RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 NKX2-4Q9H2Z4 354 aa2.48□□□□□ -2.01
SNORA48.1-201ENST00000390879 VTA1Q9NP79 307 aa2.48□□□□□ -2.01
SNORA48.1-201ENST00000390879 LUC7LQ9NQ29 371 aaKnown RBP2.48□□□□□ -2.01
SNORA48.1-201ENST00000390879 CYP26B1Q9NR63 512 aa2.48□□□□□ -2.01
SNORA48.1-201ENST00000390879 THG1LQ9NWX6 298 aaKnown RBP2.48□□□□□ -2.01
SNORA48.1-201ENST00000390879 APOBEC2Q9Y235 224 aaKnown RBP2.48□□□□□ -2.01
SNORA48.1-201ENST00000390879 COQ6Q9Y2Z9 468 aa2.48□□□□□ -2.01
SNORA48.1-201ENST00000390879 LUC7L2Q9Y383 392 aaKnown RBP2.48□□□□□ -2.01
SNORA48.1-201ENST00000390879 DAGLAQ9Y4D2 1042 aa2.48□□□□□ -2.01
SNORA48.1-201ENST00000390879 COMMD10Q9Y6G5 202 aa2.48□□□□□ -2.01
SNORA48.1-201ENST00000390879 SYNGAP1Q96PV0 1343 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 A0A087WZG4 1122 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 E2F8A0AVK6 867 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 KRBA1A5PL33 1030 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 GOLGA6CA6NDK9 693 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 GOLGA6BA6NDN3 693 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 FAM229AH3BQW9 127 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 CBX4O00257 560 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 CREB3O43889 395 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 ZEB2O60315 1214 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 GAS7O60861 476 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 FBXO21O94952 628 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 SNUPNO95149 360 aaKnown RBP2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 FKBP9O95302 570 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 PRAMEF1O95521 474 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 LDHAP00338 332 aaKnown RBP2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 CPP00450 1065 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 GOLGA6DP0CG33 693 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 KCNA6P17658 529 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 ITIH2P19823 946 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 ETV3P41162 512 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 DNM2P50570 870 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 USP11P51784 963 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 RAC1P63000 192 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 SRSF11Q05519 484 aaKnown RBP2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 CYP4F3Q08477 520 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 COL9A3Q14050 684 aaPredicted RBP2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 GFOD2Q3B7J2 385 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 ATP13A4Q4VNC1 1196 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 SLC35F1Q5T1Q4 408 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 FAM102BQ5T8I3 360 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 STYK1Q6J9G0 422 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 CRTC3Q6UUV7 619 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 TSHZ1Q6ZSZ6 1077 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 FKBP9P1Q75LS8 142 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 FBXO11Q86XK2 927 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 TCEAL8Q8IYN2 117 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 FMR1NBQ8N0W7 255 aaPredicted RBP2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 CISD2Q8N5K1 135 aaKnown RBP2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 MAGEB6Q8N7X4 407 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 C2CD4AQ8NCU7 369 aaPredicted RBP2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 SMG8Q8ND04 991 aaKnown RBP2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 DCAF4Q8WV16 495 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 CHTF18Q8WVB6 975 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 RNF141Q8WVD5 230 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 VWCEQ96DN2 955 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 C1orf159Q96HA4 380 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 LRGUKQ96M69 825 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 CCDC140Q96MF4 163 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 MCMBPQ9BTE3 642 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 ASPNQ9BXN1 380 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 RRAGCQ9HB90 399 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 CABP5Q9NP86 173 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 GPRC5CQ9NQ84 441 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 PRDM6Q9NQX0 595 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 SPTLC3Q9NUV7 552 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 GOLGA6AQ9NYA3 693 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 PCOLCE2Q9UKZ9 415 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 TPX2Q9ULW0 747 aaKnown RBP2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 DIS3Q9Y2L1 958 aaKnown RBP2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 ZKSCAN5Q9Y2L8 839 aa2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 SF3B6Q9Y3B4 125 aaKnown RBP2.47□□□□□ -2.01
SNORA48.1-201ENST00000390879 COL17A1Q9UMD9 1497 aaPredicted RBP2.46□□□□□ -2.02
SNORA48.1-201ENST00000390879 A0A0A0MRY4 1105 aa2.46□□□□□ -2.02
SNORA48.1-201ENST00000390879 MEGF11A6BM72 1044 aa2.46□□□□□ -2.02
SNORA48.1-201ENST00000390879 H3BM21 787 aa2.46□□□□□ -2.02
SNORA48.1-201ENST00000390879 MEFVO15553 781 aaPredicted RBP2.46□□□□□ -2.02
SNORA48.1-201ENST00000390879 DYNC1LI2O43237 492 aaPredicted RBP2.46□□□□□ -2.02
SNORA48.1-201ENST00000390879 OIP5O43482 229 aa2.46□□□□□ -2.02
SNORA48.1-201ENST00000390879 GAS2O43903 313 aaKnown RBP2.46□□□□□ -2.02
SNORA48.1-201ENST00000390879 MSCO60682 206 aa2.46□□□□□ -2.02
SNORA48.1-201ENST00000390879 KRT37O76014 449 aa2.46□□□□□ -2.02
SNORA48.1-201ENST00000390879 ABLIM3O94929 683 aa2.46□□□□□ -2.02
SNORA48.1-201ENST00000390879 ALX3O95076 343 aa2.46□□□□□ -2.02
SNORA48.1-201ENST00000390879 TIAF1O95411 115 aa2.46□□□□□ -2.02
SNORA48.1-201ENST00000390879 CBX7O95931 251 aa2.46□□□□□ -2.02
SNORA48.1-201ENST00000390879 F2P00734 622 aa2.46□□□□□ -2.02
SNORA48.1-201ENST00000390879 THBDP07204 575 aa2.46□□□□□ -2.02
SNORA48.1-201ENST00000390879 NFICP08651 508 aa2.46□□□□□ -2.02
SNORA48.1-201ENST00000390879 PF4V1P10720 104 aa2.46□□□□□ -2.02
SNORA48.1-201ENST00000390879 LCP1P13796 627 aa2.46□□□□□ -2.02
SNORA48.1-201ENST00000390879 IFNGR1P15260 489 aa2.46□□□□□ -2.02
SNORA48.1-201ENST00000390879 LORP23490 312 aaPredicted RBP2.46□□□□□ -2.02
SNORA48.1-201ENST00000390879 GRIK1P39086 918 aa2.46□□□□□ -2.02
SNORA48.1-201ENST00000390879 KRT76Q01546 638 aa2.46□□□□□ -2.02
SNORA48.1-201ENST00000390879 DSG1Q02413 1049 aa2.46□□□□□ -2.02
SNORA48.1-201ENST00000390879 NMIQ13287 307 aaPredicted RBP2.46□□□□□ -2.02
SNORA48.1-201ENST00000390879 CDK5R2Q13319 367 aa2.46□□□□□ -2.02
SNORA48.1-201ENST00000390879 PCBP2Q15366 365 aaKnown RBP eCLIP2.46□□□□□ -2.02
SNORA48.1-201ENST00000390879 C10orf62Q5T681 223 aaPredicted RBP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms