RNA–Protein interactions for RNA: ENST00000478085.5

SGSM3-209, Transcript of small G protein signaling modulator 3, humanhuman

TSL 2

Gene SGSM3, Length 4,218 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-209ENST00000478085 PAF1Q8N7H5 531 aa13.21□□□□□ -0.3
SGSM3-209ENST00000478085 CENPHQ9H3R5 247 aa13.21□□□□□ -0.3
SGSM3-209ENST00000478085 MTMR4Q9NYA4 1195 aa13.21□□□□□ -0.3
SGSM3-209ENST00000478085 NWD1Q149M9 1564 aa13.2□□□□□ -0.3
SGSM3-209ENST00000478085 EIF2AK2P19525 551 aaKnown RBP13.2□□□□□ -0.3
SGSM3-209ENST00000478085 RASA1P20936 1047 aa13.2□□□□□ -0.3
SGSM3-209ENST00000478085 USP14P54578 494 aa13.2□□□□□ -0.3
SGSM3-209ENST00000478085 NFIAQ12857 509 aa13.2□□□□□ -0.3
SGSM3-209ENST00000478085 C11orf57Q6ZUT1 292 aaPredicted RBP13.2□□□□□ -0.3
SGSM3-209ENST00000478085 CCDC84Q86UT8 332 aaPredicted RBP13.2□□□□□ -0.3
SGSM3-209ENST00000478085 ALS2CR12Q96Q35 445 aa13.2□□□□□ -0.3
SGSM3-209ENST00000478085 RIOK1Q9BRS2 568 aaKnown RBP13.2□□□□□ -0.3
SGSM3-209ENST00000478085 TMEM260Q9NX78 707 aa13.2□□□□□ -0.3
SGSM3-209ENST00000478085 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.2□□□□□ -0.3
SGSM3-209ENST00000478085 SLFN14P0C7P3 912 aa13.2□□□□□ -0.3
SGSM3-209ENST00000478085 CASP1P29466 404 aa13.2□□□□□ -0.3
SGSM3-209ENST00000478085 BIRC3Q13489 604 aa13.2□□□□□ -0.3
SGSM3-209ENST00000478085 XKR9Q5GH70 373 aa13.2□□□□□ -0.3
SGSM3-209ENST00000478085 FAM170AA1A519 330 aa13.2□□□□□ -0.3
SGSM3-209ENST00000478085 ERLIN1O75477 346 aa13.2□□□□□ -0.3
SGSM3-209ENST00000478085 KIF5AQ12840 1032 aa13.2□□□□□ -0.3
SGSM3-209ENST00000478085 GRM4Q14833 912 aa13.2□□□□□ -0.3
SGSM3-209ENST00000478085 AXDND1Q5T1B0 1012 aaPredicted RBP13.2□□□□□ -0.3
SGSM3-209ENST00000478085 IQCEQ6IPM2 695 aa13.2□□□□□ -0.3
SGSM3-209ENST00000478085 HHIPL2Q6UWX4 724 aa13.2□□□□□ -0.3
SGSM3-209ENST00000478085 DPH6Q7L8W6 267 aa13.2□□□□□ -0.3
SGSM3-209ENST00000478085 ZNF577Q9BSK1 485 aa13.2□□□□□ -0.3
SGSM3-209ENST00000478085 IMPG2Q9BZV3 1241 aa13.2□□□□□ -0.3
SGSM3-209ENST00000478085 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.2□□□□□ -0.32e-6■■■■■ 72.5
SGSM3-209ENST00000478085 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.2□□□□□ -0.3
SGSM3-209ENST00000478085 MYO6Q9UM54 1294 aa13.2□□□□□ -0.3
SGSM3-209ENST00000478085 V9GYY5 206 aaPredicted RBP13.2□□□□□ -0.3
SGSM3-209ENST00000478085 PLSCR1O15162 318 aa13.19□□□□□ -0.3
SGSM3-209ENST00000478085 QRICH1Q2TAL8 776 aa13.19□□□□□ -0.3
SGSM3-209ENST00000478085 SAMD7Q7Z3H4 446 aa13.19□□□□□ -0.3
SGSM3-209ENST00000478085 ADGRF4Q8IZF3 695 aa13.19□□□□□ -0.3
SGSM3-209ENST00000478085 DKC1O60832 514 aaKnown RBP eCLIP13.19□□□□□ -0.3
SGSM3-209ENST00000478085 ADKP55263 362 aaKnown RBP13.19□□□□□ -0.3
SGSM3-209ENST00000478085 RCSD1Q6JBY9 416 aa13.19□□□□□ -0.3
SGSM3-209ENST00000478085 FNBP1Q96RU3 617 aa13.19□□□□□ -0.3
SGSM3-209ENST00000478085 FAM207AQ9NSI2 230 aaPredicted RBP13.19□□□□□ -0.3
SGSM3-209ENST00000478085 KDM3AQ9Y4C1 1321 aa13.19□□□□□ -0.3
SGSM3-209ENST00000478085 FAM205CA6NFA0 338 aa13.19□□□□□ -0.3
SGSM3-209ENST00000478085 UBE2Q2LH0YL09 131 aa13.19□□□□□ -0.3
SGSM3-209ENST00000478085 CCDC172P0C7W6 258 aa13.19□□□□□ -0.3
SGSM3-209ENST00000478085 PTPREP23469 700 aa13.19□□□□□ -0.3
SGSM3-209ENST00000478085 RDXP35241 583 aaKnown RBP13.19□□□□□ -0.3
SGSM3-209ENST00000478085 RSBN1LQ6PCB5 846 aaPredicted RBP13.19□□□□□ -0.3
SGSM3-209ENST00000478085 SYT10Q6XYQ8 523 aa13.19□□□□□ -0.3
SGSM3-209ENST00000478085 MYOCDQ8IZQ8 938 aa13.19□□□□□ -0.3
SGSM3-209ENST00000478085 TEKT3Q9BXF9 490 aa13.19□□□□□ -0.3
SGSM3-209ENST00000478085 ANO3Q9BYT9 981 aa13.19□□□□□ -0.3
SGSM3-209ENST00000478085 FDPSP14324 419 aaKnown RBP13.18□□□□□ -0.3
SGSM3-209ENST00000478085 LRMPQ12912 555 aa13.18□□□□□ -0.3
SGSM3-209ENST00000478085 LRRC41Q15345 812 aa13.18□□□□□ -0.3
SGSM3-209ENST00000478085 FAM26FQ5R3K3 315 aa13.18□□□□□ -0.3
SGSM3-209ENST00000478085 LARP4BQ92615 738 aaKnown RBP13.18□□□□□ -0.3
SGSM3-209ENST00000478085 PRMT6Q96LA8 375 aaPredicted RBP13.18□□□□□ -0.3
SGSM3-209ENST00000478085 PANK4Q9NVE7 773 aa13.18□□□□□ -0.3
SGSM3-209ENST00000478085 CCDC66A2RUB6 948 aa13.18□□□□□ -0.3
SGSM3-209ENST00000478085 CTDNEP1O95476 244 aa13.18□□□□□ -0.3
SGSM3-209ENST00000478085 NT5C2P49902 561 aa13.18□□□□□ -0.3
SGSM3-209ENST00000478085 CBX1P83916 185 aa13.18□□□□□ -0.3
SGSM3-209ENST00000478085 NCBP1Q09161 790 aaKnown RBP13.18□□□□□ -0.3
SGSM3-209ENST00000478085 VGLL2Q8N8G2 317 aa13.18□□□□□ -0.3
SGSM3-209ENST00000478085 CTNNBL1Q8WYA6 563 aaPredicted RBP13.18□□□□□ -0.3
SGSM3-209ENST00000478085 SUGCTQ9HAC7 445 aa13.18□□□□□ -0.3
SGSM3-209ENST00000478085 NLRC4Q9NPP4 1024 aa13.18□□□□□ -0.3
SGSM3-209ENST00000478085 STK36Q9NRP7 1315 aa13.18□□□□□ -0.3
SGSM3-209ENST00000478085 MCM6Q14566 821 aa13.18□□□□□ -0.3
SGSM3-209ENST00000478085 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.18□□□□□ -0.3
SGSM3-209ENST00000478085 GSDMAQ96QA5 445 aa13.18□□□□□ -0.3
SGSM3-209ENST00000478085 TMEM39BQ9GZU3 492 aa13.18□□□□□ -0.3
SGSM3-209ENST00000478085 RAVER2Q9HCJ3 691 aaKnown RBP13.18□□□□□ -0.3
SGSM3-209ENST00000478085 MON2Q7Z3U7 1717 aa13.18□□□□□ -0.3
SGSM3-209ENST00000478085 LAD1O00515 517 aa13.18□□□□□ -0.3
SGSM3-209ENST00000478085 ERLIN2O94905 339 aa13.18□□□□□ -0.3
SGSM3-209ENST00000478085 CETN2P41208 172 aa13.18□□□□□ -0.3
SGSM3-209ENST00000478085 FAM102BQ5T8I3 360 aa13.18□□□□□ -0.3
SGSM3-209ENST00000478085 TAF3Q5VWG9 929 aa13.18□□□□□ -0.3
SGSM3-209ENST00000478085 FAM160B2Q86V87 743 aa13.18□□□□□ -0.3
SGSM3-209ENST00000478085 FAM178BQ8IXR5 827 aa13.18□□□□□ -0.3
SGSM3-209ENST00000478085 CRACR2AQ9BSW2 395 aa13.18□□□□□ -0.3
SGSM3-209ENST00000478085 CCDC94Q9BW85 323 aaPredicted RBP13.18□□□□□ -0.3
SGSM3-209ENST00000478085 GCFC2P16383 781 aaKnown RBP13.17□□□□□ -0.3
SGSM3-209ENST00000478085 CYP2J2P51589 502 aa13.17□□□□□ -0.3
SGSM3-209ENST00000478085 PPP4CP60510 307 aa13.17□□□□□ -0.3
SGSM3-209ENST00000478085 KRT83P78385 493 aa13.17□□□□□ -0.3
SGSM3-209ENST00000478085 KCTD2Q14681 263 aa13.17□□□□□ -0.3
SGSM3-209ENST00000478085 SMAP1Q8IYB5 467 aaPredicted RBP13.17□□□□□ -0.3
SGSM3-209ENST00000478085 RGS22Q8NE09 1264 aa13.17□□□□□ -0.3
SGSM3-209ENST00000478085 SLC10A4Q96EP9 437 aa13.17□□□□□ -0.3
SGSM3-209ENST00000478085 POLD4Q9HCU8 107 aa13.17□□□□□ -0.3
SGSM3-209ENST00000478085 PRDM10Q9NQV6 1147 aa13.17□□□□□ -0.3
SGSM3-209ENST00000478085 ZNF70Q9UC06 446 aaPredicted RBP13.17□□□□□ -0.3
SGSM3-209ENST00000478085 HERC5Q9UII4 1024 aaKnown RBP13.17□□□□□ -0.3
SGSM3-209ENST00000478085 STK24Q9Y6E0 443 aa13.17□□□□□ -0.3
SGSM3-209ENST00000478085 PLCG1P19174 1290 aa13.17□□□□□ -0.3
SGSM3-209ENST00000478085 IREB2P48200 963 aaKnown RBP13.17□□□□□ -0.3
SGSM3-209ENST00000478085 RCAN1P53805 252 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms