RNA–Protein interactions for RNA: YHR009C

TDA3, Transcript of Putative oxidoreductase involved in late endosome to Golgi transport, yeast

Gene TDA3, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TDA3	YHR009C	YEL020C	P39994	560 aa		4.19	□□□□□ -1.74
TDA3	YHR009C	LCB2	P40970	561 aa		4.19	□□□□□ -1.74
TDA3	YHR009C	VMA13	P41807	478 aa	Known RBP	4.19	□□□□□ -1.74
TDA3	YHR009C	STB2	P46679	850 aa		4.19	□□□□□ -1.74
TDA3	YHR009C	TCB2	P48231	1178 aa		4.19	□□□□□ -1.74
TDA3	YHR009C	CTF4	Q01454	927 aa		4.19	□□□□□ -1.74
TDA3	YHR009C	PFA5	Q03289	374 aa		4.19	□□□□□ -1.74
TDA3	YHR009C	YLR455W	Q06188	304 aa		4.19	□□□□□ -1.74
TDA3	YHR009C	VTA1	Q06263	330 aa		4.19	□□□□□ -1.74
TDA3	YHR009C	IRC3	Q06683	689 aa		4.19	□□□□□ -1.74
TDA3	YHR009C	APL4	Q12028	832 aa		4.19	□□□□□ -1.74
TDA3	YHR009C	SPT7	P35177	1332 aa		4.19	□□□□□ -1.74
TDA3	YHR009C	RPN13	O13563	156 aa		4.19	□□□□□ -1.74
TDA3	YHR009C	BI2	P03873	423 aa		4.19	□□□□□ -1.74
TDA3	YHR009C	ADE5,7	P07244	802 aa	Known RBP	4.19	□□□□□ -1.74
TDA3	YHR009C	RAP1	P11938	827 aa		4.19	□□□□□ -1.74
TDA3	YHR009C	RPL3	P14126	387 aa	Known RBP	4.19	□□□□□ -1.74
TDA3	YHR009C	CLC1	P17891	233 aa		4.19	□□□□□ -1.74
TDA3	YHR009C	TKL1	P23254	680 aa	Known RBP	4.19	□□□□□ -1.74
TDA3	YHR009C	CPR2	P23285	205 aa		4.19	□□□□□ -1.74
TDA3	YHR009C	SNT1	P25357	1226 aa		4.19	□□□□□ -1.74
TDA3	YHR009C	HXT3	P32466	567 aa	Known RBP	4.19	□□□□□ -1.74
TDA3	YHR009C	YME1	P32795	747 aa		4.19	□□□□□ -1.74
TDA3	YHR009C	FTH1	P38310	465 aa		4.19	□□□□□ -1.74
TDA3	YHR009C	IMD2	P38697	523 aa	Known RBP	4.19	□□□□□ -1.74
TDA3	YHR009C	MSR1	P38714	643 aa		4.19	□□□□□ -1.74
TDA3	YHR009C	GDI1	P39958	451 aa	Known RBP	4.19	□□□□□ -1.74
TDA3	YHR009C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
TDA3	YHR009C	IMD3	P50095	523 aa	Known RBP	4.19	□□□□□ -1.74
TDA3	YHR009C	MRK1	P50873	501 aa		4.19	□□□□□ -1.74
TDA3	YHR009C	ERG26	P53199	349 aa	Known RBP	4.19	□□□□□ -1.74
TDA3	YHR009C	YMR178W	Q03219	274 aa	Known RBP	4.19	□□□□□ -1.74
TDA3	YHR009C	GYL1	Q04322	720 aa		4.19	□□□□□ -1.74
TDA3	YHR009C	SOV1	Q04748	898 aa		4.19	□□□□□ -1.74
TDA3	YHR009C	ETT1	Q08421	412 aa	Known RBP	4.19	□□□□□ -1.74
TDA3	YHR009C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
TDA3	YHR009C	YDL007C-A	Q2V2Q0	85 aa		4.19	□□□□□ -1.74
TDA3	YHR009C	YML133C	Q03099	1374 aa		4.18	□□□□□ -1.74
TDA3	YHR009C	YLL067C	Q07888	1374 aa		4.18	□□□□□ -1.74
TDA3	YHR009C	YLL066C	Q99208	1374 aa		4.18	□□□□□ -1.74
TDA3	YHR009C	YER145C-A	A0A023PYF4	145 aa		4.18	□□□□□ -1.74
TDA3	YHR009C	TPM1	P17536	199 aa	Known RBP	4.18	□□□□□ -1.74
TDA3	YHR009C	ELO2	P25358	347 aa		4.18	□□□□□ -1.74
TDA3	YHR009C	ANP1	P32629	500 aa		4.18	□□□□□ -1.74
TDA3	YHR009C	KAP120	Q02932	1032 aa		4.18	□□□□□ -1.74
TDA3	YHR009C	MSC1	Q03104	513 aa		4.18	□□□□□ -1.74
TDA3	YHR009C	PDS5	Q04264	1277 aa		4.18	□□□□□ -1.74
TDA3	YHR009C	EMI2	Q04409	500 aa	Known RBP	4.18	□□□□□ -1.74
TDA3	YHR009C	YLR049C	Q12110	428 aa		4.18	□□□□□ -1.74
TDA3	YHR009C	RDL1	Q12305	139 aa	Known RBP	4.18	□□□□□ -1.74
TDA3	YHR009C	BUD5	P25300	642 aa	Predicted RBP	4.17	□□□□□ -1.74
TDA3	YHR009C	YCR006C	P25350	157 aa		4.17	□□□□□ -1.74
TDA3	YHR009C	RRP7	P25368	297 aa	Predicted RBP	4.17	□□□□□ -1.74
TDA3	YHR009C	SAC1	P32368	623 aa	Known RBP	4.17	□□□□□ -1.74
TDA3	YHR009C	TFB1	P32776	642 aa		4.17	□□□□□ -1.74
TDA3	YHR009C	RPL32	P38061	130 aa	Known RBP	4.17	□□□□□ -1.74
TDA3	YHR009C	DBP8	P38719	431 aa		4.17	□□□□□ -1.74
TDA3	YHR009C	ANS1	P38832	159 aa		4.17	□□□□□ -1.74
TDA3	YHR009C	SEC28	P40509	296 aa	Known RBP	4.17	□□□□□ -1.74
TDA3	YHR009C	CIN1	P40987	1014 aa		4.17	□□□□□ -1.74
TDA3	YHR009C	YFR016C	P43597	1233 aa	Known RBP	4.17	□□□□□ -1.74
TDA3	YHR009C	RPS0B	P46654	252 aa	Known RBP	4.17	□□□□□ -1.74
TDA3	YHR009C	MNP1	P53163	194 aa	Predicted RBP	4.17	□□□□□ -1.74
TDA3	YHR009C	TAP42	Q04372	366 aa		4.17	□□□□□ -1.74
TDA3	YHR009C	COQ9	Q05779	260 aa		4.17	□□□□□ -1.74
TDA3	YHR009C	RPS10A	Q08745	105 aa	Predicted RBP	4.17	□□□□□ -1.74
TDA3	YHR009C	GPM3	Q12326	303 aa		4.17	□□□□□ -1.74
TDA3	YHR009C	GPA1	P08539	472 aa		4.16	□□□□□ -1.74
TDA3	YHR009C	MSS51	P32335	436 aa		4.16	□□□□□ -1.74
TDA3	YHR009C	RML2	P32611	393 aa		4.16	□□□□□ -1.74
TDA3	YHR009C	HCS1	P34243	683 aa		4.16	□□□□□ -1.74
TDA3	YHR009C	YKL100C	P34248	587 aa		4.16	□□□□□ -1.74
TDA3	YHR009C	PXL1	P36166	706 aa		4.16	□□□□□ -1.74
TDA3	YHR009C	CIN4	P39110	191 aa		4.16	□□□□□ -1.74
TDA3	YHR009C	PAC2	P39937	518 aa		4.16	□□□□□ -1.74
TDA3	YHR009C	CAK1	P43568	368 aa	Predicted RBP	4.16	□□□□□ -1.74
TDA3	YHR009C	RPS10B	P46784	105 aa	Known RBP	4.16	□□□□□ -1.74
TDA3	YHR009C	YJL055W	P47044	245 aa		4.16	□□□□□ -1.74
TDA3	YHR009C	YTP1	P53584	459 aa		4.16	□□□□□ -1.74
TDA3	YHR009C	PEX25	Q02969	394 aa		4.16	□□□□□ -1.74
TDA3	YHR009C	YDR286C	Q05530	114 aa		4.16	□□□□□ -1.74
TDA3	YHR009C	MON2	P48563	1636 aa	Predicted RBP	4.15	□□□□□ -1.74
TDA3	YHR009C	CLB2	P24869	491 aa		4.15	□□□□□ -1.74
TDA3	YHR009C	PUP2	P32379	260 aa		4.15	□□□□□ -1.74
TDA3	YHR009C	YME2	P32843	850 aa		4.15	□□□□□ -1.74
TDA3	YHR009C	ARP1	P38696	384 aa		4.15	□□□□□ -1.74
TDA3	YHR009C	YJL107C	P42947	387 aa		4.15	□□□□□ -1.74
TDA3	YHR009C	STU2	P46675	888 aa		4.15	□□□□□ -1.74
TDA3	YHR009C	ATP22	P50273	684 aa	Predicted RBP	4.15	□□□□□ -1.74
TDA3	YHR009C	ORC5	P50874	479 aa		4.15	□□□□□ -1.74
TDA3	YHR009C	CAF130	P53280	1122 aa	Predicted RBP	4.15	□□□□□ -1.74
TDA3	YHR009C	MEH1	Q02205	184 aa		4.15	□□□□□ -1.74
TDA3	YHR009C	DON1	Q05610	365 aa		4.15	□□□□□ -1.74
TDA3	YHR009C	ECM30	Q06673	1274 aa		4.15	□□□□□ -1.74
TDA3	YHR009C	IRC10	Q08118	586 aa		4.15	□□□□□ -1.74
TDA3	YHR009C	SPE3	Q12074	293 aa	Known RBP	4.15	□□□□□ -1.74
TDA3	YHR009C	SUT2	Q12286	268 aa		4.15	□□□□□ -1.74
TDA3	YHR009C	ARG81	P05085	880 aa		4.14	□□□□□ -1.75
TDA3	YHR009C	RPL31B	P0C2H9	113 aa	Known RBP	4.14	□□□□□ -1.75
TDA3	YHR009C	PPH22	P23595	377 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms