RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 PPP1R37O75864 691 aa15.31■□□□□ 0.04
NPHP4-207ENST00000470763 TRIM37O94972 964 aa15.31■□□□□ 0.04
NPHP4-207ENST00000470763 HPDP32754 393 aaPredicted RBP15.31■□□□□ 0.04
NPHP4-207ENST00000470763 DNA2P51530 1060 aa15.31■□□□□ 0.04
NPHP4-207ENST00000470763 MEA1Q16626 185 aa15.31■□□□□ 0.04
NPHP4-207ENST00000470763 PTGISQ16647 500 aa15.31■□□□□ 0.04
NPHP4-207ENST00000470763 CFAP58Q5T655 872 aa15.31■□□□□ 0.04
NPHP4-207ENST00000470763 RPAINQ86UA6 219 aa15.31■□□□□ 0.04
NPHP4-207ENST00000470763 MYCBPAPQ8TBZ2 947 aa15.31■□□□□ 0.04
NPHP4-207ENST00000470763 OSBPL9Q96SU4 736 aa15.31■□□□□ 0.04
NPHP4-207ENST00000470763 RBM12Q9NTZ6 932 aaKnown RBP15.31■□□□□ 0.04
NPHP4-207ENST00000470763 C21orf2O43822 256 aa15.31■□□□□ 0.04
NPHP4-207ENST00000470763 CSB-PGBD3P0DP91 1061 aa15.31■□□□□ 0.04
NPHP4-207ENST00000470763 KRT2P35908 639 aa15.31■□□□□ 0.04
NPHP4-207ENST00000470763 CARSP49589 748 aaKnown RBP15.31■□□□□ 0.04
NPHP4-207ENST00000470763 PREPLQ4J6C6 727 aaPredicted RBP15.31■□□□□ 0.04
NPHP4-207ENST00000470763 METTL24Q5JXM2 366 aa15.31■□□□□ 0.04
NPHP4-207ENST00000470763 AKNAD1Q5T1N1 836 aa15.31■□□□□ 0.04
NPHP4-207ENST00000470763 NLRP14Q86W24 1093 aa15.31■□□□□ 0.04
NPHP4-207ENST00000470763 ZNF654Q8IZM8 581 aa15.31■□□□□ 0.04
NPHP4-207ENST00000470763 STAG1Q8WVM7 1258 aa15.31■□□□□ 0.04
NPHP4-207ENST00000470763 TRIM47Q96LD4 638 aa15.31■□□□□ 0.04
NPHP4-207ENST00000470763 PURBQ96QR8 312 aaKnown RBP15.31■□□□□ 0.04
NPHP4-207ENST00000470763 PPANQ9NQ55 473 aaKnown RBP15.31■□□□□ 0.04
NPHP4-207ENST00000470763 DISP2A7MBM2 1401 aa15.31■□□□□ 0.04
NPHP4-207ENST00000470763 SCN11AQ9UI33 1791 aa15.31■□□□□ 0.04
NPHP4-207ENST00000470763 AKAP11Q9UKA4 1901 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 H7C1D1 291 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 PRKAB2O43741 272 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 GTPBP6O43824 516 aaPredicted RBP15.3■□□□□ 0.04
NPHP4-207ENST00000470763 ZPR1O75312 459 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 MBD4O95243 580 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 VAV2P52735 878 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 PPP2R5AQ15172 486 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 KDM7AQ6ZMT4 941 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 IQCA1Q86XH1 822 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 SPATS2Q86XZ4 545 aaKnown RBP15.3■□□□□ 0.04
NPHP4-207ENST00000470763 ANKRD13CQ8N6S4 541 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 ZNF622Q969S3 477 aaKnown RBP eCLIP15.3■□□□□ 0.04
NPHP4-207ENST00000470763 MIEF2Q96C03 454 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 MS4A14Q96JA4 679 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 ARMT1Q9H993 441 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.3■□□□□ 0.04
NPHP4-207ENST00000470763 ERICH2A1L162 156 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 RASSF10A6NK89 507 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 TACC1O75410 805 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 RASSF9O75901 435 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 CDR1P51861 262 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 SMTNP53814 917 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 TTC38Q5R3I4 469 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 KIRREL3Q8IZU9 778 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 TRIM58Q8NG06 486 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 VEZTQ9HBM0 779 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 CHD4Q14839 1912 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 PDS5AQ29RF7 1337 aaKnown RBP15.3■□□□□ 0.04
NPHP4-207ENST00000470763 TJP1Q07157 1748 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 A0A1W2PQC6 194 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 GLI1P08151 1106 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 EN1Q05925 392 aaPredicted RBP15.3■□□□□ 0.04
NPHP4-207ENST00000470763 E2F5Q15329 346 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 SPA17Q15506 151 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 SPRED3Q2MJR0 410 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 CCDC42Q96M95 316 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 SCLT1Q96NL6 688 aa15.3■□□□□ 0.04
NPHP4-207ENST00000470763 CCDC189A1A4V9 331 aa15.29■□□□□ 0.04
NPHP4-207ENST00000470763 ATP2C2O75185 946 aa15.29■□□□□ 0.04
NPHP4-207ENST00000470763 TYW1BQ6NUM6 668 aa15.29■□□□□ 0.04
NPHP4-207ENST00000470763 PKD1L3Q7Z443 1732 aa15.29■□□□□ 0.04
NPHP4-207ENST00000470763 CAVIN3Q969G5 261 aa15.29■□□□□ 0.04
NPHP4-207ENST00000470763 FAM89AQ96GI7 184 aa15.29■□□□□ 0.04
NPHP4-207ENST00000470763 CCDC114Q96M63 670 aa15.29■□□□□ 0.04
NPHP4-207ENST00000470763 IFIH1Q9BYX4 1025 aaKnown RBP15.29■□□□□ 0.04
NPHP4-207ENST00000470763 A6NNZ2 444 aa15.29■□□□□ 0.04
NPHP4-207ENST00000470763 BACH1O14867 736 aa15.29■□□□□ 0.04
NPHP4-207ENST00000470763 PAX7P23759 505 aa15.29■□□□□ 0.04
NPHP4-207ENST00000470763 MCM7P33993 719 aa15.29■□□□□ 0.04
NPHP4-207ENST00000470763 TBC1D8BQ0IIM8 1120 aa15.29■□□□□ 0.04
NPHP4-207ENST00000470763 UBE3CQ15386 1083 aa15.29■□□□□ 0.04
NPHP4-207ENST00000470763 TUBB8Q3ZCM7 444 aa15.29■□□□□ 0.04
NPHP4-207ENST00000470763 ZNF662Q6ZS27 426 aa15.29■□□□□ 0.04
NPHP4-207ENST00000470763 UBAC1Q9BSL1 405 aa15.29■□□□□ 0.04
NPHP4-207ENST00000470763 MAGEC2Q9UBF1 373 aaPredicted RBP15.29■□□□□ 0.04
NPHP4-207ENST00000470763 ADAMTS7Q9UKP4 1686 aa15.29■□□□□ 0.04
NPHP4-207ENST00000470763 BAG6P46379 1132 aa15.28■□□□□ 0.04
NPHP4-207ENST00000470763 GUCY2DQ02846 1103 aa15.28■□□□□ 0.04
NPHP4-207ENST00000470763 DDB1Q16531 1140 aa15.28■□□□□ 0.04
NPHP4-207ENST00000470763 YTHDF3Q7Z739 585 aaKnown RBP15.28■□□□□ 0.04
NPHP4-207ENST00000470763 PLIN2Q99541 437 aa15.28■□□□□ 0.04
NPHP4-207ENST00000470763 TUBGCP2Q9BSJ2 902 aa15.28■□□□□ 0.04
NPHP4-207ENST00000470763 TTYH3Q9C0H2 523 aa15.28■□□□□ 0.04
NPHP4-207ENST00000470763 DDX20Q9UHI6 824 aaKnown RBP15.28■□□□□ 0.04
NPHP4-207ENST00000470763 V9GY48 417 aaPredicted RBP15.28■□□□□ 0.04
NPHP4-207ENST00000470763 NKRFO15226 690 aaKnown RBP eCLIP15.28■□□□□ 0.04
NPHP4-207ENST00000470763 PKN1Q16512 942 aa15.28■□□□□ 0.04
NPHP4-207ENST00000470763 IL17AQ16552 155 aa15.28■□□□□ 0.04
NPHP4-207ENST00000470763 CCDC170Q8IYT3 715 aa15.28■□□□□ 0.04
NPHP4-207ENST00000470763 IQCKQ8N0W5 287 aa15.28■□□□□ 0.04
NPHP4-207ENST00000470763 SYNE4Q8N205 404 aa15.28■□□□□ 0.04
NPHP4-207ENST00000470763 KRT23Q9C075 422 aa15.28■□□□□ 0.04
NPHP4-207ENST00000470763 SLC24A3Q9HC58 644 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms