RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 ALDH1A1P00352 501 aa18.41■□□□□ 0.54
CSNK1D-212ENST00000580061 TAF1CQ15572 869 aaPredicted RBP18.41■□□□□ 0.54
CSNK1D-212ENST00000580061 QRICH1Q2TAL8 776 aa18.41■□□□□ 0.54
CSNK1D-212ENST00000580061 TRIM22Q8IYM9 498 aa18.41■□□□□ 0.54
CSNK1D-212ENST00000580061 MB21D1Q8N884 522 aa18.41■□□□□ 0.54
CSNK1D-212ENST00000580061 SMCR8Q8TEV9 937 aaPredicted RBP18.41■□□□□ 0.54
CSNK1D-212ENST00000580061 GTF3C2Q8WUA4 911 aaPredicted RBP18.41■□□□□ 0.54
CSNK1D-212ENST00000580061 INTS4Q96HW7 963 aaKnown RBP18.41■□□□□ 0.54
CSNK1D-212ENST00000580061 RBM27Q9P2N5 1060 aaKnown RBP18.41■□□□□ 0.54
CSNK1D-212ENST00000580061 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.41■□□□□ 0.54
CSNK1D-212ENST00000580061 ZNF536O15090 1300 aa18.41■□□□□ 0.54
CSNK1D-212ENST00000580061 DEXIO95424 95 aa18.4■□□□□ 0.54
CSNK1D-212ENST00000580061 FDPSP14324 419 aaKnown RBP18.4■□□□□ 0.54
CSNK1D-212ENST00000580061 GCLCP48506 637 aaPredicted RBP18.4■□□□□ 0.54
CSNK1D-212ENST00000580061 AKAP17AQ02040 695 aaKnown RBP18.4■□□□□ 0.54
CSNK1D-212ENST00000580061 TMEM132BQ14DG7 1078 aa18.4■□□□□ 0.54
CSNK1D-212ENST00000580061 PKN1Q16512 942 aa18.4■□□□□ 0.54
CSNK1D-212ENST00000580061 CCDC174Q6PII3 467 aa18.4■□□□□ 0.54
CSNK1D-212ENST00000580061 DNAJC5GQ8N7S2 189 aa18.4■□□□□ 0.54
CSNK1D-212ENST00000580061 BTBD7Q9P203 1132 aa18.4■□□□□ 0.54
CSNK1D-212ENST00000580061 RBPJLQ9UBG7 517 aa18.4■□□□□ 0.54
CSNK1D-212ENST00000580061 SEC63Q9UGP8 760 aaKnown RBP18.4■□□□□ 0.54
CSNK1D-212ENST00000580061 ZNF214Q9UL59 606 aaPredicted RBP18.4■□□□□ 0.54
CSNK1D-212ENST00000580061 CTDP1Q9Y5B0 961 aaPredicted RBP18.4■□□□□ 0.54
CSNK1D-212ENST00000580061 ADGRA2Q96PE1 1338 aa18.4■□□□□ 0.54
CSNK1D-212ENST00000580061 PCNTO95613 3336 aa18.39■□□□□ 0.53
CSNK1D-212ENST00000580061 ATP2A1O14983 1001 aa18.39■□□□□ 0.53
CSNK1D-212ENST00000580061 CA12O43570 354 aa18.39■□□□□ 0.53
CSNK1D-212ENST00000580061 PPP1R11O60927 126 aaPredicted RBP18.39■□□□□ 0.53
CSNK1D-212ENST00000580061 CNMDO75829 334 aa18.39■□□□□ 0.53
CSNK1D-212ENST00000580061 OAZ1P54368 228 aa18.39■□□□□ 0.53
CSNK1D-212ENST00000580061 HMGN5P82970 282 aaKnown RBP18.39■□□□□ 0.53
CSNK1D-212ENST00000580061 PFKFB3Q16875 520 aaPredicted RBP18.39■□□□□ 0.53
CSNK1D-212ENST00000580061 DDX11Q96FC9 970 aa18.39■□□□□ 0.53
CSNK1D-212ENST00000580061 ZFYVE28Q9HCC9 887 aa18.39■□□□□ 0.53
CSNK1D-212ENST00000580061 RAVER2Q9HCJ3 691 aaKnown RBP18.39■□□□□ 0.53
CSNK1D-212ENST00000580061 TXNRD2Q9NNW7 524 aa18.39■□□□□ 0.53
CSNK1D-212ENST00000580061 ORC3Q9UBD5 711 aaPredicted RBP18.39■□□□□ 0.53
CSNK1D-212ENST00000580061 RABGAP1Q9Y3P9 1069 aa18.39■□□□□ 0.53
CSNK1D-212ENST00000580061 ICAM1P05362 532 aa18.38■□□□□ 0.53
CSNK1D-212ENST00000580061 SCG2P13521 617 aa18.38■□□□□ 0.53
CSNK1D-212ENST00000580061 CRHR2Q13324 411 aa18.38■□□□□ 0.53
CSNK1D-212ENST00000580061 FBXO11Q86XK2 927 aa18.38■□□□□ 0.53
CSNK1D-212ENST00000580061 CPXCR1Q8N123 301 aa18.38■□□□□ 0.53
CSNK1D-212ENST00000580061 PAGR1Q9BTK6 254 aa18.38■□□□□ 0.53
CSNK1D-212ENST00000580061 AMNQ9BXJ7 453 aa18.38■□□□□ 0.53
CSNK1D-212ENST00000580061 MORF4L1Q9UBU8 362 aa18.38■□□□□ 0.53
CSNK1D-212ENST00000580061 SMC3Q9UQE7 1217 aa18.38■□□□□ 0.53
CSNK1D-212ENST00000580061 TLR2O60603 784 aa18.37■□□□□ 0.53
CSNK1D-212ENST00000580061 PEX10O60683 326 aa18.37■□□□□ 0.53
CSNK1D-212ENST00000580061 AGBL1Q96MI9 1066 aa18.37■□□□□ 0.53
CSNK1D-212ENST00000580061 CFHR5Q9BXR6 569 aa18.37■□□□□ 0.53
CSNK1D-212ENST00000580061 TEX13BQ9BXU2 312 aa18.37■□□□□ 0.53
CSNK1D-212ENST00000580061 SPATC1LQ9H0A9 340 aa18.37■□□□□ 0.53
CSNK1D-212ENST00000580061 FOXD4L1Q9NU39 408 aa18.37■□□□□ 0.53
CSNK1D-212ENST00000580061 RNF186Q9NXI6 227 aa18.37■□□□□ 0.53
CSNK1D-212ENST00000580061 PNMA2Q9UL42 364 aa18.37■□□□□ 0.53
CSNK1D-212ENST00000580061 CEP350Q5VT06 3117 aa18.37■□□□□ 0.53
CSNK1D-212ENST00000580061 RBBP6Q7Z6E9 1792 aaKnown RBP18.37■□□□□ 0.53
CSNK1D-212ENST00000580061 HSP90AA1P07900 732 aaKnown RBP18.36■□□□□ 0.53
CSNK1D-212ENST00000580061 BCRP11274 1271 aa18.36■□□□□ 0.53
CSNK1D-212ENST00000580061 GJB2P29033 226 aa18.36■□□□□ 0.53
CSNK1D-212ENST00000580061 STAT3P40763 770 aa18.36■□□□□ 0.53
CSNK1D-212ENST00000580061 ERVK-9P63128 1117 aa18.36■□□□□ 0.53
CSNK1D-212ENST00000580061 ERVK-24P63145 666 aa18.36■□□□□ 0.53
CSNK1D-212ENST00000580061 FAM110CQ1W6H9 321 aa18.36■□□□□ 0.53
CSNK1D-212ENST00000580061 Q3C1V9 767 aa18.36■□□□□ 0.53
CSNK1D-212ENST00000580061 USH1GQ495M9 461 aa18.36■□□□□ 0.53
CSNK1D-212ENST00000580061 WWC2Q6AWC2 1192 aa18.36■□□□□ 0.53
CSNK1D-212ENST00000580061 C17orf99Q6UX52 265 aa18.36■□□□□ 0.53
CSNK1D-212ENST00000580061 ANKRD13CQ8N6S4 541 aa18.36■□□□□ 0.53
CSNK1D-212ENST00000580061 WASF1Q92558 559 aa18.36■□□□□ 0.53
CSNK1D-212ENST00000580061 GPKOWQ92917 476 aaPredicted RBP eCLIP18.36■□□□□ 0.53
CSNK1D-212ENST00000580061 COA7Q96BR5 231 aa18.36■□□□□ 0.53
CSNK1D-212ENST00000580061 AIFM3Q96NN9 605 aa18.36■□□□□ 0.53
CSNK1D-212ENST00000580061 CPA4Q9UI42 421 aa18.36■□□□□ 0.53
CSNK1D-212ENST00000580061 CCPG1Q9ULG6 757 aa18.36■□□□□ 0.53
CSNK1D-212ENST00000580061 hCG_1984214I3L0E3 225 aa18.35■□□□□ 0.53
CSNK1D-212ENST00000580061 TAL1P17542 331 aaPredicted RBP18.35■□□□□ 0.53
CSNK1D-212ENST00000580061 SLC4A3P48751 1232 aa18.35■□□□□ 0.53
CSNK1D-212ENST00000580061 TRAF1Q13077 416 aa18.35■□□□□ 0.53
CSNK1D-212ENST00000580061 PLS1Q14651 629 aa18.35■□□□□ 0.53
CSNK1D-212ENST00000580061 SNRNP48Q6IEG0 339 aaKnown RBP18.35■□□□□ 0.53
CSNK1D-212ENST00000580061 HEATR3Q7Z4Q2 680 aa18.35■□□□□ 0.53
CSNK1D-212ENST00000580061 RIOX2Q8IUF8 465 aa18.35■□□□□ 0.53
CSNK1D-212ENST00000580061 ZNF713Q8N859 430 aaPredicted RBP18.35■□□□□ 0.53
CSNK1D-212ENST00000580061 FAM184AQ8NB25 1140 aa18.35■□□□□ 0.53
CSNK1D-212ENST00000580061 GPRC5AQ8NFJ5 357 aa18.35■□□□□ 0.53
CSNK1D-212ENST00000580061 ALG1Q9BT22 464 aa18.35■□□□□ 0.53
CSNK1D-212ENST00000580061 BARHL2Q9NY43 387 aa18.35■□□□□ 0.53
CSNK1D-212ENST00000580061 RIPK3Q9Y572 518 aa18.35■□□□□ 0.53
CSNK1D-212ENST00000580061 PCDHA1Q9Y5I3 950 aa18.35■□□□□ 0.53
CSNK1D-212ENST00000580061 ABCB11O95342 1321 aa18.34■□□□□ 0.53
CSNK1D-212ENST00000580061 STXBP3O00186 592 aa18.34■□□□□ 0.53
CSNK1D-212ENST00000580061 TRPA1O75762 1119 aa18.34■□□□□ 0.53
CSNK1D-212ENST00000580061 MAP2K1Q02750 393 aaPredicted RBP18.34■□□□□ 0.53
CSNK1D-212ENST00000580061 TYW1BQ6NUM6 668 aa18.34■□□□□ 0.53
CSNK1D-212ENST00000580061 SPRYD3Q8NCJ5 442 aa18.34■□□□□ 0.53
CSNK1D-212ENST00000580061 SHISA4Q96DD7 197 aa18.34■□□□□ 0.53
CSNK1D-212ENST00000580061 MOV10L1Q9BXT6 1211 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms