RNA–Protein interactions for RNA: YCR097W

HMRA1, Transcript of Silenced copy of a1 at HMR, yeastyeast

Gene HMRA1, Length 381 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HMRA1YCR097W YMR160WQ03823 816 aa2.8□□□□□ -1.96
HMRA1YCR097W ERV2Q12284 196 aa2.8□□□□□ -1.96
HMRA1YCR097W AMD1P15274 810 aaKnown RBP2.79□□□□□ -1.96
HMRA1YCR097W NCP1P16603 691 aaKnown RBP2.79□□□□□ -1.96
HMRA1YCR097W PUT3P25502 979 aaPredicted RBP2.79□□□□□ -1.96
HMRA1YCR097W CDC15P27636 974 aa2.79□□□□□ -1.96
HMRA1YCR097W CBF2P32504 956 aa2.79□□□□□ -1.96
HMRA1YCR097W PUG1P40100 303 aa2.79□□□□□ -1.96
HMRA1YCR097W ALG8P40351 577 aa2.79□□□□□ -1.96
HMRA1YCR097W FAF1P40546 346 aaPredicted RBP2.79□□□□□ -1.96
HMRA1YCR097W PYK2P52489 506 aaKnown RBP2.79□□□□□ -1.96
HMRA1YCR097W YPL014WQ02606 381 aa2.79□□□□□ -1.96
HMRA1YCR097W HIM1Q06674 414 aa2.79□□□□□ -1.96
HMRA1YCR097W SYO1Q07395 620 aa2.79□□□□□ -1.96
HMRA1YCR097W SPE2P21182 396 aa2.78□□□□□ -1.96
HMRA1YCR097W OSH3P38713 996 aaKnown RBP2.78□□□□□ -1.96
HMRA1YCR097W INN1P53901 409 aa2.78□□□□□ -1.96
HMRA1YCR097W ARK1P53974 638 aa2.78□□□□□ -1.96
HMRA1YCR097W ZDS2P54786 942 aa2.78□□□□□ -1.96
HMRA1YCR097W YDL009CQ12210 107 aa2.78□□□□□ -1.96
HMRA1YCR097W INP53Q12271 1107 aa2.78□□□□□ -1.96
HMRA1YCR097W CTF3Q12748 733 aa2.78□□□□□ -1.96
HMRA1YCR097W PUT2P07275 575 aa2.77□□□□□ -1.97
HMRA1YCR097W TY2A-LR1P0C2J4 438 aa2.77□□□□□ -1.97
HMRA1YCR097W TY2A-FP0CX61 438 aa2.77□□□□□ -1.97
HMRA1YCR097W TY2A-GR2P0CX62 438 aa2.77□□□□□ -1.97
HMRA1YCR097W APE1P14904 514 aa2.77□□□□□ -1.97
HMRA1YCR097W RNA14P25298 677 aaKnown RBP2.77□□□□□ -1.97
HMRA1YCR097W TY2A-CP25383 438 aa2.77□□□□□ -1.97
HMRA1YCR097W SNU114P36048 1008 aaKnown RBP2.77□□□□□ -1.97
HMRA1YCR097W RPS10BP46784 105 aaKnown RBP2.77□□□□□ -1.97
HMRA1YCR097W SNG1P46950 547 aa2.77□□□□□ -1.97
HMRA1YCR097W TGL2P54857 326 aa2.77□□□□□ -1.97
HMRA1YCR097W RHO4Q00246 291 aa2.77□□□□□ -1.97
HMRA1YCR097W TY2A-DR2Q03483 438 aa2.77□□□□□ -1.97
HMRA1YCR097W EMI2Q04409 500 aaKnown RBP2.77□□□□□ -1.97
HMRA1YCR097W PBA1Q05778 276 aa2.77□□□□□ -1.97
HMRA1YCR097W TY2A-BQ12260 438 aa2.77□□□□□ -1.97
HMRA1YCR097W RBD2Q12270 262 aa2.77□□□□□ -1.97
HMRA1YCR097W TY2A-OR2Q12293 438 aa2.77□□□□□ -1.97
HMRA1YCR097W TY2A-DR1Q12392 438 aa2.77□□□□□ -1.97
HMRA1YCR097W TY2A-OR1Q12439 438 aa2.77□□□□□ -1.97
HMRA1YCR097W TY2A-DR3Q99303 438 aa2.77□□□□□ -1.97
HMRA1YCR097W HHF1P02309 103 aaKnown RBP2.76□□□□□ -1.97
HMRA1YCR097W FOL1P53848 824 aa2.76□□□□□ -1.97
HMRA1YCR097W RRN11Q04712 507 aa2.76□□□□□ -1.97
HMRA1YCR097W COX17Q12287 69 aa2.76□□□□□ -1.97
HMRA1YCR097W ARG81P05085 880 aa2.75□□□□□ -1.97
HMRA1YCR097W LPD1P09624 499 aaKnown RBP2.75□□□□□ -1.97
HMRA1YCR097W UIP3P39547 235 aa2.75□□□□□ -1.97
HMRA1YCR097W COG1P53079 417 aa2.75□□□□□ -1.97
HMRA1YCR097W RPS10AQ08745 105 aaPredicted RBP2.75□□□□□ -1.97
HMRA1YCR097W ERG27Q12452 347 aaKnown RBP2.75□□□□□ -1.97
HMRA1YCR097W NKP1Q12493 238 aa2.75□□□□□ -1.97
HMRA1YCR097W CPR1P14832 162 aaKnown RBP2.74□□□□□ -1.97
HMRA1YCR097W ARO2P28777 376 aaKnown RBP2.74□□□□□ -1.97
HMRA1YCR097W SMM1P53720 384 aaKnown RBP2.74□□□□□ -1.97
HMRA1YCR097W ADH2P00331 348 aaKnown RBP2.73□□□□□ -1.97
HMRA1YCR097W PFK26P40433 827 aaKnown RBP2.73□□□□□ -1.97
HMRA1YCR097W YNR061CP53747 219 aa2.73□□□□□ -1.97
HMRA1YCR097W BNA5Q05979 453 aa2.73□□□□□ -1.97
HMRA1YCR097W SGV1P23293 657 aaKnown RBP2.72□□□□□ -1.97
HMRA1YCR097W TSC10P38342 320 aa2.72□□□□□ -1.97
HMRA1YCR097W DBP8P38719 431 aa2.72□□□□□ -1.97
HMRA1YCR097W HAT2P39984 401 aa2.72□□□□□ -1.97
HMRA1YCR097W VPS27P40343 622 aaKnown RBP2.72□□□□□ -1.97
HMRA1YCR097W YIL067CP40514 678 aa2.72□□□□□ -1.97
HMRA1YCR097W MRPL35Q06678 367 aa2.72□□□□□ -1.97
HMRA1YCR097W PCD1Q12524 340 aa2.72□□□□□ -1.97
HMRA1YCR097W MPD2Q99316 277 aa2.72□□□□□ -1.97
HMRA1YCR097W MSS18P08593 268 aa2.71□□□□□ -1.98
HMRA1YCR097W MRP4P32902 394 aa2.71□□□□□ -1.98
HMRA1YCR097W NPR3P38742 1146 aa2.71□□□□□ -1.98
HMRA1YCR097W SGM1P47166 707 aa2.71□□□□□ -1.98
HMRA1YCR097W SHY1P53266 389 aa2.71□□□□□ -1.98
HMRA1YCR097W CIA1Q05583 330 aa2.71□□□□□ -1.98
HMRA1YCR097W MRPL51Q06090 140 aaPredicted RBP2.71□□□□□ -1.98
HMRA1YCR097W SDH5Q08230 162 aa2.71□□□□□ -1.98
HMRA1YCR097W YOR019WQ99248 730 aa2.71□□□□□ -1.98
HMRA1YCR097W YKL133CP36066 463 aa2.7□□□□□ -1.98
HMRA1YCR097W UTH1P36135 365 aa2.7□□□□□ -1.98
HMRA1YCR097W FMP10P40098 244 aa2.7□□□□□ -1.98
HMRA1YCR097W REE1P40893 198 aa2.7□□□□□ -1.98
HMRA1YCR097W YMR027WQ04371 470 aa2.7□□□□□ -1.98
HMRA1YCR097W VCX1Q99385 411 aa2.7□□□□□ -1.98
HMRA1YCR097W TPK1P06244 397 aa2.69□□□□□ -1.98
HMRA1YCR097W RVS161P25343 265 aaKnown RBP2.69□□□□□ -1.98
HMRA1YCR097W MRPL36P36531 177 aa2.69□□□□□ -1.98
HMRA1YCR097W ERG26P53199 349 aaKnown RBP2.69□□□□□ -1.98
HMRA1YCR097W DOS2P54858 310 aa2.69□□□□□ -1.98
HMRA1YCR097W RSM23Q01163 450 aa2.69□□□□□ -1.98
HMRA1YCR097W MLC2Q06580 163 aa2.69□□□□□ -1.98
HMRA1YCR097W ECM30Q06673 1274 aa2.69□□□□□ -1.98
HMRA1YCR097W MRP21P38175 177 aa2.68□□□□□ -1.98
HMRA1YCR097W DIA4P38705 446 aaPredicted RBP2.68□□□□□ -1.98
HMRA1YCR097W HIS6P40545 261 aa2.68□□□□□ -1.98
HMRA1YCR097W SCD6P45978 349 aaKnown RBP RIP-Chip data2.68□□□□□ -1.98not detected
HMRA1YCR097W TSA2Q04120 196 aa2.68□□□□□ -1.98
HMRA1YCR097W HEM15P16622 393 aa2.67□□□□□ -1.98
HMRA1YCR097W SGF29P25554 259 aa2.67□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 46.4 ms