RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 EBF1Q9UH73 591 aa7.38□□□□□ -1.23
USP8-218ENST00000561330 FITM1A5D6W6 292 aa7.37□□□□□ -1.23
USP8-218ENST00000561330 ERVFC1P60507 584 aa7.37□□□□□ -1.23
USP8-218ENST00000561330 AMPD2Q01433 879 aa7.37□□□□□ -1.23
USP8-218ENST00000561330 RBL2Q08999 1139 aa7.37□□□□□ -1.23
USP8-218ENST00000561330 FYB2Q5VWT5 728 aa7.37□□□□□ -1.23
USP8-218ENST00000561330 ABHD4Q8TB40 342 aa7.37□□□□□ -1.23
USP8-218ENST00000561330 ASIC4Q96FT7 647 aa7.37□□□□□ -1.23
USP8-218ENST00000561330 FCRL3Q96P31 734 aaPredicted RBP7.37□□□□□ -1.23
USP8-218ENST00000561330 LRP2BPQ9P2M1 347 aa7.37□□□□□ -1.23
USP8-218ENST00000561330 TNFRSF10DQ9UBN6 386 aa7.37□□□□□ -1.23
USP8-218ENST00000561330 EMC9Q9Y3B6 208 aa7.37□□□□□ -1.23
USP8-218ENST00000561330 VAMP4O75379 141 aa7.36□□□□□ -1.23
USP8-218ENST00000561330 KIR2DL1P43626 348 aaPredicted RBP7.36□□□□□ -1.23
USP8-218ENST00000561330 KIR2DL2P43627 348 aaPredicted RBP7.36□□□□□ -1.23
USP8-218ENST00000561330 NR0B2Q15466 257 aa7.36□□□□□ -1.23
USP8-218ENST00000561330 SLC14A2Q15849 920 aa7.36□□□□□ -1.23
USP8-218ENST00000561330 KCNMB1Q16558 191 aa7.36□□□□□ -1.23
USP8-218ENST00000561330 DPY19L1Q2PZI1 675 aa7.36□□□□□ -1.23
USP8-218ENST00000561330 NAT16Q8N8M0 369 aa7.36□□□□□ -1.23
USP8-218ENST00000561330 FAM168AQ92567 244 aa7.36□□□□□ -1.23
USP8-218ENST00000561330 HHIPL1Q96JK4 782 aa7.36□□□□□ -1.23
USP8-218ENST00000561330 EPN3Q9H201 632 aa7.36□□□□□ -1.23
USP8-218ENST00000561330 C19orf44Q9H6X5 657 aa7.36□□□□□ -1.23
USP8-218ENST00000561330 USP2O75604 605 aaPredicted RBP7.35□□□□□ -1.23
USP8-218ENST00000561330 KCNH1O95259 989 aa7.35□□□□□ -1.23
USP8-218ENST00000561330 IFNGR1P15260 489 aa7.35□□□□□ -1.23
USP8-218ENST00000561330 TRHRP34981 398 aaPredicted RBP7.35□□□□□ -1.23
USP8-218ENST00000561330 TMEM67Q5HYA8 995 aa7.35□□□□□ -1.23
USP8-218ENST00000561330 SOGA3Q5TF21 947 aa7.35□□□□□ -1.23
USP8-218ENST00000561330 CEP128Q6ZU80 1094 aa7.35□□□□□ -1.23
USP8-218ENST00000561330 ZSWIM9Q86XI8 627 aa7.35□□□□□ -1.23
USP8-218ENST00000561330 LILRA2Q8N149 483 aa7.35□□□□□ -1.23
USP8-218ENST00000561330 ERVK13-1Q9NX77 482 aa7.35□□□□□ -1.23
USP8-218ENST00000561330 STXBP3O00186 592 aa7.34□□□□□ -1.23
USP8-218ENST00000561330 AGRPO00253 132 aa7.34□□□□□ -1.23
USP8-218ENST00000561330 AURKAO14965 403 aa7.34□□□□□ -1.23
USP8-218ENST00000561330 FGF10O15520 208 aaPredicted RBP7.34□□□□□ -1.23
USP8-218ENST00000561330 SLC10A6Q3KNW5 377 aa7.34□□□□□ -1.23
USP8-218ENST00000561330 EEF1DP3Q658K8 133 aa7.34□□□□□ -1.23
USP8-218ENST00000561330 TRIM59Q8IWR1 403 aa7.34□□□□□ -1.23
USP8-218ENST00000561330 MRGPRX3Q96LB0 322 aa7.34□□□□□ -1.23
USP8-218ENST00000561330 DRC1Q96MC2 740 aa7.34□□□□□ -1.23
USP8-218ENST00000561330 SP110Q9HB58 689 aa7.34□□□□□ -1.23
USP8-218ENST00000561330 GPR55Q9Y2T6 319 aaPredicted RBP7.34□□□□□ -1.23
USP8-218ENST00000561330 FADS2P1A8MWK0 482 aa7.33□□□□□ -1.24
USP8-218ENST00000561330 ITGAVP06756 1048 aa7.33□□□□□ -1.24
USP8-218ENST00000561330 GLI1P08151 1106 aa7.33□□□□□ -1.24
USP8-218ENST00000561330 SEPHS1P49903 392 aa7.33□□□□□ -1.24
USP8-218ENST00000561330 RTP1P59025 263 aa7.33□□□□□ -1.24
USP8-218ENST00000561330 RCSD1Q6JBY9 416 aa7.33□□□□□ -1.24
USP8-218ENST00000561330 CYP2R1Q6VVX0 501 aa7.33□□□□□ -1.24
USP8-218ENST00000561330 ZNF227Q86WZ6 799 aa7.33□□□□□ -1.24
USP8-218ENST00000561330 MCMBPQ9BTE3 642 aa7.33□□□□□ -1.24
USP8-218ENST00000561330 LGR4Q9BXB1 951 aa7.33□□□□□ -1.24
USP8-218ENST00000561330 SIRPGQ9P1W8 387 aa7.33□□□□□ -1.24
USP8-218ENST00000561330 BACE2Q9Y5Z0 518 aa7.33□□□□□ -1.24
USP8-218ENST00000561330 CARMIL2Q6F5E8 1435 aa7.33□□□□□ -1.24
USP8-218ENST00000561330 C2orf71A6NGG8 1288 aa7.32□□□□□ -1.24
USP8-218ENST00000561330 SNX17Q15036 470 aa7.32□□□□□ -1.24
USP8-218ENST00000561330 HLA-DQA1Q5Y7H0 255 aa7.32□□□□□ -1.24
USP8-218ENST00000561330 GTF2IRD2BQ6EKJ0 949 aa7.32□□□□□ -1.24
USP8-218ENST00000561330 GTF2IRD2Q86UP8 949 aa7.32□□□□□ -1.24
USP8-218ENST00000561330 KSR1Q8IVT5 923 aa7.32□□□□□ -1.24
USP8-218ENST00000561330 TMEM52Q8NDY8 209 aa7.32□□□□□ -1.24
USP8-218ENST00000561330 ST13P5Q8NFI4 369 aaPredicted RBP7.32□□□□□ -1.24
USP8-218ENST00000561330 PTCHD1Q96NR3 888 aa7.32□□□□□ -1.24
USP8-218ENST00000561330 RNF32Q9H0A6 362 aa7.32□□□□□ -1.24
USP8-218ENST00000561330 GPR160Q9UJ42 338 aa7.32□□□□□ -1.24
USP8-218ENST00000561330 A0A1W2PQ45 241 aaPredicted RBP7.31□□□□□ -1.24
USP8-218ENST00000561330 A0A1W2PQY0 241 aa7.31□□□□□ -1.24
USP8-218ENST00000561330 WTIPA6NIX2 430 aaPredicted RBP7.31□□□□□ -1.24
USP8-218ENST00000561330 CCDC85CA6NKD9 419 aa7.31□□□□□ -1.24
USP8-218ENST00000561330 NRDCO43847 1150 aa7.31□□□□□ -1.24
USP8-218ENST00000561330 TBC1D8O95759 1140 aa7.31□□□□□ -1.24
USP8-218ENST00000561330 TIGD5Q53EQ6 642 aa7.31□□□□□ -1.24
USP8-218ENST00000561330 GALNT18Q6P9A2 607 aa7.31□□□□□ -1.24
USP8-218ENST00000561330 JAMLQ86YT9 394 aa7.31□□□□□ -1.24
USP8-218ENST00000561330 PMFBP1Q8TBY8 1022 aa7.31□□□□□ -1.24
USP8-218ENST00000561330 BTN2A2Q8WVV5 523 aa7.31□□□□□ -1.24
USP8-218ENST00000561330 DNAJC2Q99543 621 aaKnown RBP7.31□□□□□ -1.24
USP8-218ENST00000561330 CCDC113Q9H0I3 377 aa7.31□□□□□ -1.24
USP8-218ENST00000561330 MSRB2Q9Y3D2 182 aa7.31□□□□□ -1.24
USP8-218ENST00000561330 TAF6LQ9Y6J9 622 aa7.31□□□□□ -1.24
USP8-218ENST00000561330 IQCA1LA6NCM1 817 aa7.3□□□□□ -1.24
USP8-218ENST00000561330 NOTOA8MTQ0 251 aa7.3□□□□□ -1.24
USP8-218ENST00000561330 PDPK1O15530 556 aa7.3□□□□□ -1.24
USP8-218ENST00000561330 PAX4O43316 350 aa7.3□□□□□ -1.24
USP8-218ENST00000561330 PSPNO60542 156 aa7.3□□□□□ -1.24
USP8-218ENST00000561330 SCRN1Q12765 414 aa7.3□□□□□ -1.24
USP8-218ENST00000561330 SERINC3Q13530 473 aa7.3□□□□□ -1.24
USP8-218ENST00000561330 SLCO6A1Q86UG4 719 aa7.3□□□□□ -1.24
USP8-218ENST00000561330 NKX2-4Q9H2Z4 354 aa7.3□□□□□ -1.24
USP8-218ENST00000561330 CWC22Q9HCG8 908 aaKnown RBP7.3□□□□□ -1.24
USP8-218ENST00000561330 CYP26B1Q9NR63 512 aa7.3□□□□□ -1.24
USP8-218ENST00000561330 TBX1O43435 398 aa7.29□□□□□ -1.24
USP8-218ENST00000561330 HOXC12P31275 282 aa7.29□□□□□ -1.24
USP8-218ENST00000561330 CEBPAP49715 358 aaPredicted RBP7.29□□□□□ -1.24
USP8-218ENST00000561330 HSF5Q4G112 596 aaPredicted RBP7.29□□□□□ -1.24
USP8-218ENST00000561330 MPZL3Q6UWV2 235 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms