00000487172 PKN2Q16513 984 aaKnown RBP22.36■■□□□ 1.17
PCOLCE-208ENST00000487172 NSUN7Q8NE18 718 aaKnown RBP22.36■■□□□ 1.17
PCOLCE-208ENST00000487172 A1CFQ9NQ94 594 aaKnown RBP22.36■■□□□ 1.17
PCOLCE-208ENST00000487172 MAP3K20Q9NYL2 800 aaKnown RBP22.36■■□□□ 1.17
PCOLCE-208ENST00000487172 GABRQQ9UN88 632 aa22.36■■□□□ 1.17
PCOLCE-208ENST00000487172 XRCC5P13010 732 aaKnown RBP22.35■■□□□ 1.17
PCOLCE-208ENST00000487172 RGS2P41220 211 aa22.35■■□□□ 1.17
PCOLCE-208ENST00000487172 WWC2Q6AWC2 1192 aa22.35■■□□□ 1.17
PCOLCE-208ENST00000487172 PPP1R18Q6NYC8 613 aa22.35■■□□□ 1.17
PCOLCE-208ENST00000487172 CCDC83Q8IWF9 413 aa22.35■■□□□ 1.17
PCOLCE-208ENST00000487172 DDX11Q96FC9 970 aa22.35■■□□□ 1.17
PCOLCE-208ENST00000487172 BARHL2Q9NY43 387 aa22.35■■□□□ 1.17
PCOLCE-208ENST00000487172 SLC5A4Q9NY91 659 aa22.35■■□□□ 1.17
PCOLCE-208ENST00000487172 DIS3Q9Y2L1 958 aaKnown RBP22.35■■□□□ 1.17
PCOLCE-208ENST00000487172 PTPN22Q9Y2R2 807 aa22.35■■□□□ 1.17
PCOLCE-208ENST00000487172 OPLAHO14841 1288 aa22.34■■□□□ 1.17
PCOLCE-208ENST00000487172 RNF207Q6ZRF8 634 aa22.34■■□□□ 1.17
PCOLCE-208ENST00000487172 HEATR3Q7Z4Q2 680 aa22.34■■□□□ 1.17
PCOLCE-208ENST00000487172 DPP9Q86TI2 863 aa22.34■■□□□ 1.17
PCOLCE-208ENST00000487172 TEX2Q8IWB9 1127 aa22.34■■□□□ 1.17
PCOLCE-208ENST00000487172 SMARCC2Q8TAQ2 1214 aa22.34■■□□□ 1.17
PCOLCE-208ENST00000487172 CYP39A1Q9NYL5 469 aa22.34■■□□□ 1.17
PCOLCE-208ENST00000487172 STXBP3O00186 592 aa22.33■■□□□ 1.17
PCOLCE-208ENST00000487172 COBLO75128 1261 aa22.33■■□□□ 1.17
PCOLCE-208ENST00000487172 PPFIA3O75145 1194 aa22.33■■□□□ 1.17
PCOLCE-208ENST00000487172 BAATQ14032 418 aaPredicted RBP22.33■■□□□ 1.17
PCOLCE-208ENST00000487172 ZNF792Q3KQV3 632 aa22.33■■□□□ 1.17
PCOLCE-208ENST00000487172 NSMFQ6X4W1 530 aa22.33■■□□□ 1.17
PCOLCE-208ENST00000487172 FAM177A1Q8N128 213 aaPredicted RBP22.33■■□□□ 1.17
PCOLCE-208ENST00000487172 FAM133AQ8N9E0 248 aa22.33■■□□□ 1.17
PCOLCE-208ENST00000487172 GPKOWQ92917 476 aaPredicted RBP eCLIP22.33■■□□□ 1.17
PCOLCE-208ENST00000487172 SH3GLB2Q9NR46 395 aa22.33■■□□□ 1.17
PCOLCE-208ENST00000487172 FDPSP14324 419 aaKnown RBP22.32■■□□□ 1.16
PCOLCE-208ENST00000487172 CYP2B6P20813 491 aa22.32■■□□□ 1.16
PCOLCE-208ENST00000487172 RPS6P62753 249 aaKnown RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms