RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W UBC8P28263 218 aa3.79□□□□□ -1.8
ECM16YMR128W AEP1P32493 518 aa3.79□□□□□ -1.8
ECM16YMR128W MRPL7P36519 292 aa3.79□□□□□ -1.8
ECM16YMR128W HSL7P38274 827 aa3.79□□□□□ -1.8
ECM16YMR128W GIP4P39732 760 aa3.79□□□□□ -1.8
ECM16YMR128W YAT2P40017 923 aa3.79□□□□□ -1.8
ECM16YMR128W ARB1P40024 610 aaKnown RBP3.79□□□□□ -1.8
ECM16YMR128W TIM54P47045 478 aa3.79□□□□□ -1.8
ECM16YMR128W YJR154WP47181 346 aa3.79□□□□□ -1.8
ECM16YMR128W RKM2Q03942 479 aa3.79□□□□□ -1.8
ECM16YMR128W GUD1Q07729 489 aa3.79□□□□□ -1.8
ECM16YMR128W SUC2P00724 532 aa3.78□□□□□ -1.8
ECM16YMR128W GCY1P14065 312 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
ECM16YMR128W CCA1P21269 546 aa3.78□□□□□ -1.8
ECM16YMR128W YJR061WP40355 935 aa3.78□□□□□ -1.8
ECM16YMR128W YIR007WP40566 764 aa3.78□□□□□ -1.8
ECM16YMR128W RLP7P40693 322 aaKnown RBP3.78□□□□□ -1.8
ECM16YMR128W RTT101P47050 842 aa3.78□□□□□ -1.8
ECM16YMR128W MND1P53102 219 aa3.78□□□□□ -1.8
ECM16YMR128W CUL3P53202 744 aa3.78□□□□□ -1.8
ECM16YMR128W YNR063WP53749 607 aa3.78□□□□□ -1.8
ECM16YMR128W YNL018CP53976 612 aa3.78□□□□□ -1.8
ECM16YMR128W CDC123Q05791 360 aa3.78□□□□□ -1.8
ECM16YMR128W ECM38Q05902 660 aaPredicted RBP3.78□□□□□ -1.8
ECM16YMR128W YPR027CQ12079 277 aa3.78□□□□□ -1.8
ECM16YMR128W TRP3P00937 484 aa3.78□□□□□ -1.8
ECM16YMR128W RAP1P11938 827 aa3.78□□□□□ -1.8
ECM16YMR128W SAT4P25333 603 aaKnown RBP3.78□□□□□ -1.8
ECM16YMR128W HRR25P29295 494 aaKnown RBP3.78□□□□□ -1.8
ECM16YMR128W NUP2P32499 720 aa3.78□□□□□ -1.8
ECM16YMR128W PPG1P32838 368 aa3.78□□□□□ -1.8
ECM16YMR128W NTR2P36118 322 aaPredicted RBP3.78□□□□□ -1.8
ECM16YMR128W ETP1P38748 585 aaKnown RBP3.78□□□□□ -1.8
ECM16YMR128W BZZ1P38822 633 aa3.78□□□□□ -1.8
ECM16YMR128W YJL070CP40361 888 aa3.78□□□□□ -1.8
ECM16YMR128W NIT1P40447 199 aa3.78□□□□□ -1.8
ECM16YMR128W GPP1P41277 250 aaKnown RBP3.78□□□□□ -1.8
ECM16YMR128W SPO74P45819 413 aa3.78□□□□□ -1.8
ECM16YMR128W ARC1P46672 376 aaKnown RBP3.78□□□□□ -1.8
ECM16YMR128W MEH1Q02205 184 aa3.78□□□□□ -1.8
ECM16YMR128W GRX5Q02784 150 aa3.78□□□□□ -1.8
ECM16YMR128W FMP30Q02883 468 aa3.78□□□□□ -1.8
ECM16YMR128W GAS3Q03655 524 aa3.78□□□□□ -1.8
ECM16YMR128W HSP31Q04432 237 aa3.78□□□□□ -1.8
ECM16YMR128W THI21Q08975 551 aa3.78□□□□□ -1.8
ECM16YMR128W OSW2Q12202 724 aa3.78□□□□□ -1.8
ECM16YMR128W VPS13Q07878 3144 aa3.78□□□□□ -1.8
ECM16YMR128W TIM9O74700 87 aa3.78□□□□□ -1.8
ECM16YMR128W MET16P18408 261 aaPredicted RBP3.78□□□□□ -1.8
ECM16YMR128W TKL1P23254 680 aaKnown RBP3.78□□□□□ -1.8
ECM16YMR128W YKL222CP35995 705 aa3.78□□□□□ -1.8
ECM16YMR128W TVP38P36164 337 aa3.78□□□□□ -1.8
ECM16YMR128W SKG1P36169 355 aa3.78□□□□□ -1.8
ECM16YMR128W BAP2P38084 609 aa3.78□□□□□ -1.8
ECM16YMR128W GOS1P38736 223 aa3.78□□□□□ -1.8
ECM16YMR128W YHR131CP38835 850 aa3.78□□□□□ -1.8
ECM16YMR128W FAA2P39518 744 aa3.78□□□□□ -1.8
ECM16YMR128W UTP18P40362 594 aaPredicted RBP3.78□□□□□ -1.8
ECM16YMR128W AGP3P43548 558 aa3.78□□□□□ -1.8
ECM16YMR128W PTR3P43606 678 aa3.78□□□□□ -1.8
ECM16YMR128W YGL176CP46945 554 aa3.78□□□□□ -1.8
ECM16YMR128W TRF5P48561 642 aaKnown RBP3.78□□□□□ -1.8
ECM16YMR128W YPR003CP53394 754 aa3.78□□□□□ -1.8
ECM16YMR128W ADE12P80210 433 aaKnown RBP3.78□□□□□ -1.8
ECM16YMR128W SLD5Q03406 294 aa3.78□□□□□ -1.8
ECM16YMR128W RSN1Q03516 953 aa3.78□□□□□ -1.8
ECM16YMR128W ECM30Q06673 1274 aa3.78□□□□□ -1.8
ECM16YMR128W MUM3Q08750 479 aa3.78□□□□□ -1.8
ECM16YMR128W ULA1Q12059 462 aa3.78□□□□□ -1.8
ECM16YMR128W ARN1P38731 627 aa3.77□□□□□ -1.81
ECM16YMR128W AIM18P38884 321 aa3.77□□□□□ -1.81
ECM16YMR128W MSS2P40990 351 aa3.77□□□□□ -1.81
ECM16YMR128W GYP8P43570 497 aa3.77□□□□□ -1.81
ECM16YMR128W SCD6P45978 349 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81 RIP-Chip
ECM16YMR128W AZR1P50080 613 aa3.77□□□□□ -1.81
ECM16YMR128W ALT1P52893 592 aa3.77□□□□□ -1.81
ECM16YMR128W GND2P53319 492 aa3.77□□□□□ -1.81
ECM16YMR128W YNL010WP53981 241 aaKnown RBP3.77□□□□□ -1.81
ECM16YMR128W SPR6Q01684 191 aa3.77□□□□□ -1.81
ECM16YMR128W ECM9Q02202 377 aa3.77□□□□□ -1.81
ECM16YMR128W TAF11Q04226 346 aa3.77□□□□□ -1.81
ECM16YMR128W YMR226CQ05016 267 aaKnown RBP3.77□□□□□ -1.81
ECM16YMR128W YDL114WQ07530 308 aa3.77□□□□□ -1.81
ECM16YMR128W RSB1Q08417 382 aa3.77□□□□□ -1.81
ECM16YMR128W HUA2Q12134 243 aa3.77□□□□□ -1.81
ECM16YMR128W UPC2Q12151 913 aa3.77□□□□□ -1.81
ECM16YMR128W PCD1Q12524 340 aa3.77□□□□□ -1.81
ECM16YMR128W YKL018C-AQ3E7A7 99 aa3.77□□□□□ -1.81
ECM16YMR128W ARG81P05085 880 aa3.77□□□□□ -1.81
ECM16YMR128W INO1P11986 533 aa3.77□□□□□ -1.81
ECM16YMR128W GCN3P14741 305 aa3.77□□□□□ -1.81
ECM16YMR128W YCK2P23292 546 aaKnown RBP3.77□□□□□ -1.81
ECM16YMR128W SRP101P32916 621 aa3.77□□□□□ -1.81
ECM16YMR128W CRP1P38845 465 aaKnown RBP3.77□□□□□ -1.81
ECM16YMR128W ELP2P42935 788 aa3.77□□□□□ -1.81
ECM16YMR128W IRC5P43610 853 aa3.77□□□□□ -1.81
ECM16YMR128W VPS9P54787 451 aa3.77□□□□□ -1.81
ECM16YMR128W ERB1Q04660 807 aaKnown RBP3.77□□□□□ -1.81
ECM16YMR128W ARR2Q06597 130 aa3.77□□□□□ -1.81
ECM16YMR128W TPO1Q07824 586 aa3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms