RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 TMPRSS15P98073 1019 aa6.78□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 GNPTABQ3T906 1256 aa6.78□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 FAM83BQ5T0W9 1011 aa6.78□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 YOD1Q5VVQ6 348 aaPredicted RBP6.78□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 JAKMIP3Q5VZ66 844 aa6.78□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 SAMD14Q8IZD0 417 aaPredicted RBP6.78□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 SPICE1Q8N0Z3 855 aa6.78□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 CNTD1Q8N815 330 aa6.78□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 TBC1D20Q96BZ9 403 aa6.78□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 TTC1Q99614 292 aa6.78□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 TSEN34Q9BSV6 310 aaKnown RBP6.78□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 ARHGEF4Q9NR80 690 aa6.78□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 OBP2AQ9NY56 170 aa6.78□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 GMIPQ9P107 970 aa6.78□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 USP25Q9UHP3 1055 aa6.78□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 ARHGEF5Q12774 1597 aa6.78□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 SMG6Q86US8 1419 aaKnown RBP6.77□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 SHROOM2Q13796 1616 aa6.77□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 A0A1W2PQU0 124 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 DYNC1I1O14576 645 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PAX7P23759 505 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PSMA3P25788 255 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 HOXC13P31276 330 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SNX16P57768 344 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 KCNC4Q03721 635 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PTPN11Q06124 597 aaPredicted RBP6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 TMED1Q13445 227 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 TCIRG1Q13488 830 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PUM3Q15397 648 aaKnown RBP6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 DDB1Q16531 1140 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SYDE2Q5VT97 1194 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 TSHZ3Q63HK5 1081 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 IL31Q6EBC2 164 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PKN3Q6P5Z2 889 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 DAAM2Q86T65 1068 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 C11orf74Q86VG3 221 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 FLCNQ8NFG4 579 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PGBD4Q96DM1 585 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 NSUN5Q96P11 429 aaKnown RBP6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 RHOBTB2Q9BYZ6 727 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 TRIM8Q9BZR9 551 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PRDM11Q9NQV5 511 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 C9orf78Q9NZ63 289 aaPredicted RBP6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 FAM86C2PA6NEL3 165 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 GABRDO14764 452 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 TPPPO94811 219 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 ABLIM3O94929 683 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 TRIM27P14373 513 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 TIMP2P16035 220 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 RPL17P18621 184 aaKnown RBP6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 MRE11P49959 708 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 HNRNPMP52272 730 aaKnown RBP eCLIP6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PDE1CQ14123 709 aaPredicted RBP6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PCBP1Q15365 356 aaKnown RBP eCLIP6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SAMD5Q5TGI4 173 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 TTLL5Q6EMB2 1281 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PPP4R3AQ6IN85 833 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 CXorf57Q6NSI4 855 aaKnown RBP6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 RASSF3Q86WH2 238 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 ZNF354CQ86Y25 554 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 MEIOBQ8N635 442 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 ZFPM2Q8WW38 1151 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 KLHL6Q8WZ60 621 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SERINC2Q96SA4 455 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 LUC7LQ9NQ29 371 aaKnown RBP6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SUN2Q9UH99 717 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PRR36Q9H6K5 1346 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 NUP155O75694 1391 aa6.77□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PREX2Q70Z35 1606 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 FAM83GA6ND36 823 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SMTNL1A8MU46 457 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SPINT1O43278 529 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 HTATSF1O43719 755 aaKnown RBP6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 CCDC159P0C7I6 412 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 NME1P15531 152 aaKnown RBP6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 NFKB1P19838 968 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 CTSOP43234 321 aaPredicted RBP6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SFSWAPQ12872 951 aaKnown RBP6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 NBPF8Q3BBV2 869 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 WDR45BQ5MNZ6 344 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 ANKRD45Q5TZF3 282 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SCARA3Q6AZY7 606 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 OVOS1Q6IE37 1185 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 CFAP161Q6P656 301 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 CPLX2Q6PUV4 134 aaKnown RBP6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 LIAT1Q6ZQX7 453 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 NLRC3Q7RTR2 1065 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 CLASRPQ8N2M8 674 aaKnown RBP6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 STK35Q8TDR2 534 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 NELL1Q92832 810 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 USP7Q93009 1102 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 ATG4CQ96DT6 458 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SCLT1Q96NL6 688 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 AARSD1Q9BTE6 412 aaKnown RBP6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 TRIM6Q9C030 488 aaPredicted RBP6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 CRISPLD1Q9H336 500 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 ATG3Q9NT62 314 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 COMMD8Q9NX08 183 aa6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 UTP6Q9NYH9 597 aaKnown RBP6.76□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 LRP2BPQ9P2M1 347 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms