RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 APBA2Q99767 749 aa8.02□□□□□ -1.13
SCAMP1-205ENST00000614488 RNF32Q9H0A6 362 aa8.02□□□□□ -1.13
SCAMP1-205ENST00000614488 C19orf44Q9H6X5 657 aa8.02□□□□□ -1.13
SCAMP1-205ENST00000614488 SUGT1Q9Y2Z0 365 aa8.02□□□□□ -1.13
SCAMP1-205ENST00000614488 NOTOA8MTQ0 251 aa8.01□□□□□ -1.13
SCAMP1-205ENST00000614488 CD3EP07766 207 aa8.01□□□□□ -1.13
SCAMP1-205ENST00000614488 PPP2R5DQ14738 602 aa8.01□□□□□ -1.13
SCAMP1-205ENST00000614488 LCE3BQ5TA77 95 aa8.01□□□□□ -1.13
SCAMP1-205ENST00000614488 CYP2R1Q6VVX0 501 aa8.01□□□□□ -1.13
SCAMP1-205ENST00000614488 CEP128Q6ZU80 1094 aa8.01□□□□□ -1.13
SCAMP1-205ENST00000614488 ANKS3Q6ZW76 656 aa8.01□□□□□ -1.13
SCAMP1-205ENST00000614488 HNRNPLLQ8WVV9 542 aaKnown RBP8.01□□□□□ -1.13
SCAMP1-205ENST00000614488 FCRL3Q96P31 734 aaPredicted RBP8.01□□□□□ -1.13
SCAMP1-205ENST00000614488 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.01□□□□□ -1.13
SCAMP1-205ENST00000614488 APEX2Q9UBZ4 518 aa8.01□□□□□ -1.13
SCAMP1-205ENST00000614488 GPR55Q9Y2T6 319 aaPredicted RBP8.01□□□□□ -1.13
SCAMP1-205ENST00000614488 B2RBV5 119 aa8□□□□□ -1.13
SCAMP1-205ENST00000614488 FGF10O15520 208 aaPredicted RBP8□□□□□ -1.13
SCAMP1-205ENST00000614488 KLF4O43474 513 aa8□□□□□ -1.13
SCAMP1-205ENST00000614488 DDAH1O94760 285 aa8□□□□□ -1.13
SCAMP1-205ENST00000614488 SLC14A2Q15849 920 aa8□□□□□ -1.13
SCAMP1-205ENST00000614488 RCSD1Q6JBY9 416 aa8□□□□□ -1.13
SCAMP1-205ENST00000614488 OGFOD2Q6N063 350 aa8□□□□□ -1.13
SCAMP1-205ENST00000614488 POMZP3Q6PJE2 187 aa8□□□□□ -1.13
SCAMP1-205ENST00000614488 MPZL3Q6UWV2 235 aa8□□□□□ -1.13
SCAMP1-205ENST00000614488 NLRX1Q86UT6 975 aa8□□□□□ -1.13
SCAMP1-205ENST00000614488 POU5F2Q8N7G0 328 aa8□□□□□ -1.13
SCAMP1-205ENST00000614488 NAT16Q8N8M0 369 aa8□□□□□ -1.13
SCAMP1-205ENST00000614488 SHISA4Q96DD7 197 aa8□□□□□ -1.13
SCAMP1-205ENST00000614488 LIN37Q96GY3 246 aaPredicted RBP8□□□□□ -1.13
SCAMP1-205ENST00000614488 TANGO6Q9C0B7 1094 aa8□□□□□ -1.13
SCAMP1-205ENST00000614488 SLC6A17Q9H1V8 727 aa8□□□□□ -1.13
SCAMP1-205ENST00000614488 GPR160Q9UJ42 338 aa8□□□□□ -1.13
SCAMP1-205ENST00000614488 YBX2Q9Y2T7 364 aaKnown RBP8□□□□□ -1.13
SCAMP1-205ENST00000614488 A0A1W2PQ45 241 aaPredicted RBP7.99□□□□□ -1.13
SCAMP1-205ENST00000614488 A0A1W2PQY0 241 aa7.99□□□□□ -1.13
SCAMP1-205ENST00000614488 LRRC10BA6NIK2 292 aa7.99□□□□□ -1.13
SCAMP1-205ENST00000614488 AURKAO14965 403 aa7.99□□□□□ -1.13
SCAMP1-205ENST00000614488 SUSD5O60279 629 aa7.99□□□□□ -1.13
SCAMP1-205ENST00000614488 PSPNO60542 156 aa7.99□□□□□ -1.13
SCAMP1-205ENST00000614488 STK10O94804 968 aaKnown RBP7.99□□□□□ -1.13
SCAMP1-205ENST00000614488 IFNGR1P15260 489 aa7.99□□□□□ -1.13
SCAMP1-205ENST00000614488 CEBPAP49715 358 aaPredicted RBP7.99□□□□□ -1.13
SCAMP1-205ENST00000614488 RTP1P59025 263 aa7.99□□□□□ -1.13
SCAMP1-205ENST00000614488 AMPD2Q01433 879 aa7.99□□□□□ -1.13
SCAMP1-205ENST00000614488 SLCO6A1Q86UG4 719 aa7.99□□□□□ -1.13
SCAMP1-205ENST00000614488 IRF2BP1Q8IU81 584 aa7.99□□□□□ -1.13
SCAMP1-205ENST00000614488 BVESQ8NE79 360 aa7.99□□□□□ -1.13
SCAMP1-205ENST00000614488 MICAL1Q8TDZ2 1067 aa7.99□□□□□ -1.13
SCAMP1-205ENST00000614488 AKT3Q9Y243 479 aa7.99□□□□□ -1.13
SCAMP1-205ENST00000614488 EMC9Q9Y3B6 208 aa7.99□□□□□ -1.13
SCAMP1-205ENST00000614488 WTIPA6NIX2 430 aaPredicted RBP7.98□□□□□ -1.13
SCAMP1-205ENST00000614488 ATP2B1P20020 1258 aa7.98□□□□□ -1.13
SCAMP1-205ENST00000614488 DDR2Q16832 855 aa7.98□□□□□ -1.13
SCAMP1-205ENST00000614488 HSF5Q4G112 596 aaPredicted RBP7.98□□□□□ -1.13
SCAMP1-205ENST00000614488 HLA-DQA1Q5Y7H0 255 aa7.98□□□□□ -1.13
SCAMP1-205ENST00000614488 EEF1DP3Q658K8 133 aa7.98□□□□□ -1.13
SCAMP1-205ENST00000614488 MRM1Q6IN84 353 aaKnown RBP7.98□□□□□ -1.13
SCAMP1-205ENST00000614488 GALNT18Q6P9A2 607 aa7.98□□□□□ -1.13
SCAMP1-205ENST00000614488 TMEM52Q8NDY8 209 aa7.98□□□□□ -1.13
SCAMP1-205ENST00000614488 ARMC5Q96C12 935 aa7.98□□□□□ -1.13
SCAMP1-205ENST00000614488 INTS4Q96HW7 963 aaKnown RBP7.98□□□□□ -1.13
SCAMP1-205ENST00000614488 EPN3Q9H201 632 aa7.98□□□□□ -1.13
SCAMP1-205ENST00000614488 CRTAC1Q9NQ79 661 aa7.98□□□□□ -1.13
SCAMP1-205ENST00000614488 TAF6LQ9Y6J9 622 aa7.98□□□□□ -1.13
SCAMP1-205ENST00000614488 NOP56O00567 594 aaKnown RBP7.97□□□□□ -1.13
SCAMP1-205ENST00000614488 GJB6O95452 261 aa7.97□□□□□ -1.13
SCAMP1-205ENST00000614488 RAB33AQ14088 237 aa7.97□□□□□ -1.13
SCAMP1-205ENST00000614488 MLANAQ16655 118 aa7.97□□□□□ -1.13
SCAMP1-205ENST00000614488 EEPD1Q7L9B9 569 aa7.97□□□□□ -1.13
SCAMP1-205ENST00000614488 TRIM59Q8IWR1 403 aa7.97□□□□□ -1.13
SCAMP1-205ENST00000614488 CKAP2LQ8IYA6 745 aa7.97□□□□□ -1.13
SCAMP1-205ENST00000614488 CELF2-AS1Q8N7Q2 184 aa7.97□□□□□ -1.13
SCAMP1-205ENST00000614488 PTCHD1Q96NR3 888 aa7.97□□□□□ -1.13
SCAMP1-205ENST00000614488 MCMBPQ9BTE3 642 aa7.97□□□□□ -1.13
SCAMP1-205ENST00000614488 BACE2Q9Y5Z0 518 aa7.97□□□□□ -1.13
SCAMP1-205ENST00000614488 STXBP3O00186 592 aa7.96□□□□□ -1.14
SCAMP1-205ENST00000614488 VAMP4O75379 141 aa7.96□□□□□ -1.14
SCAMP1-205ENST00000614488 FARP2O94887 1054 aaPredicted RBP7.96□□□□□ -1.14
SCAMP1-205ENST00000614488 EFEMP2O95967 443 aa7.96□□□□□ -1.14
SCAMP1-205ENST00000614488 NBPF6Q5VWK0 638 aa7.96□□□□□ -1.14
SCAMP1-205ENST00000614488 PRR23BQ6ZRT6 265 aa7.96□□□□□ -1.14
SCAMP1-205ENST00000614488 MRGPRX3Q96LB0 322 aa7.96□□□□□ -1.14
SCAMP1-205ENST00000614488 NBPF4Q96M43 638 aa7.96□□□□□ -1.14
SCAMP1-205ENST00000614488 PLCD4Q9BRC7 762 aa7.96□□□□□ -1.14
SCAMP1-205ENST00000614488 KCNH1O95259 989 aa7.95□□□□□ -1.14
SCAMP1-205ENST00000614488 TBC1D8O95759 1140 aa7.95□□□□□ -1.14
SCAMP1-205ENST00000614488 PNLIPP16233 465 aa7.95□□□□□ -1.14
SCAMP1-205ENST00000614488 RBM10P98175 930 aaKnown RBP7.95□□□□□ -1.14
SCAMP1-205ENST00000614488 DPY19L1Q2PZI1 675 aa7.95□□□□□ -1.14
SCAMP1-205ENST00000614488 SV2CQ496J9 727 aa7.95□□□□□ -1.14
SCAMP1-205ENST00000614488 KRTAP19-1Q8IUB9 90 aa7.95□□□□□ -1.14
SCAMP1-205ENST00000614488 KSR1Q8IVT5 923 aa7.95□□□□□ -1.14
SCAMP1-205ENST00000614488 JMJD8Q96S16 334 aa7.95□□□□□ -1.14
SCAMP1-205ENST00000614488 EPB41L4BQ9H329 900 aa7.95□□□□□ -1.14
SCAMP1-205ENST00000614488 ACSL6Q9UKU0 697 aa7.95□□□□□ -1.14
SCAMP1-205ENST00000614488 C2orf71A6NGG8 1288 aa7.94□□□□□ -1.14
SCAMP1-205ENST00000614488 SEPHS1P49903 392 aa7.94□□□□□ -1.14
SCAMP1-205ENST00000614488 LAPTM5Q13571 262 aa7.94□□□□□ -1.14
SCAMP1-205ENST00000614488 SF3A1Q15459 793 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms