RNA–Protein interactions for RNA: YLR410W

VIP1, Transcript of Inositol hexakisphosphate and inositol heptakisphosphate kinase, yeast

Gene VIP1, Length 3,441 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VIP1	YLR410W	RTC1	Q08281	1341 aa		3.4	□□□□□ -1.87
VIP1	YLR410W	HXK2	P04807	486 aa	Known RBP	3.4	□□□□□ -1.87
VIP1	YLR410W	LAC1	P28496	418 aa		3.4	□□□□□ -1.87
VIP1	YLR410W	SOF1	P33750	489 aa	Known RBP	3.4	□□□□□ -1.87
VIP1	YLR410W	CUE3	P53137	624 aa	Known RBP	3.4	□□□□□ -1.87
VIP1	YLR410W	GTB1	Q04924	702 aa		3.4	□□□□□ -1.87
VIP1	YLR410W	GCN2	P15442	1659 aa		3.4	□□□□□ -1.87
VIP1	YLR410W	ILV2	P07342	687 aa	Known RBP	3.4	□□□□□ -1.87
VIP1	YLR410W	PPS1	P38148	807 aa		3.4	□□□□□ -1.87
VIP1	YLR410W	SEC31	P38968	1273 aa	Known RBP	3.4	□□□□□ -1.87
VIP1	YLR410W	GIP4	P39732	760 aa		3.4	□□□□□ -1.87
VIP1	YLR410W	DLD2	P46681	530 aa	Known RBP	3.4	□□□□□ -1.87
VIP1	YLR410W	PSY3	Q12318	242 aa		3.4	□□□□□ -1.87
VIP1	YLR410W	IMG1	P25626	169 aa		3.39	□□□□□ -1.87
VIP1	YLR410W	CNE1	P27825	502 aa		3.39	□□□□□ -1.87
VIP1	YLR410W	SYN8	P31377	255 aa		3.39	□□□□□ -1.87
VIP1	YLR410W	PUP2	P32379	260 aa		3.39	□□□□□ -1.87
VIP1	YLR410W	GSH1	P32477	678 aa		3.39	□□□□□ -1.87
VIP1	YLR410W	WBP1	P33767	430 aa	Known RBP	3.39	□□□□□ -1.87
VIP1	YLR410W	TOD6	P34219	525 aa		3.39	□□□□□ -1.87
VIP1	YLR410W	LST4	P34239	828 aa		3.39	□□□□□ -1.87
VIP1	YLR410W	PFF1	P38244	976 aa		3.39	□□□□□ -1.87
VIP1	YLR410W	YSW1	P38280	609 aa		3.39	□□□□□ -1.87
VIP1	YLR410W	ICS2	P38284	255 aa		3.39	□□□□□ -1.87
VIP1	YLR410W	ANS1	P38832	159 aa		3.39	□□□□□ -1.87
VIP1	YLR410W	SER3	P40054	469 aa		3.39	□□□□□ -1.87
VIP1	YLR410W	YNL092W	P53934	400 aa		3.39	□□□□□ -1.87
VIP1	YLR410W	ARO10	Q06408	635 aa		3.39	□□□□□ -1.87
VIP1	YLR410W	YDR061W	Q12298	539 aa		3.39	□□□□□ -1.87
VIP1	YLR410W	VMA2	P16140	517 aa	Known RBP	3.39	□□□□□ -1.87
VIP1	YLR410W	URA4	P20051	364 aa		3.39	□□□□□ -1.87
VIP1	YLR410W	ADH7	P25377	361 aa		3.39	□□□□□ -1.87
VIP1	YLR410W	IDH2	P28241	369 aa	Known RBP	3.39	□□□□□ -1.87
VIP1	YLR410W	GYP6	P32806	458 aa		3.39	□□□□□ -1.87
VIP1	YLR410W	HCS1	P34243	683 aa		3.39	□□□□□ -1.87
VIP1	YLR410W	VPS9	P54787	451 aa		3.39	□□□□□ -1.87
VIP1	YLR410W	YDL242W	Q07746	117 aa		3.39	□□□□□ -1.87
VIP1	YLR410W	YOR389W	Q08912	624 aa		3.39	□□□□□ -1.87
VIP1	YLR410W	YMR084W	A2P2R3	262 aa		3.38	□□□□□ -1.87
VIP1	YLR410W	GRR1	P24814	1151 aa		3.38	□□□□□ -1.87
VIP1	YLR410W	RRP43	P25359	394 aa	Predicted RBP	3.38	□□□□□ -1.87
VIP1	YLR410W	YIM1	P28625	365 aa		3.38	□□□□□ -1.87
VIP1	YLR410W	MRPL9	P31334	269 aa		3.38	□□□□□ -1.87
VIP1	YLR410W	YME2	P32843	850 aa		3.38	□□□□□ -1.87
VIP1	YLR410W	RIB7	P33312	244 aa		3.38	□□□□□ -1.87
VIP1	YLR410W	RPF2	P36160	344 aa	Known RBP	3.38	□□□□□ -1.87
VIP1	YLR410W	SNF12	P53628	566 aa		3.38	□□□□□ -1.87
VIP1	YLR410W	PPM1	Q04081	328 aa		3.38	□□□□□ -1.87
VIP1	YLR410W	YDL073W	Q07454	984 aa		3.38	□□□□□ -1.87
VIP1	YLR410W	YBR255C-A	Q3E776	120 aa		3.38	□□□□□ -1.87
VIP1	YLR410W	PDR15	Q04182	1529 aa	Known RBP	3.38	□□□□□ -1.87
VIP1	YLR410W	YLR278C	Q05854	1341 aa		3.38	□□□□□ -1.87
VIP1	YLR410W	DAP2	P18962	818 aa		3.38	□□□□□ -1.87
VIP1	YLR410W	RNR3	P21672	869 aa	Known RBP	3.38	□□□□□ -1.87
VIP1	YLR410W	SLM4	P38247	162 aa		3.38	□□□□□ -1.87
VIP1	YLR410W	RTT105	P40063	208 aa		3.38	□□□□□ -1.87
VIP1	YLR410W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	3.38	□□□□□ -1.87	not detected
VIP1	YLR410W	PHO23	P50947	330 aa		3.38	□□□□□ -1.87
VIP1	YLR410W	RRP46	P53256	223 aa	Predicted RBP	3.38	□□□□□ -1.87
VIP1	YLR410W	KAP120	Q02932	1032 aa		3.38	□□□□□ -1.87
VIP1	YLR410W	COQ9	Q05779	260 aa		3.38	□□□□□ -1.87
VIP1	YLR410W	IKI3	Q06706	1349 aa	Known RBP	3.38	□□□□□ -1.87
VIP1	YLR410W	RPL1A	P0CX43	217 aa	Known RBP	3.38	□□□□□ -1.87
VIP1	YLR410W	RPL1B	P0CX44	217 aa	Known RBP	3.38	□□□□□ -1.87
VIP1	YLR410W	IMD2	P38697	523 aa	Known RBP	3.38	□□□□□ -1.87
VIP1	YLR410W	PCL5	P38794	229 aa		3.38	□□□□□ -1.87
VIP1	YLR410W	YGL138C	P53122	345 aa		3.38	□□□□□ -1.87
VIP1	YLR410W	YNL144C	P53907	740 aa		3.38	□□□□□ -1.87
VIP1	YLR410W	YVH1	Q02256	364 aa	Known RBP	3.38	□□□□□ -1.87
VIP1	YLR410W	YDR132C	Q03900	495 aa		3.38	□□□□□ -1.87
VIP1	YLR410W	ECM30	Q06673	1274 aa		3.38	□□□□□ -1.87
VIP1	YLR410W	YDL057W	Q07379	328 aa		3.38	□□□□□ -1.87
VIP1	YLR410W	TEN1	Q07921	160 aa		3.38	□□□□□ -1.87
VIP1	YLR410W	MDM20	Q12387	796 aa	Known RBP	3.38	□□□□□ -1.87
VIP1	YLR410W	HAP1	P0CE41	1502 aa		3.37	□□□□□ -1.87
VIP1	YLR410W	PDE2	P06776	526 aa		3.37	□□□□□ -1.87
VIP1	YLR410W	PET111	P08468	800 aa		3.37	□□□□□ -1.87
VIP1	YLR410W	STE4	P18851	423 aa		3.37	□□□□□ -1.87
VIP1	YLR410W	GAS1	P22146	559 aa	Known RBP	3.37	□□□□□ -1.87
VIP1	YLR410W	EPL1	P43572	832 aa		3.37	□□□□□ -1.87
VIP1	YLR410W	COG2	P53271	262 aa		3.37	□□□□□ -1.87
VIP1	YLR410W	KTR5	P53966	522 aa	Predicted RBP	3.37	□□□□□ -1.87
VIP1	YLR410W	DON1	Q05610	365 aa		3.37	□□□□□ -1.87
VIP1	YLR410W	DBP9	Q06218	594 aa	Known RBP	3.37	□□□□□ -1.87
VIP1	YLR410W	PCL8	Q08966	492 aa		3.37	□□□□□ -1.87
VIP1	YLR410W	GEA2	P39993	1459 aa	Known RBP	3.37	□□□□□ -1.87
VIP1	YLR410W	ALG7	P07286	448 aa		3.37	□□□□□ -1.87
VIP1	YLR410W	BUD14	P27637	709 aa		3.37	□□□□□ -1.87
VIP1	YLR410W	SSE2	P32590	693 aa	Known RBP	3.37	□□□□□ -1.87
VIP1	YLR410W	YBR144C	P34215	104 aa		3.37	□□□□□ -1.87
VIP1	YLR410W	YTA12	P40341	825 aa		3.37	□□□□□ -1.87
VIP1	YLR410W	YIL089W	P40500	205 aa		3.37	□□□□□ -1.87
VIP1	YLR410W	OCA2	P53949	197 aa		3.37	□□□□□ -1.87
VIP1	YLR410W	SOV1	Q04748	898 aa		3.37	□□□□□ -1.87
VIP1	YLR410W	MRI1	Q06489	411 aa	Known RBP	3.37	□□□□□ -1.87
VIP1	YLR410W	TGS1	Q12052	315 aa		3.37	□□□□□ -1.87
VIP1	YLR410W	AHA1	Q12449	350 aa	Known RBP	3.37	□□□□□ -1.87
VIP1	YLR410W	PAN1	P32521	1480 aa		3.37	□□□□□ -1.87
VIP1	YLR410W	TRP4	P07285	380 aa	Predicted RBP	3.37	□□□□□ -1.87
VIP1	YLR410W	RML2	P32611	393 aa		3.37	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms