RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Foxn3Q499D0 457 aa14.41□□□□□ -0.1
Nup88-203ENSMUST00000108531 Nsrp1Q5NCR9 542 aa14.41□□□□□ -0.1
Nup88-203ENSMUST00000108531 Cdk17Q8K0D0 523 aa14.41□□□□□ -0.1
Nup88-203ENSMUST00000108531 Rab3il1Q8VDV3 383 aa14.41□□□□□ -0.1
Nup88-203ENSMUST00000108531 Lzts2Q91YU6 671 aa14.41□□□□□ -0.1
Nup88-203ENSMUST00000108531 Tor1aip1Q921T2 595 aaKnown RBP14.41□□□□□ -0.1
Nup88-203ENSMUST00000108531 Rhobtb3Q9CTN4 611 aa14.41□□□□□ -0.1
Nup88-203ENSMUST00000108531 Tmem47Q9JJG6 181 aa14.41□□□□□ -0.1
Nup88-203ENSMUST00000108531 Git2Q9JLQ2 708 aa14.41□□□□□ -0.1
Nup88-203ENSMUST00000108531 Sorbs3Q9R1Z8 733 aa14.41□□□□□ -0.1
Nup88-203ENSMUST00000108531 Mtmr9Q9Z2D0 545 aa14.41□□□□□ -0.1
Nup88-203ENSMUST00000108531 Sel1lQ9Z2G6 790 aa14.41□□□□□ -0.1
Nup88-203ENSMUST00000108531 Heg1E9Q7X6 1337 aa14.41□□□□□ -0.1
Nup88-203ENSMUST00000108531 Arid4aF8VPQ2 1261 aaKnown RBP14.4□□□□□ -0.1
Nup88-203ENSMUST00000108531 Nck2O55033 380 aa14.4□□□□□ -0.1
Nup88-203ENSMUST00000108531 Prl2c3P04768 224 aa14.4□□□□□ -0.1
Nup88-203ENSMUST00000108531 Kcna1P16388 495 aa14.4□□□□□ -0.1
Nup88-203ENSMUST00000108531 Rnf40Q3U319 1001 aa14.4□□□□□ -0.1
Nup88-203ENSMUST00000108531 HrQ61645 1182 aa14.4□□□□□ -0.1
Nup88-203ENSMUST00000108531 Pip5kl1Q6U7H8 395 aa14.4□□□□□ -0.1
Nup88-203ENSMUST00000108531 Kif2bQ8C0N1 668 aa14.4□□□□□ -0.1
Nup88-203ENSMUST00000108531 EhhadhQ9DBM2 718 aa14.4□□□□□ -0.1
Nup88-203ENSMUST00000108531 GsdmeQ9Z2D3 512 aa14.4□□□□□ -0.1
Nup88-203ENSMUST00000108531 Gm7347D3YYI9 267 aa14.4□□□□□ -0.1
Nup88-203ENSMUST00000108531 Speer4aF8VPX6 267 aa14.4□□□□□ -0.1
Nup88-203ENSMUST00000108531 Chrna9G3X8Z7 479 aa14.4□□□□□ -0.1
Nup88-203ENSMUST00000108531 Arhgap6O54834 987 aa14.4□□□□□ -0.1
Nup88-203ENSMUST00000108531 RargP18911 458 aaKnown RBP14.4□□□□□ -0.1
Nup88-203ENSMUST00000108531 Exoc8Q6PGF7 716 aa14.4□□□□□ -0.1
Nup88-203ENSMUST00000108531 Gtf3c5Q8R2T8 520 aa14.4□□□□□ -0.1
Nup88-203ENSMUST00000108531 Atp1a1Q8VDN2 1023 aaKnown RBP14.4□□□□□ -0.1
Nup88-203ENSMUST00000108531 Adcy3Q8VHH7 1145 aa14.4□□□□□ -0.1
Nup88-203ENSMUST00000108531 Cmtr1Q9DBC3 837 aa14.4□□□□□ -0.1
Nup88-203ENSMUST00000108531 Arpp21Q9DCB4 807 aa14.4□□□□□ -0.1
Nup88-203ENSMUST00000108531 Ybx3Q9JKB3 361 aaKnown RBP14.4□□□□□ -0.1
Nup88-203ENSMUST00000108531 Klra17Q9JMA4 273 aa14.4□□□□□ -0.1
Nup88-203ENSMUST00000108531 Psma7Q9Z2U0 248 aa14.4□□□□□ -0.1
Nup88-203ENSMUST00000108531 Msh3P13705 1091 aa14.39□□□□□ -0.11
Nup88-203ENSMUST00000108531 Hmgb1P63158 215 aaKnown RBP14.39□□□□□ -0.11
Nup88-203ENSMUST00000108531 Kifap3P70188 793 aa14.39□□□□□ -0.11
Nup88-203ENSMUST00000108531 Acot10Q32MW3 439 aa14.39□□□□□ -0.11
Nup88-203ENSMUST00000108531 Spg7Q3ULF4 781 aa14.39□□□□□ -0.11
Nup88-203ENSMUST00000108531 Jade2Q6ZQF7 829 aa14.39□□□□□ -0.11
Nup88-203ENSMUST00000108531 Bsdc1Q80Y55 427 aa14.39□□□□□ -0.11
Nup88-203ENSMUST00000108531 Lrsam1Q80ZI6 727 aa14.39□□□□□ -0.11
Nup88-203ENSMUST00000108531 Uba5Q8VE47 403 aa14.39□□□□□ -0.11
Nup88-203ENSMUST00000108531 Ribc1Q9D0B8 379 aa14.39□□□□□ -0.11
Nup88-203ENSMUST00000108531 ThegQ9JMB1 375 aa14.39□□□□□ -0.11
Nup88-203ENSMUST00000108531 Fer1l6E0CZ42 1862 aa14.39□□□□□ -0.11
Nup88-203ENSMUST00000108531 Krt18P05784 423 aa14.39□□□□□ -0.11
Nup88-203ENSMUST00000108531 Slc12a2P55012 1205 aa14.39□□□□□ -0.11
Nup88-203ENSMUST00000108531 Vps33bP59016 617 aa14.39□□□□□ -0.11
Nup88-203ENSMUST00000108531 Rpusd2Q149F1 553 aa14.39□□□□□ -0.11
Nup88-203ENSMUST00000108531 Tmed8Q3UHI4 326 aa14.39□□□□□ -0.11
Nup88-203ENSMUST00000108531 Psg29Q3URN6 468 aa14.39□□□□□ -0.11
Nup88-203ENSMUST00000108531 Lrrc43Q3V0L5 667 aa14.39□□□□□ -0.11
Nup88-203ENSMUST00000108531 Arhgef2Q60875 985 aa14.39□□□□□ -0.11
Nup88-203ENSMUST00000108531 Madcam1Q61826 405 aa14.39□□□□□ -0.11
Nup88-203ENSMUST00000108531 Gimap5Q8BWF2 308 aa14.39□□□□□ -0.11
Nup88-203ENSMUST00000108531 Myl6bQ8CI43 207 aa14.39□□□□□ -0.11
Nup88-203ENSMUST00000108531 HyiQ8R1F5 277 aa14.39□□□□□ -0.11
Nup88-203ENSMUST00000108531 UvssaQ9D479 717 aa14.39□□□□□ -0.11
Nup88-203ENSMUST00000108531 Ccdc83Q9D4V3 305 aa14.39□□□□□ -0.11
Nup88-203ENSMUST00000108531 Rpf2Q9JJ80 306 aaKnown RBP14.39□□□□□ -0.11
Nup88-203ENSMUST00000108531 Trp53inp1Q9QXE4 239 aa14.39□□□□□ -0.11
Nup88-203ENSMUST00000108531 Rps6ka4Q9Z2B9 773 aa14.39□□□□□ -0.11
Nup88-203ENSMUST00000108531 Ltn1Q6A009 1767 aa14.38□□□□□ -0.11
Nup88-203ENSMUST00000108531 Pabpc1lA2A5N3 607 aaKnown RBP14.38□□□□□ -0.11
Nup88-203ENSMUST00000108531 Gm1993A6X8I0 212 aa14.38□□□□□ -0.11
Nup88-203ENSMUST00000108531 SlxD3Z347 212 aa14.38□□□□□ -0.11
Nup88-203ENSMUST00000108531 Antxr2Q6DFX2 487 aa14.38□□□□□ -0.11
Nup88-203ENSMUST00000108531 Slc20a2Q80UP8 656 aa14.38□□□□□ -0.11
Nup88-203ENSMUST00000108531 Camsap3Q80VC9 1252 aa14.38□□□□□ -0.11
Nup88-203ENSMUST00000108531 Tldc1Q8K0P3 455 aa14.38□□□□□ -0.11
Nup88-203ENSMUST00000108531 Prpf6Q91YR7 941 aaKnown RBP14.38□□□□□ -0.11
Nup88-203ENSMUST00000108531 Grin3bQ91ZU9 1003 aa14.38□□□□□ -0.11
Nup88-203ENSMUST00000108531 Krtap5-3Q9D226 196 aa14.38□□□□□ -0.11
Nup88-203ENSMUST00000108531 Eef1gQ9D8N0 437 aaKnown RBP14.38□□□□□ -0.11
Nup88-203ENSMUST00000108531 FignQ9ERZ6 759 aa14.38□□□□□ -0.11
Nup88-203ENSMUST00000108531 Myo1cQ9WTI7 1063 aa14.38□□□□□ -0.11
Nup88-203ENSMUST00000108531 Myh8P13542 1937 aa14.38□□□□□ -0.11
Nup88-203ENSMUST00000108531 Ica1lQ3TY65 431 aa14.38□□□□□ -0.11
Nup88-203ENSMUST00000108531 Rhpn1Q61085 643 aa14.38□□□□□ -0.11
Nup88-203ENSMUST00000108531 Mcm7Q61881 719 aaKnown RBP14.38□□□□□ -0.11
Nup88-203ENSMUST00000108531 Asic3Q6X1Y6 530 aa14.38□□□□□ -0.11
Nup88-203ENSMUST00000108531 Sdccag8Q80UF4 717 aa14.38□□□□□ -0.11
Nup88-203ENSMUST00000108531 Pramel6Q810Y9 485 aa14.38□□□□□ -0.11
Nup88-203ENSMUST00000108531 Tmem179Q8BHH9 233 aa14.38□□□□□ -0.11
Nup88-203ENSMUST00000108531 Znf526Q8BI66 675 aa14.38□□□□□ -0.11
Nup88-203ENSMUST00000108531 Serpinb12Q9D7P9 423 aa14.38□□□□□ -0.11
Nup88-203ENSMUST00000108531 Lamb1P02469 1786 aa14.38□□□□□ -0.11
Nup88-203ENSMUST00000108531 Hnrnph3D3Z3N4 346 aaKnown RBP14.37□□□□□ -0.11
Nup88-203ENSMUST00000108531 Gna11P21278 359 aa14.37□□□□□ -0.11
Nup88-203ENSMUST00000108531 Eif3j1Q3UGC7 261 aaKnown RBP14.37□□□□□ -0.11
Nup88-203ENSMUST00000108531 Eif3j2Q66JS6 263 aa14.37□□□□□ -0.11
Nup88-203ENSMUST00000108531 Mettl25Q6NXH8 597 aa14.37□□□□□ -0.11
Nup88-203ENSMUST00000108531 GlyctkQ8QZY2 523 aa14.37□□□□□ -0.11
Nup88-203ENSMUST00000108531 Tfap4Q9JIZ5 338 aa14.37□□□□□ -0.11
Nup88-203ENSMUST00000108531 Tacc2Q9JJG0 1149 aa14.37□□□□□ -0.11
Nup88-203ENSMUST00000108531 Homer1Q9Z2Y3 366 aa14.37□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 104.8 ms