RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C YPT52P36018 234 aaKnown RBP10.27□□□□□ -0.77
SHM2YLR058C RIM11P38615 370 aa10.27□□□□□ -0.77
SHM2YLR058C BZZ1P38822 633 aa10.27□□□□□ -0.77
SHM2YLR058C LSM5P40089 93 aaKnown RBP10.27□□□□□ -0.77
SHM2YLR058C UTP18P40362 594 aaPredicted RBP10.27□□□□□ -0.77
SHM2YLR058C HST3P53687 447 aa10.27□□□□□ -0.77
SHM2YLR058C CDC21P06785 304 aa10.26□□□□□ -0.77
SHM2YLR058C SWI5P08153 709 aa10.26□□□□□ -0.77
SHM2YLR058C SPT15P13393 240 aaKnown RBP10.26□□□□□ -0.77
SHM2YLR058C GUK1P15454 187 aaKnown RBP10.26□□□□□ -0.77
SHM2YLR058C EXO70P19658 623 aa10.26□□□□□ -0.77
SHM2YLR058C YSR3P23501 404 aa10.26□□□□□ -0.77
SHM2YLR058C RFC3P38629 340 aa10.26□□□□□ -0.77
SHM2YLR058C CCT6P39079 546 aa10.26□□□□□ -0.77
SHM2YLR058C NPT1P39683 429 aaKnown RBP10.26□□□□□ -0.77
SHM2YLR058C GIP4P39732 760 aa10.26□□□□□ -0.77
SHM2YLR058C SHY1P53266 389 aa10.26□□□□□ -0.77
SHM2YLR058C GAS3Q03655 524 aa10.26□□□□□ -0.77
SHM2YLR058C FMN1Q03778 218 aa10.26□□□□□ -0.77
SHM2YLR058C VPS68Q12016 184 aa10.26□□□□□ -0.77
SHM2YLR058C PST1Q12355 444 aa10.26□□□□□ -0.77
SHM2YLR058C AHA1Q12449 350 aaKnown RBP10.26□□□□□ -0.77
SHM2YLR058C FUM1P08417 488 aaKnown RBP10.25□□□□□ -0.77
SHM2YLR058C TUB1P09733 447 aaKnown RBP10.25□□□□□ -0.77
SHM2YLR058C CIN8P27895 1000 aa10.25□□□□□ -0.77
SHM2YLR058C ATP11P32453 318 aa10.25□□□□□ -0.77
SHM2YLR058C SLX5P32828 619 aaKnown RBP10.25□□□□□ -0.77
SHM2YLR058C RPF2P36160 344 aaKnown RBP10.25□□□□□ -0.77
SHM2YLR058C UTP9P38882 575 aaKnown RBP10.25□□□□□ -0.77
SHM2YLR058C BAT1P38891 393 aaKnown RBP10.25□□□□□ -0.77
SHM2YLR058C YJL070CP40361 888 aa10.25□□□□□ -0.77
SHM2YLR058C STB2P46679 850 aa10.25□□□□□ -0.77
SHM2YLR058C YJR154WP47181 346 aa10.25□□□□□ -0.77
SHM2YLR058C GTR2P53290 341 aa10.25□□□□□ -0.77
SHM2YLR058C YPL113CQ02961 396 aa10.25□□□□□ -0.77
SHM2YLR058C YMR102CQ03177 834 aa10.25□□□□□ -0.77
SHM2YLR058C HEL2Q05580 639 aaKnown RBP10.25□□□□□ -0.77
SHM2YLR058C MCD1Q12158 566 aa10.25□□□□□ -0.77
SHM2YLR058C MET8P15807 274 aa10.24□□□□□ -0.77
SHM2YLR058C ARG1P22768 420 aa10.24□□□□□ -0.77
SHM2YLR058C MVD1P32377 396 aaKnown RBP10.24□□□□□ -0.77
SHM2YLR058C YEL073CP39974 107 aa10.24□□□□□ -0.77
SHM2YLR058C ZRG17P53735 605 aa10.24□□□□□ -0.77
SHM2YLR058C YML131WQ03102 365 aa10.24□□□□□ -0.77
SHM2YLR058C BCH1Q05029 724 aa10.24□□□□□ -0.77
SHM2YLR058C MLS1P30952 554 aa10.24□□□□□ -0.77
SHM2YLR058C SIP2P34164 415 aaKnown RBP10.24□□□□□ -0.77
SHM2YLR058C YKL100CP34248 587 aa10.24□□□□□ -0.77
SHM2YLR058C SRX1P36077 127 aa10.24□□□□□ -0.77
SHM2YLR058C WSC4P38739 605 aa10.24□□□□□ -0.77
SHM2YLR058C BIR1P47134 954 aa10.24□□□□□ -0.77
SHM2YLR058C NOP19P53317 196 aaPredicted RBP10.24□□□□□ -0.77
SHM2YLR058C CUS2P53830 285 aaPredicted RBP10.24□□□□□ -0.77
SHM2YLR058C UBP2Q01476 1272 aa10.24□□□□□ -0.77
SHM2YLR058C GRS2Q06817 618 aa10.24□□□□□ -0.77
SHM2YLR058C GPB1Q08886 897 aa10.24□□□□□ -0.77
SHM2YLR058C MSB2P32334 1306 aa10.23□□□□□ -0.77
SHM2YLR058C RSR1P13856 272 aa10.23□□□□□ -0.77
SHM2YLR058C YCK2P23292 546 aaKnown RBP10.23□□□□□ -0.77
SHM2YLR058C TOA1P32773 286 aa10.23□□□□□ -0.77
SHM2YLR058C SDH3P33421 198 aa10.23□□□□□ -0.77
SHM2YLR058C SOL2P37262 315 aa10.23□□□□□ -0.77
SHM2YLR058C RRP3P38712 501 aaKnown RBP10.23□□□□□ -0.77
SHM2YLR058C UBA4P38820 440 aa10.23□□□□□ -0.77
SHM2YLR058C SPF1P39986 1215 aaKnown RBP10.23□□□□□ -0.77
SHM2YLR058C SCS2P40075 244 aaKnown RBP10.23□□□□□ -0.77
SHM2YLR058C TIF34P40217 347 aaKnown RBP10.23□□□□□ -0.77
SHM2YLR058C TMA22P47089 198 aaPredicted RBP10.23□□□□□ -0.77
SHM2YLR058C ECM9Q02202 377 aa10.23□□□□□ -0.77
SHM2YLR058C GLO2Q05584 274 aa10.23□□□□□ -0.77
SHM2YLR058C JIP5Q06214 492 aaPredicted RBP10.23□□□□□ -0.77
SHM2YLR058C YLL032CQ07834 825 aaKnown RBP RIP-Chip data10.23□□□□□ -0.77not detected
SHM2YLR058C YLR049CQ12110 428 aa10.23□□□□□ -0.77
SHM2YLR058C CAR1P00812 333 aaKnown RBP10.22□□□□□ -0.77
SHM2YLR058C SPT3P06844 337 aa10.22□□□□□ -0.77
SHM2YLR058C CLB1P24868 471 aa10.22□□□□□ -0.77
SHM2YLR058C BUB2P26448 306 aaPredicted RBP10.22□□□□□ -0.77
SHM2YLR058C PFS1P38872 237 aa10.22□□□□□ -0.77
SHM2YLR058C YER034WP40022 185 aaKnown RBP10.22□□□□□ -0.77
SHM2YLR058C EMP65P40085 556 aa10.22□□□□□ -0.77
SHM2YLR058C YNL010WP53981 241 aaKnown RBP10.22□□□□□ -0.77
SHM2YLR058C REX2P54964 269 aaKnown RBP10.22□□□□□ -0.77
SHM2YLR058C AAT1Q01802 451 aa10.22□□□□□ -0.77
SHM2YLR058C LGE1Q02796 332 aaKnown RBP10.22□□□□□ -0.77
SHM2YLR058C YML053CQ04978 212 aa10.22□□□□□ -0.77
SHM2YLR058C FAR10Q06001 478 aa10.22□□□□□ -0.77
SHM2YLR058C PLB3Q08108 686 aa10.22□□□□□ -0.77
SHM2YLR058C ESA1Q08649 445 aa10.22□□□□□ -0.77
SHM2YLR058C TRP3P00937 484 aa10.21□□□□□ -0.78
SHM2YLR058C CLN2P20438 545 aa10.21□□□□□ -0.78
SHM2YLR058C RAD14P28519 371 aa10.21□□□□□ -0.78
SHM2YLR058C CRM1P30822 1084 aaKnown RBP10.21□□□□□ -0.78
SHM2YLR058C SPR1P32603 445 aa10.21□□□□□ -0.78
SHM2YLR058C RPS1AP33442 255 aaKnown RBP10.21□□□□□ -0.78
SHM2YLR058C GIM4P40005 111 aaKnown RBP10.21□□□□□ -0.78
SHM2YLR058C MET18P40469 1032 aa10.21□□□□□ -0.78
SHM2YLR058C FKH2P41813 862 aa10.21□□□□□ -0.78
SHM2YLR058C PFA3P42836 336 aa10.21□□□□□ -0.78
SHM2YLR058C MPS2P53159 387 aa10.21□□□□□ -0.78
SHM2YLR058C YGR015CP53208 328 aa10.21□□□□□ -0.78
Retrieved 100 of 5,963 RNA–protein pairs in 177.1 ms