RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 APPBP2Q92624 585 aa14.05□□□□□ -0.16
CNOT4-208ENST00000465721 NOC4LQ9BVI4 516 aaKnown RBP14.05□□□□□ -0.16
CNOT4-208ENST00000465721 WNT8AQ9H1J5 351 aa14.05□□□□□ -0.16
CNOT4-208ENST00000465721 HIPK3Q9H422 1215 aa14.05□□□□□ -0.16
CNOT4-208ENST00000465721 ACAD9Q9H845 621 aa14.05□□□□□ -0.16
CNOT4-208ENST00000465721 A1CFQ9NQ94 594 aaKnown RBP14.05□□□□□ -0.16
CNOT4-208ENST00000465721 MSRAQ9UJ68 235 aa14.05□□□□□ -0.16
CNOT4-208ENST00000465721 ZNF536O15090 1300 aa14.05□□□□□ -0.16
CNOT4-208ENST00000465721 SOWAHBA6NEL2 793 aa14.04□□□□□ -0.16
CNOT4-208ENST00000465721 GPAA1O43292 621 aa14.04□□□□□ -0.16
CNOT4-208ENST00000465721 SMARCA5O60264 1052 aaPredicted RBP14.04□□□□□ -0.16
CNOT4-208ENST00000465721 CABYRO75952 493 aa14.04□□□□□ -0.16
CNOT4-208ENST00000465721 TTLL1O95922 423 aa14.04□□□□□ -0.16
CNOT4-208ENST00000465721 TNFAIP2Q03169 654 aa14.04□□□□□ -0.16
CNOT4-208ENST00000465721 VWCEQ96DN2 955 aa14.04□□□□□ -0.16
CNOT4-208ENST00000465721 LRRCC1Q9C099 1032 aa14.04□□□□□ -0.16
CNOT4-208ENST00000465721 MTIF3Q9H2K0 278 aaKnown RBP14.04□□□□□ -0.16
CNOT4-208ENST00000465721 RNF146Q9NTX7 359 aa14.04□□□□□ -0.16
CNOT4-208ENST00000465721 DDX49Q9Y6V7 483 aaKnown RBP14.04□□□□□ -0.16
CNOT4-208ENST00000465721 M0R2C6 588 aa14.03□□□□□ -0.16
CNOT4-208ENST00000465721 B4GALT4O60513 344 aa14.03□□□□□ -0.16
CNOT4-208ENST00000465721 FGBP02675 491 aa14.03□□□□□ -0.16
CNOT4-208ENST00000465721 FDX1P10109 184 aa14.03□□□□□ -0.16
CNOT4-208ENST00000465721 BMP3P12645 472 aa14.03□□□□□ -0.16
CNOT4-208ENST00000465721 TDO2P48775 406 aa14.03□□□□□ -0.16
CNOT4-208ENST00000465721 STAT2P52630 851 aa14.03□□□□□ -0.16
CNOT4-208ENST00000465721 MRPS5P82675 430 aaKnown RBP14.03□□□□□ -0.16
CNOT4-208ENST00000465721 ITGA7Q13683 1181 aa14.03□□□□□ -0.16
CNOT4-208ENST00000465721 CCDC85BQ15834 202 aaPredicted RBP14.03□□□□□ -0.16
CNOT4-208ENST00000465721 FSCN1Q16658 493 aaKnown RBP14.03□□□□□ -0.16
CNOT4-208ENST00000465721 SLFN13Q68D06 897 aa14.03□□□□□ -0.16
CNOT4-208ENST00000465721 OTOP2Q7RTS6 562 aa14.03□□□□□ -0.16
CNOT4-208ENST00000465721 AGBL1Q96MI9 1066 aa14.03□□□□□ -0.16
CNOT4-208ENST00000465721 UHRF1Q96T88 793 aaPredicted RBP14.03□□□□□ -0.16
CNOT4-208ENST00000465721 ECHDC1Q9NTX5 307 aa14.03□□□□□ -0.16
CNOT4-208ENST00000465721 MYH6P13533 1939 aa14.03□□□□□ -0.16
CNOT4-208ENST00000465721 KIAA1217Q5T5P2 1943 aa14.03□□□□□ -0.16
CNOT4-208ENST00000465721 ASB14A6NK59 587 aa14.02□□□□□ -0.17
CNOT4-208ENST00000465721 SPDYE4A6NLX3 237 aa14.02□□□□□ -0.17
CNOT4-208ENST00000465721 TMEM232C9JQI7 657 aa14.02□□□□□ -0.17
CNOT4-208ENST00000465721 RNF113AO15541 343 aaKnown RBP14.02□□□□□ -0.17
CNOT4-208ENST00000465721 SMPD1P17405 629 aa14.02□□□□□ -0.17
CNOT4-208ENST00000465721 IGFBP4P22692 258 aa14.02□□□□□ -0.17
CNOT4-208ENST00000465721 RABGGTBP53611 331 aa14.02□□□□□ -0.17
CNOT4-208ENST00000465721 CCL23P55773 120 aa14.02□□□□□ -0.17
CNOT4-208ENST00000465721 TMEM63BQ5T3F8 832 aa14.02□□□□□ -0.17
CNOT4-208ENST00000465721 FBXO16Q8IX29 292 aaPredicted RBP14.02□□□□□ -0.17
CNOT4-208ENST00000465721 ZNF444Q8N0Y2 327 aaPredicted RBP14.02□□□□□ -0.17
CNOT4-208ENST00000465721 NEDD1Q8NHV4 660 aa14.02□□□□□ -0.17
CNOT4-208ENST00000465721 GMCL1Q96IK5 515 aa14.02□□□□□ -0.17
CNOT4-208ENST00000465721 TRPV6Q9H1D0 765 aa14.02□□□□□ -0.17
CNOT4-208ENST00000465721 SLC28A3Q9HAS3 691 aa14.02□□□□□ -0.17
CNOT4-208ENST00000465721 ZNF287Q9HBT7 754 aa14.02□□□□□ -0.17
CNOT4-208ENST00000465721 PIEZO1Q92508 2521 aa14.01□□□□□ -0.17
CNOT4-208ENST00000465721 GNAT2P19087 354 aa14.01□□□□□ -0.17
CNOT4-208ENST00000465721 PSMC6P62333 389 aa14.01□□□□□ -0.17
CNOT4-208ENST00000465721 TKFCQ3LXA3 575 aa14.01□□□□□ -0.17
CNOT4-208ENST00000465721 TSHZ3Q63HK5 1081 aa14.01□□□□□ -0.17
CNOT4-208ENST00000465721 TAPT1Q6NXT6 567 aa14.01□□□□□ -0.17
CNOT4-208ENST00000465721 NOL8Q76FK4 1167 aaKnown RBP14.01□□□□□ -0.17
CNOT4-208ENST00000465721 RASGRP2Q7LDG7 609 aa14.01□□□□□ -0.17
CNOT4-208ENST00000465721 FAM160B2Q86V87 743 aa14.01□□□□□ -0.17
CNOT4-208ENST00000465721 IFNL3Q8IZI9 196 aa14.01□□□□□ -0.17
CNOT4-208ENST00000465721 PDGFCQ9NRA1 345 aa14.01□□□□□ -0.17
CNOT4-208ENST00000465721 ZFYP08048 801 aaPredicted RBP14□□□□□ -0.17
CNOT4-208ENST00000465721 TSPY3P0CV98 308 aa14□□□□□ -0.17
CNOT4-208ENST00000465721 TSPY8P0CW00 308 aa14□□□□□ -0.17
CNOT4-208ENST00000465721 MYOGP15173 224 aa14□□□□□ -0.17
CNOT4-208ENST00000465721 MUM1L1Q5H9M0 696 aa14□□□□□ -0.17
CNOT4-208ENST00000465721 PPP2R2DQ66LE6 453 aa14□□□□□ -0.17
CNOT4-208ENST00000465721 MORC4Q8TE76 937 aa14□□□□□ -0.17
CNOT4-208ENST00000465721 STAG1Q8WVM7 1258 aa14□□□□□ -0.17
CNOT4-208ENST00000465721 SCLYQ96I15 445 aa14□□□□□ -0.17
CNOT4-208ENST00000465721 TRERF1Q96PN7 1200 aa14□□□□□ -0.17
CNOT4-208ENST00000465721 SEZ6LQ9BYH1 1024 aa14□□□□□ -0.17
CNOT4-208ENST00000465721 AP5M1Q9H0R1 490 aa14□□□□□ -0.17
CNOT4-208ENST00000465721 CYP39A1Q9NYL5 469 aa14□□□□□ -0.17
CNOT4-208ENST00000465721 PCDHA11Q9Y5I1 949 aa14□□□□□ -0.17
CNOT4-208ENST00000465721 SLC4A7Q9Y6M7 1214 aa14□□□□□ -0.17
CNOT4-208ENST00000465721 SIP14410 1827 aa13.99□□□□□ -0.17
CNOT4-208ENST00000465721 MUC6Q6W4X9 2439 aa13.99□□□□□ -0.17
CNOT4-208ENST00000465721 DYNC1LI2O43237 492 aaPredicted RBP13.99□□□□□ -0.17
CNOT4-208ENST00000465721 PLA2G6O60733 806 aa13.99□□□□□ -0.17
CNOT4-208ENST00000465721 ALAS1P13196 640 aa13.99□□□□□ -0.17
CNOT4-208ENST00000465721 SLC1A4P43007 532 aa13.99□□□□□ -0.17
CNOT4-208ENST00000465721 EEPD1Q7L9B9 569 aa13.99□□□□□ -0.17
CNOT4-208ENST00000465721 CHURC1Q8WUH1 139 aa13.99□□□□□ -0.17
CNOT4-208ENST00000465721 NECAB3Q96P71 396 aaPredicted RBP13.99□□□□□ -0.17
CNOT4-208ENST00000465721 ALDH8A1Q9H2A2 487 aaPredicted RBP13.99□□□□□ -0.17
CNOT4-208ENST00000465721 VTA1Q9NP79 307 aa13.99□□□□□ -0.17
CNOT4-208ENST00000465721 ISY1Q9ULR0 285 aaKnown RBP13.99□□□□□ -0.17
CNOT4-208ENST00000465721 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.99□□□□□ -0.17
CNOT4-208ENST00000465721 Q9Y3F1 56 aa13.99□□□□□ -0.17
CNOT4-208ENST00000465721 MYH7BA7E2Y1 1941 aa13.98□□□□□ -0.17
CNOT4-208ENST00000465721 PATL2C9JE40 543 aaKnown RBP13.98□□□□□ -0.17
CNOT4-208ENST00000465721 ZEB2O60315 1214 aa13.98□□□□□ -0.17
CNOT4-208ENST00000465721 APPP05067 770 aa13.98□□□□□ -0.17
CNOT4-208ENST00000465721 BMP1P13497 986 aa13.98□□□□□ -0.17
CNOT4-208ENST00000465721 ATP2A2P16615 1042 aaKnown RBP13.98□□□□□ -0.17
CNOT4-208ENST00000465721 MCCP23508 829 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms