RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 ROBO3Q96MS0 1386 aa19.96■□□□□ 0.79
IFFO1-201ENST00000336604 CCNT1O60563 726 aaKnown RBP19.95■□□□□ 0.78
IFFO1-201ENST00000336604 RPS6KA4O75676 772 aa19.95■□□□□ 0.78
IFFO1-201ENST00000336604 LMAN1P49257 510 aa19.95■□□□□ 0.78
IFFO1-201ENST00000336604 NAPAP54920 295 aa19.95■□□□□ 0.78
IFFO1-201ENST00000336604 AMOTL1Q8IY63 956 aa19.95■□□□□ 0.78
IFFO1-201ENST00000336604 AGPAT5Q9NUQ2 364 aa19.95■□□□□ 0.78
IFFO1-201ENST00000336604 RSPH14Q9UHP6 348 aa19.95■□□□□ 0.78
IFFO1-201ENST00000336604 MYO6Q9UM54 1294 aa19.95■□□□□ 0.78
IFFO1-201ENST00000336604 CCDC88AQ3V6T2 1871 aa19.95■□□□□ 0.78
IFFO1-201ENST00000336604 A0A1W2PQC6 194 aa19.95■□□□□ 0.78
IFFO1-201ENST00000336604 KLK7P49862 253 aa19.95■□□□□ 0.78
IFFO1-201ENST00000336604 VSNL1P62760 191 aa19.95■□□□□ 0.78
IFFO1-201ENST00000336604 GALNT17Q6IS24 598 aa19.95■□□□□ 0.78
IFFO1-201ENST00000336604 CABP7Q86V35 215 aa19.95■□□□□ 0.78
IFFO1-201ENST00000336604 HNRNPLLQ8WVV9 542 aaKnown RBP19.95■□□□□ 0.78
IFFO1-201ENST00000336604 DUSP9Q99956 384 aaKnown RBP19.95■□□□□ 0.78
IFFO1-201ENST00000336604 TUBGCP2Q9BSJ2 902 aa19.95■□□□□ 0.78
IFFO1-201ENST00000336604 ABCB6Q9NP58 842 aa19.95■□□□□ 0.78
IFFO1-201ENST00000336604 MAGEC2Q9UBF1 373 aaPredicted RBP19.95■□□□□ 0.78
IFFO1-201ENST00000336604 CAPN11Q9UMQ6 739 aa19.95■□□□□ 0.78
IFFO1-201ENST00000336604 BAG3O95817 575 aa19.94■□□□□ 0.78
IFFO1-201ENST00000336604 WHAMMP3Q1A5X7 153 aa19.94■□□□□ 0.78
IFFO1-201ENST00000336604 CCDC178Q5BJE1 867 aa19.94■□□□□ 0.78
IFFO1-201ENST00000336604 TCP11L1Q9NUJ3 509 aa19.94■□□□□ 0.78
IFFO1-201ENST00000336604 HDAC6Q9UBN7 1215 aa19.94■□□□□ 0.78
IFFO1-201ENST00000336604 MAST2Q6P0Q8 1798 aa19.94■□□□□ 0.78
IFFO1-201ENST00000336604 LAD1O00515 517 aa19.94■□□□□ 0.78
IFFO1-201ENST00000336604 NKRFO15226 690 aaKnown RBP eCLIP19.94■□□□□ 0.78
IFFO1-201ENST00000336604 MYL1P05976 194 aa19.94■□□□□ 0.78
IFFO1-201ENST00000336604 HERVK_113P62684 666 aa19.94■□□□□ 0.78
IFFO1-201ENST00000336604 PIP4K2BP78356 416 aa19.94■□□□□ 0.78
IFFO1-201ENST00000336604 STK4Q13043 487 aa19.94■□□□□ 0.78
IFFO1-201ENST00000336604 TMED8Q6PL24 325 aaPredicted RBP19.94■□□□□ 0.78
IFFO1-201ENST00000336604 USP17L2Q6R6M4 530 aa19.94■□□□□ 0.78
IFFO1-201ENST00000336604 TRIM9Q9C026 710 aa19.94■□□□□ 0.78
IFFO1-201ENST00000336604 ZMYND12Q9H0C1 365 aa19.94■□□□□ 0.78
IFFO1-201ENST00000336604 FCER1AP12319 257 aa19.93■□□□□ 0.78
IFFO1-201ENST00000336604 PRPHP41219 470 aa19.93■□□□□ 0.78
IFFO1-201ENST00000336604 HPS3Q969F9 1004 aa19.93■□□□□ 0.78
IFFO1-201ENST00000336604 RASSF4Q9H2L5 321 aa19.93■□□□□ 0.78
IFFO1-201ENST00000336604 OR52Z1P0C646 297 aa19.93■□□□□ 0.78
IFFO1-201ENST00000336604 TRIM21P19474 475 aaKnown RBP19.93■□□□□ 0.78
IFFO1-201ENST00000336604 TECP42680 631 aa19.93■□□□□ 0.78
IFFO1-201ENST00000336604 PDE4DQ08499 809 aa19.93■□□□□ 0.78
IFFO1-201ENST00000336604 ANKRD40Q6AI12 368 aa19.93■□□□□ 0.78
IFFO1-201ENST00000336604 ARHGEF1Q92888 912 aaKnown RBP19.93■□□□□ 0.78
IFFO1-201ENST00000336604 VAT1LQ9HCJ6 419 aa19.93■□□□□ 0.78
IFFO1-201ENST00000336604 PDE11AQ9HCR9 933 aa19.93■□□□□ 0.78
IFFO1-201ENST00000336604 SMCO2A6NFE2 343 aa19.92■□□□□ 0.78
IFFO1-201ENST00000336604 POTEB2H3BUK9 544 aa19.92■□□□□ 0.78
IFFO1-201ENST00000336604 SRGNP10124 158 aa19.92■□□□□ 0.78
IFFO1-201ENST00000336604 DNM2P50570 870 aa19.92■□□□□ 0.78
IFFO1-201ENST00000336604 TSR1Q2NL82 804 aaKnown RBP19.92■□□□□ 0.78
IFFO1-201ENST00000336604 MUM1L1Q5H9M0 696 aa19.92■□□□□ 0.78
IFFO1-201ENST00000336604 CCDC122Q5T0U0 273 aa19.92■□□□□ 0.78
IFFO1-201ENST00000336604 L1RE1Q9UN81 338 aa19.92■□□□□ 0.78
IFFO1-201ENST00000336604 RASSF10A6NK89 507 aa19.92■□□□□ 0.78
IFFO1-201ENST00000336604 MYO1CO00159 1063 aa19.92■□□□□ 0.78
IFFO1-201ENST00000336604 RGL2O15211 777 aa19.92■□□□□ 0.78
IFFO1-201ENST00000336604 ASIC1P78348 528 aa19.92■□□□□ 0.78
IFFO1-201ENST00000336604 EYA3Q99504 573 aa19.92■□□□□ 0.78
IFFO1-201ENST00000336604 EXOC1Q9NV70 894 aa19.92■□□□□ 0.78
IFFO1-201ENST00000336604 PPP4CP60510 307 aa19.91■□□□□ 0.78
IFFO1-201ENST00000336604 NONOQ15233 471 aaKnown RBP eCLIP19.91■□□□□ 0.78
IFFO1-201ENST00000336604 P2RX5Q93086 422 aa19.91■□□□□ 0.78
IFFO1-201ENST00000336604 DHTKD1Q96HY7 919 aaPredicted RBP19.91■□□□□ 0.78
IFFO1-201ENST00000336604 RTFDC1Q9BY42 306 aaPredicted RBP19.91■□□□□ 0.78
IFFO1-201ENST00000336604 TTYH3Q9C0H2 523 aa19.91■□□□□ 0.78
IFFO1-201ENST00000336604 HAUS4Q9H6D7 363 aa19.91■□□□□ 0.78
IFFO1-201ENST00000336604 RNF216Q9NWF9 866 aaPredicted RBP19.91■□□□□ 0.78
IFFO1-201ENST00000336604 RTCBQ9Y3I0 505 aaKnown RBP19.91■□□□□ 0.78
IFFO1-201ENST00000336604 SRGAP2O75044 1071 aa19.91■□□□□ 0.78
IFFO1-201ENST00000336604 GSTO1P78417 241 aa19.91■□□□□ 0.78
IFFO1-201ENST00000336604 TBC1D8BQ0IIM8 1120 aa19.91■□□□□ 0.78
IFFO1-201ENST00000336604 HDXQ7Z353 690 aa19.91■□□□□ 0.78
IFFO1-201ENST00000336604 CNOT6LQ96LI5 555 aaKnown RBP19.91■□□□□ 0.78
IFFO1-201ENST00000336604 SPZ1Q9BXG8 430 aa19.91■□□□□ 0.78
IFFO1-201ENST00000336604 ADAM21Q9UKJ8 722 aa19.91■□□□□ 0.78
IFFO1-201ENST00000336604 PSMD14O00487 310 aa19.9■□□□□ 0.78
IFFO1-201ENST00000336604 ERLIN1O75477 346 aa19.9■□□□□ 0.78
IFFO1-201ENST00000336604 ATP1A1P05023 1023 aaKnown RBP19.9■□□□□ 0.78
IFFO1-201ENST00000336604 BTDP43251 543 aa19.9■□□□□ 0.78
IFFO1-201ENST00000336604 CDK8P49336 464 aa19.9■□□□□ 0.78
IFFO1-201ENST00000336604 FAM182BQ5T319 152 aa19.9■□□□□ 0.78
IFFO1-201ENST00000336604 RC3H1Q5TC82 1133 aaKnown RBP19.9■□□□□ 0.78
IFFO1-201ENST00000336604 TRAPPC11Q7Z392 1133 aa19.9■□□□□ 0.78
IFFO1-201ENST00000336604 AK8Q96MA6 479 aa19.9■□□□□ 0.78
IFFO1-201ENST00000336604 RCCD1A6NED2 376 aa19.9■□□□□ 0.78
IFFO1-201ENST00000336604 CCNE1P24864 410 aa19.9■□□□□ 0.78
IFFO1-201ENST00000336604 MEA1Q16626 185 aa19.9■□□□□ 0.78
IFFO1-201ENST00000336604 KRT25Q7Z3Z0 450 aa19.9■□□□□ 0.78
IFFO1-201ENST00000336604 TBCKQ8TEA7 893 aa19.9■□□□□ 0.78
IFFO1-201ENST00000336604 LACRTQ9GZZ8 138 aa19.9■□□□□ 0.78
IFFO1-201ENST00000336604 CUEDC2Q9H467 287 aa19.9■□□□□ 0.78
IFFO1-201ENST00000336604 N4BP1O75113 896 aaKnown RBP19.89■□□□□ 0.78
IFFO1-201ENST00000336604 NEK8Q86SG6 692 aa19.89■□□□□ 0.78
IFFO1-201ENST00000336604 PCMTD1Q96MG8 357 aaPredicted RBP19.89■□□□□ 0.78
IFFO1-201ENST00000336604 LZTS2Q9BRK4 669 aa19.89■□□□□ 0.78
IFFO1-201ENST00000336604 MMTAG2Q9BU76 263 aaKnown RBP19.89■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms