RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 PLEKHH3Q7Z736 793 aa17.32■□□□□ 0.36
CDC42SE1-203ENST00000470278 CCAR1Q8IX12 1150 aaKnown RBP17.32■□□□□ 0.36
CDC42SE1-203ENST00000470278 CHST13Q8NET6 341 aa17.32■□□□□ 0.36
CDC42SE1-203ENST00000470278 COA7Q96BR5 231 aa17.32■□□□□ 0.36
CDC42SE1-203ENST00000470278 AGBL1Q96MI9 1066 aa17.32■□□□□ 0.36
CDC42SE1-203ENST00000470278 PRO3102Q9H379 93 aa17.32■□□□□ 0.36
CDC42SE1-203ENST00000470278 CCPG1Q9ULG6 757 aa17.32■□□□□ 0.36
CDC42SE1-203ENST00000470278 NAP1L2Q9ULW6 460 aaPredicted RBP17.32■□□□□ 0.36
CDC42SE1-203ENST00000470278 RIPK3Q9Y572 518 aa17.32■□□□□ 0.36
CDC42SE1-203ENST00000470278 COL6A3P12111 3177 aa17.32■□□□□ 0.36
CDC42SE1-203ENST00000470278 STRNO43815 780 aa17.31■□□□□ 0.36
CDC42SE1-203ENST00000470278 ST18O60284 1047 aa17.31■□□□□ 0.36
CDC42SE1-203ENST00000470278 HOXD10P28358 340 aa17.31■□□□□ 0.36
CDC42SE1-203ENST00000470278 GJA8P48165 433 aa17.31■□□□□ 0.36
CDC42SE1-203ENST00000470278 SNAP25P60880 206 aa17.31■□□□□ 0.36
CDC42SE1-203ENST00000470278 TRAF1Q13077 416 aa17.31■□□□□ 0.36
CDC42SE1-203ENST00000470278 GRB14Q14449 540 aa17.31■□□□□ 0.36
CDC42SE1-203ENST00000470278 NCAPG2Q86XI2 1143 aa17.31■□□□□ 0.36
CDC42SE1-203ENST00000470278 RRP36Q96EU6 259 aaKnown RBP17.31■□□□□ 0.36
CDC42SE1-203ENST00000470278 MAF1Q9H063 256 aa17.31■□□□□ 0.36
CDC42SE1-203ENST00000470278 UNC93B1Q9H1C4 597 aa17.31■□□□□ 0.36
CDC42SE1-203ENST00000470278 PNMA6FA0A0J9YX94 578 aa17.3■□□□□ 0.36
CDC42SE1-203ENST00000470278 SLC15A5A6NIM6 579 aa17.3■□□□□ 0.36
CDC42SE1-203ENST00000470278 PFKFB2O60825 505 aa17.3■□□□□ 0.36
CDC42SE1-203ENST00000470278 GJB1P08034 283 aa17.3■□□□□ 0.36
CDC42SE1-203ENST00000470278 PTPREP23469 700 aa17.3■□□□□ 0.36
CDC42SE1-203ENST00000470278 NTRK3Q16288 839 aa17.3■□□□□ 0.36
CDC42SE1-203ENST00000470278 MORN1Q5T089 497 aa17.3■□□□□ 0.36
CDC42SE1-203ENST00000470278 FBXO11Q86XK2 927 aa17.3■□□□□ 0.36
CDC42SE1-203ENST00000470278 PIGSQ96S52 555 aa17.3■□□□□ 0.36
CDC42SE1-203ENST00000470278 AMNQ9BXJ7 453 aa17.3■□□□□ 0.36
CDC42SE1-203ENST00000470278 ACAD9Q9H845 621 aa17.3■□□□□ 0.36
CDC42SE1-203ENST00000470278 RNF146Q9NTX7 359 aa17.3■□□□□ 0.36
CDC42SE1-203ENST00000470278 IVNS1ABPQ9Y6Y0 642 aa17.3■□□□□ 0.36
CDC42SE1-203ENST00000470278 BAZ2BQ9UIF8 2168 aaKnown RBP17.3■□□□□ 0.36
CDC42SE1-203ENST00000470278 ABCB11O95342 1321 aa17.29■□□□□ 0.36
CDC42SE1-203ENST00000470278 FRMPD3Q5JV73 1810 aa17.29■□□□□ 0.36
CDC42SE1-203ENST00000470278 DNAH12Q6ZR08 3092 aa17.29■□□□□ 0.36
CDC42SE1-203ENST00000470278 PPP1R11O60927 126 aaPredicted RBP17.29■□□□□ 0.36
CDC42SE1-203ENST00000470278 FCER1AP12319 257 aa17.29■□□□□ 0.36
CDC42SE1-203ENST00000470278 ELNP15502 786 aa17.29■□□□□ 0.36
CDC42SE1-203ENST00000470278 IFNAR1P17181 557 aa17.29■□□□□ 0.36
CDC42SE1-203ENST00000470278 ADD1P35611 737 aaKnown RBP17.29■□□□□ 0.36
CDC42SE1-203ENST00000470278 IRF5Q13568 498 aa17.29■□□□□ 0.36
CDC42SE1-203ENST00000470278 HOMER1Q86YM7 354 aa17.29■□□□□ 0.36
CDC42SE1-203ENST00000470278 CMTR1Q8N1G2 835 aaKnown RBP17.29■□□□□ 0.36
CDC42SE1-203ENST00000470278 RAET1EQ8TD07 263 aa17.29■□□□□ 0.36
CDC42SE1-203ENST00000470278 USP6NLQ92738 828 aa17.29■□□□□ 0.36
CDC42SE1-203ENST00000470278 TRERF1Q96PN7 1200 aa17.29■□□□□ 0.36
CDC42SE1-203ENST00000470278 SLKQ9H2G2 1235 aaPredicted RBP17.29■□□□□ 0.36
CDC42SE1-203ENST00000470278 CWC22Q9HCG8 908 aaKnown RBP17.29■□□□□ 0.36
CDC42SE1-203ENST00000470278 VAT1LQ9HCJ6 419 aa17.29■□□□□ 0.36
CDC42SE1-203ENST00000470278 RBM27Q9P2N5 1060 aaKnown RBP17.29■□□□□ 0.36
CDC42SE1-203ENST00000470278 SEC63Q9UGP8 760 aaKnown RBP17.29■□□□□ 0.36
CDC42SE1-203ENST00000470278 GJD2Q9UKL4 321 aa17.29■□□□□ 0.36
CDC42SE1-203ENST00000470278 LIMCH1Q9UPQ0 1083 aa17.29■□□□□ 0.36
CDC42SE1-203ENST00000470278 SMCHD1A6NHR9 2005 aa17.29■□□□□ 0.36
CDC42SE1-203ENST00000470278 PFASO15067 1338 aa17.28■□□□□ 0.36
CDC42SE1-203ENST00000470278 ALAS1P13196 640 aa17.28■□□□□ 0.36
CDC42SE1-203ENST00000470278 MCM2P49736 904 aa17.28■□□□□ 0.36
CDC42SE1-203ENST00000470278 FLT3LGP49771 235 aa17.28■□□□□ 0.36
CDC42SE1-203ENST00000470278 CCT2P78371 535 aaKnown RBP17.28■□□□□ 0.36
CDC42SE1-203ENST00000470278 SCRN1Q12765 414 aa17.28■□□□□ 0.36
CDC42SE1-203ENST00000470278 KCTD2Q14681 263 aa17.28■□□□□ 0.36
CDC42SE1-203ENST00000470278 ME3Q16798 604 aa17.28■□□□□ 0.36
CDC42SE1-203ENST00000470278 WDR78Q5VTH9 848 aa17.28■□□□□ 0.36
CDC42SE1-203ENST00000470278 GTF3C6Q969F1 213 aa17.28■□□□□ 0.36
CDC42SE1-203ENST00000470278 NUDT12Q9BQG2 462 aa17.28■□□□□ 0.36
CDC42SE1-203ENST00000470278 LARP6Q9BRS8 491 aaKnown RBP17.28■□□□□ 0.36
CDC42SE1-203ENST00000470278 RNF26Q9BY78 433 aaPredicted RBP17.28■□□□□ 0.36
CDC42SE1-203ENST00000470278 NCOA5Q9HCD5 579 aaKnown RBP17.28■□□□□ 0.36
CDC42SE1-203ENST00000470278 PLXNA1Q9UIW2 1896 aa17.27■□□□□ 0.36
CDC42SE1-203ENST00000470278 hCG_1984214I3L0E3 225 aa17.27■□□□□ 0.36
CDC42SE1-203ENST00000470278 LARGE1O95461 756 aa17.27■□□□□ 0.36
CDC42SE1-203ENST00000470278 HOXC6P09630 235 aa17.27■□□□□ 0.36
CDC42SE1-203ENST00000470278 XRCC5P13010 732 aaKnown RBP17.27■□□□□ 0.36
CDC42SE1-203ENST00000470278 ADORA2AP29274 412 aa17.27■□□□□ 0.36
CDC42SE1-203ENST00000470278 RGS2P41220 211 aa17.27■□□□□ 0.36
CDC42SE1-203ENST00000470278 GHRHRQ02643 423 aa17.27■□□□□ 0.36
CDC42SE1-203ENST00000470278 MAP2K5Q13163 448 aa17.27■□□□□ 0.36
CDC42SE1-203ENST00000470278 USH1GQ495M9 461 aa17.27■□□□□ 0.36
CDC42SE1-203ENST00000470278 CPLX2Q6PUV4 134 aaKnown RBP17.27■□□□□ 0.36
CDC42SE1-203ENST00000470278 ZNF713Q8N859 430 aaPredicted RBP17.27■□□□□ 0.36
CDC42SE1-203ENST00000470278 RGS22Q8NE09 1264 aa17.27■□□□□ 0.36
CDC42SE1-203ENST00000470278 CLEC4DQ8WXI8 215 aa17.27■□□□□ 0.36
CDC42SE1-203ENST00000470278 MMP19Q99542 508 aa17.27■□□□□ 0.36
CDC42SE1-203ENST00000470278 APBA2Q99767 749 aa17.27■□□□□ 0.36
CDC42SE1-203ENST00000470278 HOMER2Q9NSB8 354 aa17.27■□□□□ 0.36
CDC42SE1-203ENST00000470278 LCTP09848 1927 aa17.27■□□□□ 0.35
CDC42SE1-203ENST00000470278 ZNFX1Q9P2E3 1918 aaKnown RBP17.26■□□□□ 0.35
CDC42SE1-203ENST00000470278 DNAJC25-GNG10A0A024R161 153 aa17.26■□□□□ 0.35
CDC42SE1-203ENST00000470278 CPLX1O14810 134 aa17.26■□□□□ 0.35
CDC42SE1-203ENST00000470278 CDKL5O76039 1030 aa17.26■□□□□ 0.35
CDC42SE1-203ENST00000470278 TAL1P17542 331 aaPredicted RBP17.26■□□□□ 0.35
CDC42SE1-203ENST00000470278 STK3Q13188 491 aa17.26■□□□□ 0.35
CDC42SE1-203ENST00000470278 MUM1L1Q5H9M0 696 aa17.26■□□□□ 0.35
CDC42SE1-203ENST00000470278 CHRDL2Q6WN34 429 aa17.26■□□□□ 0.35
CDC42SE1-203ENST00000470278 CCDC82Q8N4S0 544 aa17.26■□□□□ 0.35
CDC42SE1-203ENST00000470278 SLAIN1Q8ND83 568 aa17.26■□□□□ 0.35
CDC42SE1-203ENST00000470278 U2AF1L4Q8WU68 220 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms