RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 NUTM2BA6NNL0 878 aaPredicted RBP20.81■□□□□ 0.92
PRDM1-202ENST00000369091 NUTM2EB1AL46 878 aaPredicted RBP20.81■□□□□ 0.92
PRDM1-202ENST00000369091 HMGB1P1B2RPK0 211 aaPredicted RBP20.81■□□□□ 0.92
PRDM1-202ENST00000369091 MGRN1O60291 552 aa20.81■□□□□ 0.92
PRDM1-202ENST00000369091 BUB1BO60566 1050 aaPredicted RBP20.81■□□□□ 0.92
PRDM1-202ENST00000369091 ELF3P78545 371 aaPredicted RBP20.81■□□□□ 0.92
PRDM1-202ENST00000369091 XRCC4Q13426 336 aa20.81■□□□□ 0.92
PRDM1-202ENST00000369091 PPP4R3AQ6IN85 833 aa20.81■□□□□ 0.92
PRDM1-202ENST00000369091 CD302Q8IX05 232 aa20.81■□□□□ 0.92
PRDM1-202ENST00000369091 ARMC2Q8NEN0 867 aa20.81■□□□□ 0.92
PRDM1-202ENST00000369091 LMBR1Q8WVP7 490 aa20.81■□□□□ 0.92
PRDM1-202ENST00000369091 HVCN1Q96D96 273 aa20.81■□□□□ 0.92
PRDM1-202ENST00000369091 RSRC1Q96IZ7 334 aaKnown RBP20.81■□□□□ 0.92
PRDM1-202ENST00000369091 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.81■□□□□ 0.92
PRDM1-202ENST00000369091 PAFAH1B1P43034 410 aa20.8■□□□□ 0.92
PRDM1-202ENST00000369091 PAK2Q13177 524 aa20.8■□□□□ 0.92
PRDM1-202ENST00000369091 RTN1Q16799 776 aa20.8■□□□□ 0.92
PRDM1-202ENST00000369091 AMOTQ4VCS5 1084 aa20.8■□□□□ 0.92
PRDM1-202ENST00000369091 IFIH1Q9BYX4 1025 aaKnown RBP20.8■□□□□ 0.92
PRDM1-202ENST00000369091 RBM28Q9NW13 759 aaKnown RBP20.8■□□□□ 0.92
PRDM1-202ENST00000369091 ZSWIM5Q9P217 1185 aa20.8■□□□□ 0.92
PRDM1-202ENST00000369091 TBC1D2BQ9UPU7 963 aa20.8■□□□□ 0.92
PRDM1-202ENST00000369091 SPA17Q15506 151 aa20.8■□□□□ 0.92
PRDM1-202ENST00000369091 GLE1Q53GS7 698 aaKnown RBP20.8■□□□□ 0.92
PRDM1-202ENST00000369091 ZNF658Q5TYW1 1059 aaPredicted RBP20.8■□□□□ 0.92
PRDM1-202ENST00000369091 MSL1Q68DK7 614 aa20.8■□□□□ 0.92
PRDM1-202ENST00000369091 CCDC170Q8IYT3 715 aa20.8■□□□□ 0.92
PRDM1-202ENST00000369091 PARD3BQ8TEW8 1205 aa20.8■□□□□ 0.92
PRDM1-202ENST00000369091 SALL4Q9UJQ4 1053 aa20.8■□□□□ 0.92
PRDM1-202ENST00000369091 TRAPPC3O43617 180 aa20.79■□□□□ 0.92
PRDM1-202ENST00000369091 TCP1P17987 556 aaKnown RBP20.79■□□□□ 0.92
PRDM1-202ENST00000369091 SLC8A3P57103 927 aa20.79■□□□□ 0.92
PRDM1-202ENST00000369091 TYW1BQ6NUM6 668 aa20.79■□□□□ 0.92
PRDM1-202ENST00000369091 HIBCHQ6NVY1 386 aaPredicted RBP20.79■□□□□ 0.92
PRDM1-202ENST00000369091 PDXDC2PQ6P474 469 aa20.79■□□□□ 0.92
PRDM1-202ENST00000369091 TTLL7Q6ZT98 887 aa20.79■□□□□ 0.92
PRDM1-202ENST00000369091 ZNF496Q96IT1 587 aaPredicted RBP20.79■□□□□ 0.92
PRDM1-202ENST00000369091 CCDC42Q96M95 316 aa20.79■□□□□ 0.92
PRDM1-202ENST00000369091 TSGA10Q9BZW7 698 aa20.79■□□□□ 0.92
PRDM1-202ENST00000369091 TMBIM4Q9HC24 238 aa20.79■□□□□ 0.92
PRDM1-202ENST00000369091 KLHL33A6NCF5 533 aa20.79■□□□□ 0.92
PRDM1-202ENST00000369091 ENO4A6NNW6 628 aa20.79■□□□□ 0.92
PRDM1-202ENST00000369091 RPN1P04843 607 aaKnown RBP20.79■□□□□ 0.92
PRDM1-202ENST00000369091 RCSD1Q6JBY9 416 aa20.79■□□□□ 0.92
PRDM1-202ENST00000369091 CALR3Q96L12 384 aaKnown RBP20.79■□□□□ 0.92
PRDM1-202ENST00000369091 AMOTL2Q9Y2J4 779 aa20.79■□□□□ 0.92
PRDM1-202ENST00000369091 PCDHA13Q9Y5I0 950 aa20.79■□□□□ 0.92
PRDM1-202ENST00000369091 H7C1D1 291 aa20.78■□□□□ 0.92
PRDM1-202ENST00000369091 PRDM1O75626 825 aa20.78■□□□□ 0.92
PRDM1-202ENST00000369091 TCIRG1Q13488 830 aa20.78■□□□□ 0.92
PRDM1-202ENST00000369091 NBPF20Q3BBV1 942 aa20.78■□□□□ 0.92
PRDM1-202ENST00000369091 CACNA2D3Q8IZS8 1091 aa20.78■□□□□ 0.92
PRDM1-202ENST00000369091 MAB21L3Q8N8X9 362 aa20.78■□□□□ 0.92
PRDM1-202ENST00000369091 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.78■□□□□ 0.92
PRDM1-202ENST00000369091 NUP133Q8WUM0 1156 aa20.78■□□□□ 0.92
PRDM1-202ENST00000369091 NUP58Q9BVL2 599 aa20.78■□□□□ 0.92
PRDM1-202ENST00000369091 SLC39A2Q9NP94 309 aa20.78■□□□□ 0.92
PRDM1-202ENST00000369091 CNOT8Q9UFF9 292 aaKnown RBP20.78■□□□□ 0.92
PRDM1-202ENST00000369091 L3MBTL1Q9Y468 752 aa20.78■□□□□ 0.92
PRDM1-202ENST00000369091 MYH10P35580 1976 aa20.78■□□□□ 0.92
PRDM1-202ENST00000369091 PHF20L1A8MW92 1017 aa20.78■□□□□ 0.92
PRDM1-202ENST00000369091 DEXIO95424 95 aa20.78■□□□□ 0.92
PRDM1-202ENST00000369091 LTKP29376 864 aa20.78■□□□□ 0.92
PRDM1-202ENST00000369091 RNASE9P60153 205 aaKnown RBP20.78■□□□□ 0.92
PRDM1-202ENST00000369091 KCNB1Q14721 858 aa20.78■□□□□ 0.92
PRDM1-202ENST00000369091 RRP12Q5JTH9 1297 aaKnown RBP20.78■□□□□ 0.92
PRDM1-202ENST00000369091 CRACR2BQ8N4Y2 399 aaPredicted RBP20.78■□□□□ 0.92
PRDM1-202ENST00000369091 UBAC1Q9BSL1 405 aa20.78■□□□□ 0.92
PRDM1-202ENST00000369091 SLC12A6Q9UHW9 1150 aa20.78■□□□□ 0.92
PRDM1-202ENST00000369091 SPEF2Q9C093 1822 aa20.77■□□□□ 0.92
PRDM1-202ENST00000369091 NKRFO15226 690 aaKnown RBP eCLIP20.77■□□□□ 0.92
PRDM1-202ENST00000369091 GTPBP6O43824 516 aaPredicted RBP20.77■□□□□ 0.92
PRDM1-202ENST00000369091 USO1O60763 962 aaKnown RBP20.77■□□□□ 0.92
PRDM1-202ENST00000369091 SRGNP10124 158 aa20.77■□□□□ 0.92
PRDM1-202ENST00000369091 IFFO1Q0D2I5 559 aa20.77■□□□□ 0.92
PRDM1-202ENST00000369091 CUL5Q93034 780 aa20.77■□□□□ 0.92
PRDM1-202ENST00000369091 TRIM47Q96LD4 638 aa20.77■□□□□ 0.92
PRDM1-202ENST00000369091 CCDC85AQ96PX6 553 aaPredicted RBP20.77■□□□□ 0.92
PRDM1-202ENST00000369091 TLR10Q9BXR5 811 aa20.77■□□□□ 0.92
PRDM1-202ENST00000369091 CEP126Q9P2H0 1117 aa20.77■□□□□ 0.92
PRDM1-202ENST00000369091 PLEKHG1Q9ULL1 1385 aa20.77■□□□□ 0.92
PRDM1-202ENST00000369091 BUB1O43683 1085 aa20.77■□□□□ 0.92
PRDM1-202ENST00000369091 AP1G2O75843 785 aa20.77■□□□□ 0.92
PRDM1-202ENST00000369091 PRLRP16471 622 aa20.77■□□□□ 0.92
PRDM1-202ENST00000369091 CEBPAP49715 358 aaPredicted RBP20.77■□□□□ 0.92
PRDM1-202ENST00000369091 ZBED6P86452 979 aa20.77■□□□□ 0.92
PRDM1-202ENST00000369091 PPP1R7Q15435 360 aa20.77■□□□□ 0.92
PRDM1-202ENST00000369091 CDCA2Q69YH5 1023 aaPredicted RBP20.77■□□□□ 0.92
PRDM1-202ENST00000369091 MREGQ8N565 214 aa20.77■□□□□ 0.92
PRDM1-202ENST00000369091 ZBTB10Q96DT7 871 aa20.77■□□□□ 0.92
PRDM1-202ENST00000369091 KRT12Q99456 494 aa20.77■□□□□ 0.92
PRDM1-202ENST00000369091 SPATS2LQ9NUQ6 558 aaKnown RBP20.77■□□□□ 0.92
PRDM1-202ENST00000369091 TMEM2Q9UHN6 1383 aa20.77■□□□□ 0.92
PRDM1-202ENST00000369091 LACTB2Q53H82 288 aaPredicted RBP20.76■□□□□ 0.91
PRDM1-202ENST00000369091 CHADLQ6NUI6 762 aa20.76■□□□□ 0.91
PRDM1-202ENST00000369091 BZW1Q7L1Q6 419 aaKnown RBP20.76■□□□□ 0.91
PRDM1-202ENST00000369091 CCT6BQ92526 530 aa20.76■□□□□ 0.91
PRDM1-202ENST00000369091 RAPGEF5Q92565 580 aa20.76■□□□□ 0.91
PRDM1-202ENST00000369091 EXOC1Q9NV70 894 aa20.76■□□□□ 0.91
PRDM1-202ENST00000369091 CDC37Q16543 378 aaPredicted RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms