RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 TEKT3Q9BXF9 490 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 MRPL44Q9H9J2 332 aaKnown RBP6.88□□□□□ -1.31
CDKL5-205ENST00000623535 HACL1Q9UJ83 578 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 STRIP2Q9ULQ0 834 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 SNTNA6NMZ2 147 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 SLC45A4Q5BKX6 768 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 ANKS6Q68DC2 871 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 CCDC84Q86UT8 332 aaPredicted RBP6.88□□□□□ -1.31
CDKL5-205ENST00000623535 GRXCR2A6NFK2 248 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 EXOC3O60645 756 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 ATP1A1P05023 1023 aaKnown RBP6.88□□□□□ -1.31
CDKL5-205ENST00000623535 HAND2P61296 217 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 AOC3Q16853 763 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 CHD1LQ86WJ1 897 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 XAGE3Q8WTP9 111 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 FAM129AQ9BZQ8 928 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 IQUBQ8NA54 791 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 LRRIQ4A6NIV6 560 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 TEX28O15482 410 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 ACADMP11310 421 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 YY1P25490 414 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 HOXA7P31268 230 aaPredicted RBP6.87□□□□□ -1.31
CDKL5-205ENST00000623535 PDE6CP51160 858 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 CCT2P78371 535 aaKnown RBP6.87□□□□□ -1.31
CDKL5-205ENST00000623535 SNX19Q92543 992 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 CHAMP1Q96JM3 812 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 PALD1Q9ULE6 856 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 PARD3Q8TEW0 1356 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 EVCP57679 992 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 SMC5Q8IY18 1101 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 PPP1R13BQ96KQ4 1090 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 BIN1O00499 593 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 XKR9Q5GH70 373 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 KRT25Q7Z3Z0 450 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 SYCE1Q8N0S2 351 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 GBP7Q8N8V2 638 aaPredicted RBP6.87□□□□□ -1.31
CDKL5-205ENST00000623535 LRRC37BQ96QE4 947 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 KLF18A0A0U1RQI7 1052 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 CCDC151A5D8V7 595 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 LRRC31Q6UY01 552 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 SZRD1Q7Z422 152 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 AFAP1L1Q8TED9 768 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 DDX19AQ9NUU7 478 aaKnown RBP6.87□□□□□ -1.31
CDKL5-205ENST00000623535 TROQ12816 1431 aaPredicted RBP6.87□□□□□ -1.31
CDKL5-205ENST00000623535 MCM7P33993 719 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 ARL4AP40617 200 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 CPLX4Q7Z7G2 160 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 SPATA5Q8NB90 893 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 TRIM35Q9UPQ4 493 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 RSPH10B2B2RC85 870 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 GCNT3O95395 438 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 RSPH10BP0C881 870 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 ATICP31939 592 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 IRX4P78413 519 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 TBC1D8BQ0IIM8 1120 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 RNF180Q86T96 592 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 ASIC4Q96FT7 647 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 CAPZA3Q96KX2 299 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 BICC1Q9H694 974 aaKnown RBP6.87□□□□□ -1.31
CDKL5-205ENST00000623535 EXOC6BQ9Y2D4 811 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 GRM8O00222 908 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 MED7O43513 233 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 GTF2IP78347 998 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 FRA10AC1Q70Z53 315 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 K7ELQ4 463 aaPredicted RBP6.87□□□□□ -1.31
CDKL5-205ENST00000623535 SLFN14P0C7P3 912 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 SOX5P35711 763 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 CYP4A11Q02928 519 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 PTPN14Q15678 1187 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 SLC10A5Q5PT55 438 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 SEPT14Q6ZU15 432 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 SRLQ86TD4 932 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 SEC62Q99442 399 aaKnown RBP6.87□□□□□ -1.31
CDKL5-205ENST00000623535 PAG1Q9NWQ8 432 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 SUPT3HB4E1H0 165 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 FCGRTP55899 365 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 MYL7Q01449 175 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 SNX17Q15036 470 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 ACCSLQ4AC99 568 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 SCYL1Q96KG9 808 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 RPGRIP1Q96KN7 1286 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 CDC42EP1Q00587 391 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 IL1RL1Q01638 556 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 PBXIP1Q96AQ6 731 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 GRPEL1Q9HAV7 217 aa6.87□□□□□ -1.31
CDKL5-205ENST00000623535 C6orf203Q9P0P8 240 aaPredicted RBP6.87□□□□□ -1.31
CDKL5-205ENST00000623535 LRRIQ3A6PVS8 624 aaPredicted RBP6.86□□□□□ -1.31
CDKL5-205ENST00000623535 STAG3L1P0CL83 205 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 TAF1CQ15572 869 aaPredicted RBP6.86□□□□□ -1.31
CDKL5-205ENST00000623535 BZW1Q7L1Q6 419 aaKnown RBP6.86□□□□□ -1.31
CDKL5-205ENST00000623535 GSDMAQ96QA5 445 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 DDX56Q9NY93 547 aaKnown RBP6.86□□□□□ -1.31
CDKL5-205ENST00000623535 SAE1Q9UBE0 346 aaPredicted RBP6.86□□□□□ -1.31
CDKL5-205ENST00000623535 NKTRP30414 1462 aaKnown RBP6.86□□□□□ -1.31
CDKL5-205ENST00000623535 EVI5O60447 810 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 IRX5P78411 483 aaPredicted RBP6.86□□□□□ -1.31
CDKL5-205ENST00000623535 ABCB5Q2M3G0 1257 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 IFNL3Q8IZI9 196 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 NSUN7Q8NE18 718 aaKnown RBP6.86□□□□□ -1.31
CDKL5-205ENST00000623535 FAM167AQ96KS9 214 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms