RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 IFNGR1P15260 489 aa3.74□□□□□ -1.81
RNU6-541P-201ENST00000384709 AMPD2Q01433 879 aa3.74□□□□□ -1.81
RNU6-541P-201ENST00000384709 CBX2Q14781 532 aaPredicted RBP3.74□□□□□ -1.81
RNU6-541P-201ENST00000384709 DDR2Q16832 855 aa3.74□□□□□ -1.81
RNU6-541P-201ENST00000384709 FBLN7Q53RD9 439 aa3.74□□□□□ -1.81
RNU6-541P-201ENST00000384709 EEF1DP3Q658K8 133 aa3.74□□□□□ -1.81
RNU6-541P-201ENST00000384709 POMZP3Q6PJE2 187 aa3.74□□□□□ -1.81
RNU6-541P-201ENST00000384709 CEP128Q6ZU80 1094 aa3.74□□□□□ -1.81
RNU6-541P-201ENST00000384709 CELF2-AS1Q8N7Q2 184 aa3.74□□□□□ -1.81
RNU6-541P-201ENST00000384709 FBXO15Q8NCQ5 510 aaPredicted RBP3.74□□□□□ -1.81
RNU6-541P-201ENST00000384709 ST13P5Q8NFI4 369 aaPredicted RBP3.74□□□□□ -1.81
RNU6-541P-201ENST00000384709 HNRNPLLQ8WVV9 542 aaKnown RBP3.74□□□□□ -1.81
RNU6-541P-201ENST00000384709 SGSM3Q96HU1 749 aa3.74□□□□□ -1.81
RNU6-541P-201ENST00000384709 ZDHHC15Q96MV8 337 aa3.74□□□□□ -1.81
RNU6-541P-201ENST00000384709 MMP19Q99542 508 aa3.74□□□□□ -1.81
RNU6-541P-201ENST00000384709 CDADC1Q9BWV3 514 aa3.74□□□□□ -1.81
RNU6-541P-201ENST00000384709 NKX2-4Q9H2Z4 354 aa3.74□□□□□ -1.81
RNU6-541P-201ENST00000384709 TNFRSF12AQ9NP84 129 aa3.74□□□□□ -1.81
RNU6-541P-201ENST00000384709 AKT3Q9Y243 479 aa3.74□□□□□ -1.81
RNU6-541P-201ENST00000384709 TRBV23OR9-2A0A075B6M9 112 aa3.73□□□□□ -1.81
RNU6-541P-201ENST00000384709 C2orf71A6NGG8 1288 aa3.73□□□□□ -1.81
RNU6-541P-201ENST00000384709 B2RBV5 119 aa3.73□□□□□ -1.81
RNU6-541P-201ENST00000384709 SRGAP3O43295 1099 aa3.73□□□□□ -1.81
RNU6-541P-201ENST00000384709 VAMP4O75379 141 aa3.73□□□□□ -1.81
RNU6-541P-201ENST00000384709 TBC1D8O95759 1140 aa3.73□□□□□ -1.81
RNU6-541P-201ENST00000384709 CD3EP07766 207 aa3.73□□□□□ -1.81
RNU6-541P-201ENST00000384709 HOXC12P31275 282 aa3.73□□□□□ -1.81
RNU6-541P-201ENST00000384709 MVKQ03426 396 aa3.73□□□□□ -1.81
RNU6-541P-201ENST00000384709 SERINC3Q13530 473 aa3.73□□□□□ -1.81
RNU6-541P-201ENST00000384709 MLANAQ16655 118 aa3.73□□□□□ -1.81
RNU6-541P-201ENST00000384709 SLC10A6Q3KNW5 377 aa3.73□□□□□ -1.81
RNU6-541P-201ENST00000384709 GTF2IRD2BQ6EKJ0 949 aa3.73□□□□□ -1.81
RNU6-541P-201ENST00000384709 ADAT2Q7Z6V5 191 aaKnown RBP3.73□□□□□ -1.81
RNU6-541P-201ENST00000384709 GTF2IRD2Q86UP8 949 aa3.73□□□□□ -1.81
RNU6-541P-201ENST00000384709 KREMEN2Q8NCW0 462 aa3.73□□□□□ -1.81
RNU6-541P-201ENST00000384709 ADCY4Q8NFM4 1077 aa3.73□□□□□ -1.81
RNU6-541P-201ENST00000384709 NPLOC4Q8TAT6 608 aa3.73□□□□□ -1.81
RNU6-541P-201ENST00000384709 CCDC140Q96MF4 163 aa3.73□□□□□ -1.81
RNU6-541P-201ENST00000384709 SLC26A8Q96RN1 970 aa3.73□□□□□ -1.81
RNU6-541P-201ENST00000384709 KRTAP9-3Q9BYQ3 159 aa3.73□□□□□ -1.81
RNU6-541P-201ENST00000384709 CCDC113Q9H0I3 377 aa3.73□□□□□ -1.81
RNU6-541P-201ENST00000384709 FAM86C1Q9NVL1 165 aa3.73□□□□□ -1.81
RNU6-541P-201ENST00000384709 GPR160Q9UJ42 338 aa3.73□□□□□ -1.81
RNU6-541P-201ENST00000384709 BACE2Q9Y5Z0 518 aa3.73□□□□□ -1.81
RNU6-541P-201ENST00000384709 OR14I1A6ND48 311 aa3.72□□□□□ -1.81
RNU6-541P-201ENST00000384709 NOP56O00567 594 aaKnown RBP3.72□□□□□ -1.81
RNU6-541P-201ENST00000384709 SEMA7AO75326 666 aa3.72□□□□□ -1.81
RNU6-541P-201ENST00000384709 DDAH1O94760 285 aa3.72□□□□□ -1.81
RNU6-541P-201ENST00000384709 STK10O94804 968 aaKnown RBP3.72□□□□□ -1.81
RNU6-541P-201ENST00000384709 TSPAN15O95858 294 aa3.72□□□□□ -1.81
RNU6-541P-201ENST00000384709 ITGAVP06756 1048 aa3.72□□□□□ -1.81
RNU6-541P-201ENST00000384709 C8AP07357 584 aa3.72□□□□□ -1.81
RNU6-541P-201ENST00000384709 ATP2B1P20020 1258 aa3.72□□□□□ -1.81
RNU6-541P-201ENST00000384709 GLDCP23378 1020 aa3.72□□□□□ -1.81
RNU6-541P-201ENST00000384709 L1CAMP32004 1257 aa3.72□□□□□ -1.81
RNU6-541P-201ENST00000384709 RASGRF1Q13972 1273 aa3.72□□□□□ -1.81
RNU6-541P-201ENST00000384709 PPP2R5DQ14738 602 aa3.72□□□□□ -1.81
RNU6-541P-201ENST00000384709 SLC14A2Q15849 920 aa3.72□□□□□ -1.81
RNU6-541P-201ENST00000384709 ACBD5Q5T8D3 534 aaPredicted RBP3.72□□□□□ -1.81
RNU6-541P-201ENST00000384709 LARP1BQ659C4 914 aaKnown RBP3.72□□□□□ -1.81
RNU6-541P-201ENST00000384709 E4F1Q66K89 784 aaPredicted RBP3.72□□□□□ -1.81
RNU6-541P-201ENST00000384709 EEPD1Q7L9B9 569 aa3.72□□□□□ -1.81
RNU6-541P-201ENST00000384709 LRP10Q7Z4F1 713 aa3.72□□□□□ -1.81
RNU6-541P-201ENST00000384709 ZNF227Q86WZ6 799 aa3.72□□□□□ -1.81
RNU6-541P-201ENST00000384709 Q8N1Y9 231 aa3.72□□□□□ -1.81
RNU6-541P-201ENST00000384709 MKL1Q969V6 931 aa3.72□□□□□ -1.81
RNU6-541P-201ENST00000384709 C1orf159Q96HA4 380 aa3.72□□□□□ -1.81
RNU6-541P-201ENST00000384709 PPP1R16BQ96T49 567 aa3.72□□□□□ -1.81
RNU6-541P-201ENST00000384709 MTA3Q9BTC8 594 aa3.72□□□□□ -1.81
RNU6-541P-201ENST00000384709 HIRIP3Q9BW71 556 aaPredicted RBP3.72□□□□□ -1.81
RNU6-541P-201ENST00000384709 MCOLN1Q9GZU1 580 aa3.72□□□□□ -1.81
RNU6-541P-201ENST00000384709 EPB41L4BQ9H329 900 aa3.72□□□□□ -1.81
RNU6-541P-201ENST00000384709 SIRPGQ9P1W8 387 aa3.72□□□□□ -1.81
RNU6-541P-201ENST00000384709 IRS2Q9Y4H2 1338 aa3.71□□□□□ -1.81
RNU6-541P-201ENST00000384709 TEX51A0A1B0GUA7 166 aa3.71□□□□□ -1.82
RNU6-541P-201ENST00000384709 MYOCOSA0A1B0GUC4 107 aa3.71□□□□□ -1.82
RNU6-541P-201ENST00000384709 ARNTLO00327 626 aa3.71□□□□□ -1.82
RNU6-541P-201ENST00000384709 ABLIM1O14639 778 aa3.71□□□□□ -1.82
RNU6-541P-201ENST00000384709 KCNH1O95259 989 aa3.71□□□□□ -1.82
RNU6-541P-201ENST00000384709 CPP00450 1065 aa3.71□□□□□ -1.82
RNU6-541P-201ENST00000384709 MSL3P1P0C860 447 aa3.71□□□□□ -1.82
RNU6-541P-201ENST00000384709 PRKCAP17252 672 aa3.71□□□□□ -1.82
RNU6-541P-201ENST00000384709 PAMP19021 973 aa3.71□□□□□ -1.82
RNU6-541P-201ENST00000384709 GFRA1P56159 465 aa3.71□□□□□ -1.82
RNU6-541P-201ENST00000384709 KIR3DS1Q14943 382 aa3.71□□□□□ -1.82
RNU6-541P-201ENST00000384709 IQCEQ6IPM2 695 aa3.71□□□□□ -1.82
RNU6-541P-201ENST00000384709 MPZL3Q6UWV2 235 aa3.71□□□□□ -1.82
RNU6-541P-201ENST00000384709 CKAP2LQ8IYA6 745 aa3.71□□□□□ -1.82
RNU6-541P-201ENST00000384709 JMYQ8N9B5 988 aa3.71□□□□□ -1.82
RNU6-541P-201ENST00000384709 FRS2Q8WU20 508 aa3.71□□□□□ -1.82
RNU6-541P-201ENST00000384709 TANGO6Q9C0B7 1094 aa3.71□□□□□ -1.82
RNU6-541P-201ENST00000384709 NSUN3Q9H649 340 aaKnown RBP3.71□□□□□ -1.82
RNU6-541P-201ENST00000384709 GCM1Q9NP62 436 aa3.71□□□□□ -1.82
RNU6-541P-201ENST00000384709 DCP1AQ9NPI6 582 aaPredicted RBP3.71□□□□□ -1.82
RNU6-541P-201ENST00000384709 PDLIM7Q9NR12 457 aa3.71□□□□□ -1.82
RNU6-541P-201ENST00000384709 KLHL14Q9P2G3 628 aa3.71□□□□□ -1.82
RNU6-541P-201ENST00000384709 IMPACTQ9P2X3 320 aa3.71□□□□□ -1.82
RNU6-541P-201ENST00000384709 SUGT1Q9Y2Z0 365 aa3.71□□□□□ -1.82
RNU6-541P-201ENST00000384709 NPFFR2Q9Y5X5 522 aa3.71□□□□□ -1.82
RNU6-541P-201ENST00000384709 TAF6LQ9Y6J9 622 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms