RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 4932429P05RikA2ADI4 785 aa14.68□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 DgkiD3YWQ0 1071 aa14.68□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Ugt1a8D3Z748 530 aa14.68□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Ugt1a10E9PXN7 530 aa14.68□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Igsf9bE9PZ19 1328 aa14.68□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Rhbdl3P58873 404 aa14.68□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Anks1aP59672 1150 aa14.68□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Evi5P97366 809 aa14.68□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Tfcp2l1Q3UNW5 479 aa14.68□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Dpf2Q61103 391 aaKnown RBP14.68□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Krt9Q6RHW0 743 aa14.68□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Sdccag8Q80UF4 717 aa14.68□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Stac3Q8BZ71 360 aa14.68□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Hgh1Q8C3I8 393 aa14.68□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Calml4Q91WQ9 153 aa14.68□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Apobec3Q99J72 440 aaKnown RBP14.68□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 TbcbQ9D1E6 244 aa14.68□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Ptpn23Q6PB44 1692 aa14.68□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Chmp6P0C0A3 200 aa14.68□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Sept2P42208 361 aaKnown RBP14.68□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Qrich1Q3UA37 777 aa14.68□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Nsrp1Q5NCR9 542 aa14.68□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Krt14Q61781 484 aa14.68□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Nop53Q8BK35 484 aaKnown RBP14.68□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Klhl20Q8VCK5 604 aa14.68□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Mad2l2Q9D752 211 aa14.68□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Naaladl2A0A0N4SUJ3 795 aa14.67□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Skor2A7M7C7 1008 aa14.67□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Rpusd2Q149F1 553 aa14.67□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Slc2a13Q3UHK1 637 aa14.67□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 B4galnt4Q766D5 1034 aa14.67□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Atxn2lQ7TQH0 1049 aaKnown RBP14.67□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Epha10Q8BYG9 1007 aa14.67□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Glrx3Q9CQM9 337 aa14.67□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Tmod2Q9JKK7 351 aa14.67□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Bcl9Q9D219 1425 aa14.67□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 4931408C20RikE9PWP9 1381 aa14.67□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Ap1b1O35643 943 aaKnown RBP14.67□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Npy5rO70342 466 aa14.67□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Art2aP17981 287 aa14.67□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Tmem109Q3UBX0 243 aa14.67□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Mars2Q499X9 586 aaKnown RBP14.67□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 WaplQ65Z40 1200 aaKnown RBP14.67□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Ppm1eQ80TL0 749 aa14.67□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Tubb4bP68372 445 aaKnown RBP14.67□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Kiaa1211Q5PR69 1207 aa14.67□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Zc3h6Q8BYK8 1177 aa14.67□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Smc1aQ9CU62 1233 aaKnown RBP14.67□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Smco2Q9DA21 347 aa14.67□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Eif4enif1Q9EST3 983 aaKnown RBP14.67□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Sipa1l2Q80TE4 1722 aa14.67□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Tex13cD3YU32 604 aa14.66□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Exoc3l2D3YUP5 789 aa14.66□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Apol10bG3X9K7 334 aa14.66□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Psd3Q2PFD7 1037 aa14.66□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Afg3l2Q8JZQ2 802 aaKnown RBP14.66□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Ushbp1Q8R370 680 aa14.66□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Gm5134E9QAB5 671 aa14.66□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Tdo2P48776 406 aa14.66□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Ccna1Q61456 421 aa14.66□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Igsf3Q6ZQA6 1194 aa14.66□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Ccdc25Q78PG9 208 aa14.66□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 OscarQ8VBT3 265 aa14.66□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Tsnaxip1Q99P25 704 aa14.66□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Krt34Q9D646 392 aa14.66□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Prkab1Q9R078 270 aa14.66□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Zfp213E9QAW0 468 aa14.66□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Nedd4P46935 887 aaKnown RBP14.66□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 P4ha1Q60715 534 aa14.66□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Olfr119Q7TRJ5 321 aa14.66□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Erlin2Q8BFZ9 340 aa14.66□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Appl2Q8K3G9 662 aa14.66□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 CsadQ9DBE0 493 aa14.66□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Hs6st3Q9QYK4 470 aa14.66□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Ighmbp2P40694 993 aa14.66□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Gm5935Q497S0 212 aa14.66□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Gas7Q60780 421 aa14.66□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Ifi207E9Q3L4 978 aa14.65□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Dnm2P39054 870 aaKnown RBP14.65□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Fam161bQ8CB59 589 aa14.65□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Tmem60Q8K174 133 aa14.65□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Gm7168A0AUV4 508 aa14.65□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Fbxl16A2RT62 479 aa14.65□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Erlin1Q91X78 346 aa14.65□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Sar1bQ9CQC9 198 aa14.65□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 AatfQ9JKX4 526 aaKnown RBP14.65□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Surf1P09925 306 aa14.65□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Traf5P70191 558 aa14.65□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Slc7a1Q09143 622 aa14.65□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 RalylQ8BTF8 293 aa14.65□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 Q91WD4 421 aa14.65□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 DexiQ9WUQ7 95 aa14.65□□□□□ -0.06
Pdgfra-205ENSMUST00000201711 N4bp2F8VQG7 1678 aaKnown RBP14.64□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 1810065E05RikQ5NC41 235 aa14.64□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 CrkQ64010 304 aa14.64□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Klhl7Q8BUL5 586 aa14.64□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Yipf1Q91VU1 306 aa14.64□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 1700020D05RikQ99PB1 294 aa14.64□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Chd2E9PZM4 1827 aaKnown RBP14.64□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Zfp408H7BX78 710 aa14.64□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms