RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C CNA1P23287 553 aa3.34□□□□□ -1.87
SHG1YBR258C CDC15P27636 974 aa3.34□□□□□ -1.87
SHG1YBR258C MSS51P32335 436 aa3.34□□□□□ -1.87
SHG1YBR258C PDB1P32473 366 aaKnown RBP3.34□□□□□ -1.87
SHG1YBR258C SOF1P33750 489 aaKnown RBP3.34□□□□□ -1.87
SHG1YBR258C YTA12P40341 825 aa3.34□□□□□ -1.87
SHG1YBR258C YJR061WP40355 935 aa3.34□□□□□ -1.87
SHG1YBR258C SEC24P40482 926 aaKnown RBP3.34□□□□□ -1.87
SHG1YBR258C XBP1P40489 647 aa3.34□□□□□ -1.87
SHG1YBR258C IME4P41833 600 aa3.34□□□□□ -1.87
SHG1YBR258C YFR016CP43597 1233 aaKnown RBP3.34□□□□□ -1.87
SHG1YBR258C BSC5P53755 489 aa3.34□□□□□ -1.87
SHG1YBR258C IST1P53843 298 aaPredicted RBP3.34□□□□□ -1.87
SHG1YBR258C SUB1P54000 292 aaKnown RBP3.34□□□□□ -1.87
SHG1YBR258C CAC2Q04199 468 aa3.34□□□□□ -1.87
SHG1YBR258C SWF1Q04629 336 aa3.34□□□□□ -1.87
SHG1YBR258C PDR8Q06149 701 aa3.34□□□□□ -1.87
SHG1YBR258C DIB1Q06819 143 aaPredicted RBP3.34□□□□□ -1.87
SHG1YBR258C PFA4Q12006 378 aa3.34□□□□□ -1.87
SHG1YBR258C ATG9Q12142 997 aa3.34□□□□□ -1.87
SHG1YBR258C YBR085C-AO43137 85 aa3.33□□□□□ -1.88
SHG1YBR258C CHO1P08456 276 aa3.33□□□□□ -1.88
SHG1YBR258C SUI3P09064 285 aaKnown RBP3.33□□□□□ -1.88
SHG1YBR258C CDC16P09798 840 aa3.33□□□□□ -1.88
SHG1YBR258C MDM10P18409 493 aa3.33□□□□□ -1.88
SHG1YBR258C YAP1P19880 650 aaKnown RBP3.33□□□□□ -1.88
SHG1YBR258C CLB2P24869 491 aa3.33□□□□□ -1.88
SHG1YBR258C IMP2'P32351 346 aa3.33□□□□□ -1.88
SHG1YBR258C ALY1P36117 915 aa3.33□□□□□ -1.88
SHG1YBR258C PXL1P36166 706 aa3.33□□□□□ -1.88
SHG1YBR258C UIP3P39547 235 aa3.33□□□□□ -1.88
SHG1YBR258C NOP16P40007 231 aaKnown RBP3.33□□□□□ -1.88
SHG1YBR258C YIL024CP40543 189 aa3.33□□□□□ -1.88
SHG1YBR258C NET1P47035 1189 aa3.33□□□□□ -1.88
SHG1YBR258C FCP1Q03254 732 aa3.33□□□□□ -1.88
SHG1YBR258C SYF1Q04048 859 aaPredicted RBP3.33□□□□□ -1.88
SHG1YBR258C YDR056CQ12025 205 aa3.33□□□□□ -1.88
SHG1YBR258C RRI2Q12348 645 aa3.33□□□□□ -1.88
SHG1YBR258C RRI1Q12468 440 aa3.33□□□□□ -1.88
SHG1YBR258C CDC24P11433 854 aaPredicted RBP3.32□□□□□ -1.88
SHG1YBR258C AIM17P23180 465 aaKnown RBP3.32□□□□□ -1.88
SHG1YBR258C SAC6P32599 642 aaKnown RBP3.32□□□□□ -1.88
SHG1YBR258C SNU114P36048 1008 aaKnown RBP3.32□□□□□ -1.88
SHG1YBR258C DIA4P38705 446 aaPredicted RBP3.32□□□□□ -1.88
SHG1YBR258C JHD1P40034 492 aa3.32□□□□□ -1.88
SHG1YBR258C MNT3P40549 630 aa3.32□□□□□ -1.88
SHG1YBR258C UPF3P48412 387 aaKnown RBP3.32□□□□□ -1.88
SHG1YBR258C UBP8P50102 471 aa3.32□□□□□ -1.88
SHG1YBR258C ASI1P54074 624 aa3.32□□□□□ -1.88
SHG1YBR258C YSA1Q01976 231 aa3.32□□□□□ -1.88
SHG1YBR258C SKG3Q06315 1026 aa3.32□□□□□ -1.88
SHG1YBR258C YPL272CQ08984 517 aa3.32□□□□□ -1.88
SHG1YBR258C HXK2P04807 486 aaKnown RBP3.31□□□□□ -1.88
SHG1YBR258C PTP1P25044 335 aa3.31□□□□□ -1.88
SHG1YBR258C YCP4P25349 247 aaKnown RBP3.31□□□□□ -1.88
SHG1YBR258C CHS3P29465 1165 aa3.31□□□□□ -1.88
SHG1YBR258C SAC1P32368 623 aaKnown RBP3.31□□□□□ -1.88
SHG1YBR258C MUD2P36084 527 aaKnown RBP3.31□□□□□ -1.88
SHG1YBR258C SPC97P38863 823 aa3.31□□□□□ -1.88
SHG1YBR258C PCI8P40512 444 aa3.31□□□□□ -1.88
SHG1YBR258C DPB11P47027 764 aaPredicted RBP3.31□□□□□ -1.88
SHG1YBR258C YGL036WP53185 909 aaPredicted RBP3.31□□□□□ -1.88
SHG1YBR258C RPL15BP54780 204 aaPredicted RBP3.31□□□□□ -1.88
SHG1YBR258C STP1Q00947 519 aa3.31□□□□□ -1.88
SHG1YBR258C ENT4Q07872 247 aa3.31□□□□□ -1.88
SHG1YBR258C SKM1Q12469 655 aa3.31□□□□□ -1.88
SHG1YBR258C YER145C-AA0A023PYF4 145 aa3.3□□□□□ -1.88
SHG1YBR258C HSC82P15108 705 aaKnown RBP3.3□□□□□ -1.88
SHG1YBR258C KRS1P15180 591 aaKnown RBP3.3□□□□□ -1.88
SHG1YBR258C KAR3P17119 729 aa3.3□□□□□ -1.88
SHG1YBR258C PWP1P21304 576 aaKnown RBP3.3□□□□□ -1.88
SHG1YBR258C CDC60P26637 1090 aaKnown RBP3.3□□□□□ -1.88
SHG1YBR258C ESL2P36168 1195 aa3.3□□□□□ -1.88
SHG1YBR258C LEU5P38702 357 aa3.3□□□□□ -1.88
SHG1YBR258C NAB3P38996 802 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
SHG1YBR258C YFR020WP43600 232 aa3.3□□□□□ -1.88
SHG1YBR258C SMC3P47037 1230 aa3.3□□□□□ -1.88
SHG1YBR258C STR3P53101 465 aaKnown RBP3.3□□□□□ -1.88
SHG1YBR258C YMR178WQ03219 274 aaKnown RBP3.3□□□□□ -1.88
SHG1YBR258C TMA64Q04600 565 aaKnown RBP3.3□□□□□ -1.88
SHG1YBR258C YLR049CQ12110 428 aa3.3□□□□□ -1.88
SHG1YBR258C INP53Q12271 1107 aa3.3□□□□□ -1.88
SHG1YBR258C YPR089WO13585 888 aa3.29□□□□□ -1.88
SHG1YBR258C RAP1P11938 827 aa3.29□□□□□ -1.88
SHG1YBR258C TKL1P23254 680 aaKnown RBP3.29□□□□□ -1.88
SHG1YBR258C YCR006CP25350 157 aa3.29□□□□□ -1.88
SHG1YBR258C PPZ1P26570 692 aa3.29□□□□□ -1.88
SHG1YBR258C GAC1P28006 793 aa3.29□□□□□ -1.88
SHG1YBR258C ASK1P35734 292 aa3.29□□□□□ -1.88
SHG1YBR258C YMR124WP39523 943 aaKnown RBP3.29□□□□□ -1.88
SHG1YBR258C LYS20P48570 428 aaKnown RBP3.29□□□□□ -1.88
SHG1YBR258C PFA5Q03289 374 aa3.29□□□□□ -1.88
SHG1YBR258C RMT2Q03305 412 aa3.29□□□□□ -1.88
SHG1YBR258C RAD30Q04049 632 aa3.29□□□□□ -1.88
SHG1YBR258C RTT109Q07794 436 aa3.29□□□□□ -1.88
SHG1YBR258C PSR1Q07800 427 aa3.29□□□□□ -1.88
SHG1YBR258C ETT1Q08421 412 aaKnown RBP3.29□□□□□ -1.88
SHG1YBR258C FRE3Q08905 711 aa3.29□□□□□ -1.88
SHG1YBR258C ATX2Q12067 313 aa3.29□□□□□ -1.88
SHG1YBR258C CFT2Q12102 859 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 136.5 ms