RNA–Protein interactions for RNA: ENST00000390444.1

TRAV16-201, Transcript of T cell receptor alpha variable 16, humanhuman

APPRIS P1 BASIC

Gene TRAV16, Length 329 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16-201ENST00000390444 ATL3Q6DD88 541 aa5.97□□□□□ -1.45
TRAV16-201ENST00000390444 MCTP1Q6DN14 999 aa5.97□□□□□ -1.45
TRAV16-201ENST00000390444 ARHGAP27Q6ZUM4 889 aa5.97□□□□□ -1.45
TRAV16-201ENST00000390444 TMEM179Q6ZVK1 233 aa5.97□□□□□ -1.45
TRAV16-201ENST00000390444 BRAPQ7Z569 592 aa5.97□□□□□ -1.45
TRAV16-201ENST00000390444 CCDC144CPQ8IYA2 1237 aa5.97□□□□□ -1.45
TRAV16-201ENST00000390444 PLPP7Q8NBV4 271 aa5.97□□□□□ -1.45
TRAV16-201ENST00000390444 BAP1Q92560 729 aa5.97□□□□□ -1.45
TRAV16-201ENST00000390444 PHKBQ93100 1093 aa5.97□□□□□ -1.45
TRAV16-201ENST00000390444 CSRNP1Q96S65 589 aa5.97□□□□□ -1.45
TRAV16-201ENST00000390444 LZTS2Q9BRK4 669 aa5.97□□□□□ -1.45
TRAV16-201ENST00000390444 ALG1Q9BT22 464 aa5.97□□□□□ -1.45
TRAV16-201ENST00000390444 SPZ1Q9BXG8 430 aa5.97□□□□□ -1.45
TRAV16-201ENST00000390444 SLC26A6Q9BXS9 759 aa5.97□□□□□ -1.45
TRAV16-201ENST00000390444 LMBRD1Q9NUN5 540 aa5.97□□□□□ -1.45
TRAV16-201ENST00000390444 STX8Q9UNK0 236 aa5.97□□□□□ -1.45
TRAV16-201ENST00000390444 MYH7BA7E2Y1 1941 aa5.97□□□□□ -1.45
TRAV16-201ENST00000390444 COL11A1P12107 1806 aaPredicted RBP5.97□□□□□ -1.45
TRAV16-201ENST00000390444 RLFQ13129 1914 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 SHTN1A0MZ66 631 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 CLRN2A0PK11 232 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 TCP10L2B9ZVM9 353 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 DTNBO60941 627 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 PLEKHA8P1O95397 391 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 MBD3O95983 291 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 PARP1P09874 1014 aaKnown RBP5.96□□□□□ -1.46
TRAV16-201ENST00000390444 PDHBP11177 359 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 YBX3P16989 372 aaKnown RBP eCLIP5.96□□□□□ -1.46
TRAV16-201ENST00000390444 GGCXP38435 758 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 KIF23Q02241 960 aaPredicted RBP5.96□□□□□ -1.46
TRAV16-201ENST00000390444 NCOA4Q13772 614 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 TRIM29Q14134 588 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 ELOAQ14241 798 aaKnown RBP5.96□□□□□ -1.46
TRAV16-201ENST00000390444 AGERQ15109 404 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 PKN1Q16512 942 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 KLHL40Q2TBA0 621 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 KIF4BQ2VIQ3 1234 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 NBPF20Q3BBV1 942 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 NBPF9Q3BBW0 867 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 CERKLQ49MI3 558 aaPredicted RBP5.96□□□□□ -1.46
TRAV16-201ENST00000390444 ASPRV1Q53RT3 343 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 FOXD4L5Q5VV16 416 aaPredicted RBP5.96□□□□□ -1.46
TRAV16-201ENST00000390444 KRT40Q6A162 431 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 APOBEC3FQ8IUX4 373 aaKnown RBP5.96□□□□□ -1.46
TRAV16-201ENST00000390444 ZSCAN29Q8IWY8 852 aaPredicted RBP5.96□□□□□ -1.46
TRAV16-201ENST00000390444 TRMT44Q8IYL2 757 aaKnown RBP5.96□□□□□ -1.46
TRAV16-201ENST00000390444 SRBD1Q8N5C6 995 aaKnown RBP5.96□□□□□ -1.46
TRAV16-201ENST00000390444 FOXD4L4Q8WXT5 416 aaPredicted RBP5.96□□□□□ -1.46
TRAV16-201ENST00000390444 FOXJ1Q92949 421 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 MKL1Q969V6 931 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 AIFM3Q96NN9 605 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 SCAND2PQ9GZW5 306 aaPredicted RBP5.96□□□□□ -1.46
TRAV16-201ENST00000390444 VRTNQ9H8Y1 702 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 KANSL2Q9H9L4 492 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 VEZTQ9HBM0 779 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 SH3GLB2Q9NR46 395 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 GPRC5DQ9NZD1 345 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 NYAP2Q9P242 653 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 MAD2L2Q9UI95 211 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 CNOT7Q9UIV1 285 aaKnown RBP5.96□□□□□ -1.46
TRAV16-201ENST00000390444 CNPY2Q9Y2B0 182 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 PITPNM2Q9BZ72 1349 aa5.96□□□□□ -1.46
TRAV16-201ENST00000390444 A0A0G2JMZ2 1700 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 FAM196BA6NMK8 535 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 USP17L15C9J2P7 530 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 USP17L10C9JJH3 530 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 USP17L13C9JLJ4 530 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 USP17L11C9JVI0 530 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 USP17L18D6R9N7 530 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 USP17L22D6RA61 530 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 USP17L17D6RBQ6 530 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 USP17L19D6RCP7 530 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 USP17L20D6RJB6 530 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 H7C1D1 291 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 hCG_1984214I3L0E3 225 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 LZTS3O60299 673 aaPredicted RBP5.95□□□□□ -1.46
TRAV16-201ENST00000390444 EGFRP00533 1210 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 MMP1P03956 469 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 SCG2P13521 617 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 XBP1P17861 261 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 U2AF2P26368 475 aaKnown RBP eCLIP5.95□□□□□ -1.46
TRAV16-201ENST00000390444 GUCY1A2P33402 732 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 AKAP17AQ02040 695 aaKnown RBP5.95□□□□□ -1.46
TRAV16-201ENST00000390444 ICA1Q05084 483 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 DNM1Q05193 864 aaKnown RBP5.95□□□□□ -1.46
TRAV16-201ENST00000390444 USP17L24Q0WX57 530 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 TRIM32Q13049 653 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 PFKFB3Q16875 520 aaPredicted RBP5.95□□□□□ -1.46
TRAV16-201ENST00000390444 ABCB5Q2M3G0 1257 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 MAP7D1Q3KQU3 841 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 C4orf48Q5BLP8 95 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 FERMT3Q86UX7 667 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 DEPDC4Q8N2C3 294 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 PHTF2Q8N3S3 785 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 ZNF713Q8N859 430 aaPredicted RBP5.95□□□□□ -1.46
TRAV16-201ENST00000390444 ANKLE1Q8NAG6 615 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 GMCL1P1Q8NEA9 526 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 DCAF4Q8WV16 495 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 TEPSINQ96N21 525 aa5.95□□□□□ -1.46
TRAV16-201ENST00000390444 ZNF396Q96N95 335 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms