RNA–Protein interactions for RNA: ENSMUST00000223097.1

Ccdc88c-204, Transcript of Protein Daple, mousemouse

TSL 1 (best) BASIC

Gene Ccdc88c, Length 1,253 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-204ENSMUST00000223097 Crb2Q80YA8 1282 aa17.08■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Tmc1Q8R4P5 757 aa17.08■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Eaf2Q91ZD6 262 aa17.08■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Rbm10Q99KG3 930 aaKnown RBP17.08■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 MccE9PWI3 1003 aa17.07■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Acvr2bP27040 536 aa17.07■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 RabggtbP53612 339 aa17.07■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Adamts10P58459 1104 aa17.07■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Neurl1bQ0MW30 546 aa17.07■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Etaa1Q5SVT3 877 aa17.07■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Tcaf3Q6QR59 914 aa17.07■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Fbxo10Q7TQF2 950 aa17.07■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Zbed4Q80WQ9 1168 aa17.07■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Htatsf1Q8BGC0 757 aa17.07■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Pgm5Q8BZF8 567 aa17.07■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Brf1Q8CFK2 676 aa17.07■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Slc12a8Q8VI23 705 aa17.07■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Necab2Q91ZP9 389 aa17.07■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 MutyhQ99P21 515 aa17.07■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Clstn1Q9EPL2 979 aa17.07■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 PatjQ63ZW7 1834 aa17.07■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Gm20425E9Q035 978 aaKnown RBP17.06■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Myl3P09542 204 aa17.06■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Defa-rs2P17534 91 aa17.06■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 PfkmP47857 780 aaKnown RBP17.06■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Defa-rs12P50716 91 aa17.06■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Skap1Q3UUV5 355 aa17.06■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Grxcr1Q50H32 290 aa17.06■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Cnga2Q62398 664 aa17.06■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Dis3lQ8C0S1 1053 aa17.06■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Plcg2Q8CIH5 1265 aa17.06■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Adam1bQ8R534 806 aa17.06■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Stk3Q9JI10 497 aa17.06■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Lnx1O70263 728 aa17.05■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Mt-CybP00158 381 aa17.05■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Lrrc14bQ3UJB3 510 aa17.05■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Ttbk2Q3UVR3 1243 aa17.05■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Ppp2r5bQ6PD28 497 aa17.05■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Moxd2Q7TT41 619 aa17.05■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Map3k11Q80XI6 850 aa17.05■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Ca12Q8CI85 354 aa17.05■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Bmp2kQ91Z96 1138 aa17.05■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Usp26Q99MX1 835 aa17.05■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Bcar3Q9QZK2 820 aa17.05■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Htatip2Q9Z2G9 242 aa17.05■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Rp1l1Q8CGM2 1859 aa17.05■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Cdh23Q99PF4 3354 aa17.05■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Cep295Q8BQ48 2412 aa17.04■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Man1b1A2AJ15 658 aa17.04■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Fam124aD3Z5V4 536 aa17.04■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 PuraP42669 321 aaKnown RBP17.04■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Q3TYL0 343 aa17.04■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Wnt8aQ64527 354 aa17.04■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Sap130Q8BIH0 1057 aa17.04■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 MslnlQ8C160 685 aa17.04■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Alx1Q8C8B0 326 aa17.04■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Calhm6Q8C9E8 313 aa17.04■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Defb36Q8K3U4 67 aa17.04■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Iqsec1Q8R0S2 961 aa17.04■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Prrg2Q8R182 198 aa17.04■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Cluap1Q8R3P7 413 aa17.04■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Adcy3Q8VHH7 1145 aa17.04■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Coa7Q921H9 231 aa17.04■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Foxe3Q9QY14 288 aa17.04■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Dock3Q8CIQ7 2027 aa17.03■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 NfibP97863 570 aaKnown RBP17.03■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Usp50Q6P8X6 390 aa17.03■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Peg10Q7TN75 958 aaKnown RBP17.03■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Tcp11l1Q8BTG3 509 aa17.03■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Six6os1Q9CTN5 574 aa17.03■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Lonrf3Q9D4H7 753 aa17.03■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Tmem47Q9JJG6 181 aa17.03■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 DgkeQ9R1C6 564 aa17.03■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Axin1O35625 863 aa17.02■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Cbfa2t2O70374 594 aa17.02■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Vmn1r209Q5NC97 312 aa17.02■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Tmem151bQ68FE7 561 aa17.02■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Actn1Q7TPR4 892 aaKnown RBP17.02■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Ece2Q80Z60 881 aa17.02■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Lrrc46Q9DAP0 323 aa17.02■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 IkQ9Z1M8 557 aaKnown RBP17.02■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Duxf3A0A0N4SV92 674 aa17.01■□□□□ 0.31
Ccdc88c-204ENSMUST00000223097 Ercc3P49135 783 aa17.01■□□□□ 0.31
Ccdc88c-204ENSMUST00000223097 Mkl2P59759 1080 aa17.01■□□□□ 0.31
Ccdc88c-204ENSMUST00000223097 Kifap3P70188 793 aa17.01■□□□□ 0.31
Ccdc88c-204ENSMUST00000223097 March9Q3TZ87 348 aa17.01■□□□□ 0.31
Ccdc88c-204ENSMUST00000223097 Znf865Q3U3I9 1058 aa17.01■□□□□ 0.31
Ccdc88c-204ENSMUST00000223097 Fam189a2Q4FZH1 290 aa17.01■□□□□ 0.31
Ccdc88c-204ENSMUST00000223097 Vps72Q62481 368 aa17.01■□□□□ 0.31
Ccdc88c-204ENSMUST00000223097 Ccdc85bQ6PDY0 202 aa17.01■□□□□ 0.31
Ccdc88c-204ENSMUST00000223097 Fbxo46Q8BG80 603 aa17.01■□□□□ 0.31
Ccdc88c-204ENSMUST00000223097 Ttc9bQ9D6E4 239 aa17.01■□□□□ 0.31
Ccdc88c-204ENSMUST00000223097 Mbtps1Q9WTZ2 1052 aa17.01■□□□□ 0.31
Ccdc88c-204ENSMUST00000223097 Robo3Q9Z2I4 1366 aa17.01■□□□□ 0.31
Ccdc88c-204ENSMUST00000223097 Cd3dP04235 173 aa17■□□□□ 0.31
Ccdc88c-204ENSMUST00000223097 Bmp8aP34821 399 aa17■□□□□ 0.31
Ccdc88c-204ENSMUST00000223097 Ptpn11P35235 597 aa17■□□□□ 0.31
Ccdc88c-204ENSMUST00000223097 Bmp1P98063 991 aa17■□□□□ 0.31
Ccdc88c-204ENSMUST00000223097 Sox9Q04887 507 aa17■□□□□ 0.31
Ccdc88c-204ENSMUST00000223097 Ccdc125Q5U465 500 aa17■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 33 ms