RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 C17orf99Q6UX52 265 aa29.26■■■□□ 2.27
SSBP3-202ENST00000357475 GTF3C2Q8WUA4 911 aaPredicted RBP29.26■■■□□ 2.27
SSBP3-202ENST00000357475 CLEC4DQ8WXI8 215 aa29.26■■■□□ 2.27
SSBP3-202ENST00000357475 WASF1Q92558 559 aa29.26■■■□□ 2.27
SSBP3-202ENST00000357475 ALDH1A1P00352 501 aa29.25■■■□□ 2.27
SSBP3-202ENST00000357475 GPRC5AQ8NFJ5 357 aa29.25■■■□□ 2.27
SSBP3-202ENST00000357475 PORCNQ9H237 461 aa29.25■■■□□ 2.27
SSBP3-202ENST00000357475 ZSWIM8A7E2V4 1837 aa29.25■■■□□ 2.27
SSBP3-202ENST00000357475 NFIBO00712 420 aa29.25■■■□□ 2.27
SSBP3-202ENST00000357475 RIOX2Q8IUF8 465 aa29.25■■■□□ 2.27
SSBP3-202ENST00000357475 TBC1D5Q92609 795 aa29.25■■■□□ 2.27
SSBP3-202ENST00000357475 TRERF1Q96PN7 1200 aa29.25■■■□□ 2.27
SSBP3-202ENST00000357475 RNF146Q9NTX7 359 aa29.25■■■□□ 2.27
SSBP3-202ENST00000357475 DAXXQ9UER7 740 aaPredicted RBP29.25■■■□□ 2.27
SSBP3-202ENST00000357475 FAM110CQ1W6H9 321 aa29.24■■■□□ 2.27
SSBP3-202ENST00000357475 C8orf76Q96K31 380 aa29.24■■■□□ 2.27
SSBP3-202ENST00000357475 ABCB11O95342 1321 aa29.24■■■□□ 2.27
SSBP3-202ENST00000357475 ECM2O94769 699 aaPredicted RBP29.23■■■□□ 2.27
SSBP3-202ENST00000357475 NPY5RQ15761 445 aa29.23■■■□□ 2.27
SSBP3-202ENST00000357475 LARP1BQ659C4 914 aaKnown RBP29.23■■■□□ 2.27
SSBP3-202ENST00000357475 KRT40Q6A162 431 aa29.23■■■□□ 2.27
SSBP3-202ENST00000357475 EFCC1Q9HA90 598 aa29.23■■■□□ 2.27
SSBP3-202ENST00000357475 hCG_1984214I3L0E3 225 aa29.22■■■□□ 2.27
SSBP3-202ENST00000357475 ERCC3P19447 782 aa29.22■■■□□ 2.27
SSBP3-202ENST00000357475 SYT1P21579 422 aa29.22■■■□□ 2.27
SSBP3-202ENST00000357475 PKP1Q13835 747 aa29.22■■■□□ 2.27
SSBP3-202ENST00000357475 NCAPG2Q86XI2 1143 aa29.22■■■□□ 2.27
SSBP3-202ENST00000357475 ZNF713Q8N859 430 aaPredicted RBP29.22■■■□□ 2.27
SSBP3-202ENST00000357475 PHF20Q9BVI0 1012 aa29.22■■■□□ 2.27
SSBP3-202ENST00000357475 SH3GLB2Q9NR46 395 aa29.22■■■□□ 2.27
SSBP3-202ENST00000357475 SMCO2A6NFE2 343 aa29.21■■■□□ 2.27
SSBP3-202ENST00000357475 FBXO18Q8NFZ0 1043 aa29.21■■■□□ 2.27
SSBP3-202ENST00000357475 PLXNB2O15031 1838 aa29.21■■■□□ 2.27
SSBP3-202ENST00000357475 NLRP5P59047 1200 aa29.2■■■□□ 2.27
SSBP3-202ENST00000357475 PPP1R18Q6NYC8 613 aa29.2■■■□□ 2.27
SSBP3-202ENST00000357475 ZMYND12Q9H0C1 365 aa29.2■■■□□ 2.27
SSBP3-202ENST00000357475 MRPL11Q9Y3B7 192 aaKnown RBP29.2■■■□□ 2.27
SSBP3-202ENST00000357475 LCTP09848 1927 aa29.2■■■□□ 2.26
SSBP3-202ENST00000357475 DDIT3P35638 169 aa29.2■■■□□ 2.26
SSBP3-202ENST00000357475 OXER1Q8TDS5 423 aa29.2■■■□□ 2.26
SSBP3-202ENST00000357475 KIF3AQ9Y496 699 aa29.2■■■□□ 2.26
SSBP3-202ENST00000357475 MGAMO43451 1857 aa29.19■■■□□ 2.26
SSBP3-202ENST00000357475 UBE2SQ16763 222 aa29.19■■■□□ 2.26
SSBP3-202ENST00000357475 CFHR5Q9BXR6 569 aa29.19■■■□□ 2.26
SSBP3-202ENST00000357475 CWC22Q9HCG8 908 aaKnown RBP29.19■■■□□ 2.26
SSBP3-202ENST00000357475 ZNFX1Q9P2E3 1918 aaKnown RBP29.18■■■□□ 2.26
SSBP3-202ENST00000357475 MMP1P03956 469 aa29.18■■■□□ 2.26
SSBP3-202ENST00000357475 TRIM29Q14134 588 aa29.18■■■□□ 2.26
SSBP3-202ENST00000357475 TKFCQ3LXA3 575 aa29.18■■■□□ 2.26
SSBP3-202ENST00000357475 USP17L6PQ6QN14 398 aa29.18■■■□□ 2.26
SSBP3-202ENST00000357475 CCDC148Q8NFR7 591 aa29.18■■■□□ 2.26
SSBP3-202ENST00000357475 RASGRP4Q8TDF6 673 aa29.18■■■□□ 2.26
SSBP3-202ENST00000357475 ACAD9Q9H845 621 aa29.18■■■□□ 2.26
SSBP3-202ENST00000357475 PSTPIP2Q9H939 334 aa29.18■■■□□ 2.26
SSBP3-202ENST00000357475 TSKSQ9UJT2 592 aa29.18■■■□□ 2.26
SSBP3-202ENST00000357475 PNMA2Q9UL42 364 aa29.18■■■□□ 2.26
SSBP3-202ENST00000357475 ESYT2A0FGR8 921 aa29.17■■■□□ 2.26
SSBP3-202ENST00000357475 SLC25A27O95847 323 aa29.17■■■□□ 2.26
SSBP3-202ENST00000357475 CTGFP29279 349 aa29.17■■■□□ 2.26
SSBP3-202ENST00000357475 HOXA13P31271 388 aaPredicted RBP29.17■■■□□ 2.26
SSBP3-202ENST00000357475 ADCY7P51828 1080 aa29.17■■■□□ 2.26
SSBP3-202ENST00000357475 WDR78Q5VTH9 848 aa29.17■■■□□ 2.26
SSBP3-202ENST00000357475 CCDC12Q8WUD4 166 aaPredicted RBP29.17■■■□□ 2.26
SSBP3-202ENST00000357475 RIC8AQ9NPQ8 531 aa29.17■■■□□ 2.26
SSBP3-202ENST00000357475 TMEM260Q9NX78 707 aa29.17■■■□□ 2.26
SSBP3-202ENST00000357475 DOCK3Q8IZD9 2030 aa29.17■■■□□ 2.26
SSBP3-202ENST00000357475 VPS37CA5D8V6 355 aaPredicted RBP29.16■■■□□ 2.26
SSBP3-202ENST00000357475 MEIS2O14770 477 aa29.16■■■□□ 2.26
SSBP3-202ENST00000357475 CFBP00751 764 aa29.16■■■□□ 2.26
SSBP3-202ENST00000357475 XBP1P17861 261 aa29.16■■■□□ 2.26
SSBP3-202ENST00000357475 CCNA1P78396 465 aa29.16■■■□□ 2.26
SSBP3-202ENST00000357475 CAP1Q01518 475 aa29.16■■■□□ 2.26
SSBP3-202ENST00000357475 TRAF1Q13077 416 aa29.16■■■□□ 2.26
SSBP3-202ENST00000357475 NOM1Q5C9Z4 860 aaKnown RBP29.16■■■□□ 2.26
SSBP3-202ENST00000357475 SLC30A10Q6XR72 485 aa29.16■■■□□ 2.26
SSBP3-202ENST00000357475 SHCBP1Q8NEM2 672 aa29.16■■■□□ 2.26
SSBP3-202ENST00000357475 CHST13Q8NET6 341 aa29.16■■■□□ 2.26
SSBP3-202ENST00000357475 A1CFQ9NQ94 594 aaKnown RBP29.16■■■□□ 2.26
SSBP3-202ENST00000357475 PCDHA4Q9UN74 947 aa29.16■■■□□ 2.26
SSBP3-202ENST00000357475 MTMR6Q9Y217 621 aa29.16■■■□□ 2.26
SSBP3-202ENST00000357475 H3BQV1 296 aa29.15■■■□□ 2.26
SSBP3-202ENST00000357475 STX6O43752 255 aa29.15■■■□□ 2.26
SSBP3-202ENST00000357475 IFFO2Q5TF58 517 aa29.15■■■□□ 2.26
SSBP3-202ENST00000357475 NSMFQ6X4W1 530 aa29.15■■■□□ 2.26
SSBP3-202ENST00000357475 PURBQ96QR8 312 aaKnown RBP29.15■■■□□ 2.26
SSBP3-202ENST00000357475 C6orf50Q9HD87 102 aa29.15■■■□□ 2.26
SSBP3-202ENST00000357475 COL20A1Q9P218 1284 aa29.15■■■□□ 2.26
SSBP3-202ENST00000357475 KIF28PB7ZC32 967 aa29.15■■■□□ 2.26
SSBP3-202ENST00000357475 PDCP20941 246 aa29.15■■■□□ 2.26
SSBP3-202ENST00000357475 MAP2K1Q02750 393 aaPredicted RBP29.15■■■□□ 2.26
SSBP3-202ENST00000357475 NR5A1Q13285 461 aa29.15■■■□□ 2.26
SSBP3-202ENST00000357475 DIS3L2Q8IYB7 885 aaKnown RBP29.15■■■□□ 2.26
SSBP3-202ENST00000357475 CUL5Q93034 780 aa29.15■■■□□ 2.26
SSBP3-202ENST00000357475 PGBD1Q96JS3 809 aa29.15■■■□□ 2.26
SSBP3-202ENST00000357475 ARHGAP39Q9C0H5 1083 aa29.15■■■□□ 2.26
SSBP3-202ENST00000357475 MROH8Q9H579 483 aa29.15■■■□□ 2.26
SSBP3-202ENST00000357475 BIN2Q9UBW5 565 aaPredicted RBP29.15■■■□□ 2.26
SSBP3-202ENST00000357475 BTBD18B2RXH4 712 aa29.14■■■□□ 2.25
SSBP3-202ENST00000357475 M0R2N6 131 aa29.14■■■□□ 2.25
SSBP3-202ENST00000357475 BAATQ14032 418 aaPredicted RBP29.14■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms