RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 SLC16A2P36021 539 aa15.73■□□□□ 0.11
TPM1-215ENST00000558868 MRPL12P52815 198 aaKnown RBP15.73■□□□□ 0.11
TPM1-215ENST00000558868 IKQ13123 557 aaPredicted RBP15.73■□□□□ 0.11
TPM1-215ENST00000558868 NONOQ15233 471 aaKnown RBP eCLIP15.73■□□□□ 0.11
TPM1-215ENST00000558868 EARS2Q5JPH6 523 aaKnown RBP15.73■□□□□ 0.11
TPM1-215ENST00000558868 SYDE2Q5VT97 1194 aa15.73■□□□□ 0.11
TPM1-215ENST00000558868 TEX2Q8IWB9 1127 aa15.73■□□□□ 0.11
TPM1-215ENST00000558868 REXO1Q8N1G1 1221 aaKnown RBP15.73■□□□□ 0.11
TPM1-215ENST00000558868 CHURC1Q8WUH1 139 aa15.73■□□□□ 0.11
TPM1-215ENST00000558868 FBXO2Q9UK22 296 aaPredicted RBP15.73■□□□□ 0.11
TPM1-215ENST00000558868 A0A1W2PRG0 241 aa15.72■□□□□ 0.11
TPM1-215ENST00000558868 FAM205CA6NFA0 338 aa15.72■□□□□ 0.11
TPM1-215ENST00000558868 PHF20L1A8MW92 1017 aa15.72■□□□□ 0.11
TPM1-215ENST00000558868 TMEM232C9JQI7 657 aa15.72■□□□□ 0.11
TPM1-215ENST00000558868 LAD1O00515 517 aa15.72■□□□□ 0.11
TPM1-215ENST00000558868 PLA2G6O60733 806 aa15.72■□□□□ 0.11
TPM1-215ENST00000558868 PFKFB1P16118 471 aa15.72■□□□□ 0.11
TPM1-215ENST00000558868 SYKP43405 635 aa15.72■□□□□ 0.11
TPM1-215ENST00000558868 NDUFA8P51970 172 aa15.72■□□□□ 0.11
TPM1-215ENST00000558868 ATP2C1P98194 919 aaPredicted RBP15.72■□□□□ 0.11
TPM1-215ENST00000558868 ZNF174Q15697 407 aa15.72■□□□□ 0.11
TPM1-215ENST00000558868 CAMK4Q16566 473 aa15.72■□□□□ 0.11
TPM1-215ENST00000558868 ANGEL2Q5VTE6 544 aaKnown RBP15.72■□□□□ 0.11
TPM1-215ENST00000558868 ARL6IP4Q66PJ3 421 aaKnown RBP15.72■□□□□ 0.11
TPM1-215ENST00000558868 SASS6Q6UVJ0 657 aa15.72■□□□□ 0.11
TPM1-215ENST00000558868 FAM160B2Q86V87 743 aa15.72■□□□□ 0.11
TPM1-215ENST00000558868 CDAN1Q8IWY9 1227 aa15.72■□□□□ 0.11
TPM1-215ENST00000558868 CUL5Q93034 780 aa15.72■□□□□ 0.11
TPM1-215ENST00000558868 SDF4Q9BRK5 362 aa15.72■□□□□ 0.11
TPM1-215ENST00000558868 VCPKMTQ9H867 229 aa15.72■□□□□ 0.11
TPM1-215ENST00000558868 RIC8AQ9NPQ8 531 aa15.72■□□□□ 0.11
TPM1-215ENST00000558868 ADARB2Q9NS39 739 aaKnown RBP15.72■□□□□ 0.11
TPM1-215ENST00000558868 HOOK1Q9UJC3 728 aaKnown RBP15.72■□□□□ 0.11
TPM1-215ENST00000558868 HPSEQ9Y251 543 aa15.72■□□□□ 0.11
TPM1-215ENST00000558868 ZNF202O95125 648 aa15.71■□□□□ 0.11
TPM1-215ENST00000558868 CAVIN2O95810 425 aa15.71■□□□□ 0.11
TPM1-215ENST00000558868 XRCC6P12956 609 aaKnown RBP eCLIP15.71■□□□□ 0.11
TPM1-215ENST00000558868 STAT2P52630 851 aa15.71■□□□□ 0.11
TPM1-215ENST00000558868 CDC37Q16543 378 aaPredicted RBP15.71■□□□□ 0.11
TPM1-215ENST00000558868 QRICH1Q2TAL8 776 aa15.71■□□□□ 0.11
TPM1-215ENST00000558868 SUPT20HL1Q3ZLR7 823 aa15.71■□□□□ 0.11
TPM1-215ENST00000558868 DPY19L2Q6NUT2 758 aa15.71■□□□□ 0.11
TPM1-215ENST00000558868 SHC4Q6S5L8 630 aa15.71■□□□□ 0.11
TPM1-215ENST00000558868 TRPM4Q8TD43 1214 aa15.71■□□□□ 0.11
TPM1-215ENST00000558868 ACER1Q8TDN7 264 aa15.71■□□□□ 0.11
TPM1-215ENST00000558868 COA7Q96BR5 231 aa15.71■□□□□ 0.11
TPM1-215ENST00000558868 CCDC34Q96HJ3 373 aa15.71■□□□□ 0.11
TPM1-215ENST00000558868 PYM1Q9BRP8 204 aaKnown RBP15.71■□□□□ 0.11
TPM1-215ENST00000558868 AMNQ9BXJ7 453 aa15.71■□□□□ 0.11
TPM1-215ENST00000558868 YBX3P16989 372 aaKnown RBP eCLIP15.7■□□□□ 0.1
TPM1-215ENST00000558868 EPS15P42566 896 aa15.7■□□□□ 0.1
TPM1-215ENST00000558868 ECE1P42892 770 aa15.7■□□□□ 0.1
TPM1-215ENST00000558868 HTRA3P83110 453 aa15.7■□□□□ 0.1
TPM1-215ENST00000558868 PTGDRQ13258 359 aa15.7■□□□□ 0.1
TPM1-215ENST00000558868 UVSSAQ2YD98 709 aa15.7■□□□□ 0.1
TPM1-215ENST00000558868 C9orf131Q5VYM1 1079 aa15.7■□□□□ 0.1
TPM1-215ENST00000558868 FBXO11Q86XK2 927 aa15.7■□□□□ 0.1
TPM1-215ENST00000558868 ELOA2Q8IYF1 753 aaPredicted RBP15.7■□□□□ 0.1
TPM1-215ENST00000558868 FEZ1Q99689 392 aa15.7■□□□□ 0.1
TPM1-215ENST00000558868 NAP1L4Q99733 375 aaKnown RBP15.7■□□□□ 0.1
TPM1-215ENST00000558868 FUCA2Q9BTY2 467 aa15.7■□□□□ 0.1
TPM1-215ENST00000558868 RBSNQ9H1K0 784 aa15.7■□□□□ 0.1
TPM1-215ENST00000558868 FEM1BQ9UK73 627 aa15.7■□□□□ 0.1
TPM1-215ENST00000558868 ASTN2O75129 1339 aaPredicted RBP15.69■□□□□ 0.1
TPM1-215ENST00000558868 ZC3H4Q9UPT8 1303 aaKnown RBP15.69■□□□□ 0.1
TPM1-215ENST00000558868 MCM7P33993 719 aa15.69■□□□□ 0.1
TPM1-215ENST00000558868 TYRO3Q06418 890 aa15.69■□□□□ 0.1
TPM1-215ENST00000558868 INF2Q27J81 1249 aa15.69■□□□□ 0.1
TPM1-215ENST00000558868 NOM1Q5C9Z4 860 aaKnown RBP15.69■□□□□ 0.1
TPM1-215ENST00000558868 NBPF12Q5TAG4 269 aaPredicted RBP15.69■□□□□ 0.1
TPM1-215ENST00000558868 NEK8Q86SG6 692 aa15.69■□□□□ 0.1
TPM1-215ENST00000558868 CKAP2LQ8IYA6 745 aa15.69■□□□□ 0.1
TPM1-215ENST00000558868 RASGRP4Q8TDF6 673 aa15.69■□□□□ 0.1
TPM1-215ENST00000558868 LPAR1Q92633 364 aa15.69■□□□□ 0.1
TPM1-215ENST00000558868 CLIC6Q96NY7 704 aa15.69■□□□□ 0.1
TPM1-215ENST00000558868 NUP88Q99567 741 aaPredicted RBP15.69■□□□□ 0.1
TPM1-215ENST00000558868 PSTPIP2Q9H939 334 aa15.69■□□□□ 0.1
TPM1-215ENST00000558868 AS3MTQ9HBK9 375 aa15.69■□□□□ 0.1
TPM1-215ENST00000558868 GGA3Q9NZ52 723 aa15.69■□□□□ 0.1
TPM1-215ENST00000558868 ZNF112Q9UJU3 913 aa15.69■□□□□ 0.1
TPM1-215ENST00000558868 KCNH3Q9ULD8 1083 aa15.69■□□□□ 0.1
TPM1-215ENST00000558868 PCDHA1Q9Y5I3 950 aa15.69■□□□□ 0.1
TPM1-215ENST00000558868 PPP1R11O60927 126 aaPredicted RBP15.68■□□□□ 0.1
TPM1-215ENST00000558868 DDNO94850 711 aaPredicted RBP15.68■□□□□ 0.1
TPM1-215ENST00000558868 LONP1P36776 959 aaKnown RBP15.68■□□□□ 0.1
TPM1-215ENST00000558868 PRPHP41219 470 aa15.68■□□□□ 0.1
TPM1-215ENST00000558868 USP14P54578 494 aa15.68■□□□□ 0.1
TPM1-215ENST00000558868 ZRSR1Q15695 479 aaKnown RBP15.68■□□□□ 0.1
TPM1-215ENST00000558868 FAM83BQ5T0W9 1011 aa15.68■□□□□ 0.1
TPM1-215ENST00000558868 KANK3Q6NY19 840 aa15.68■□□□□ 0.1
TPM1-215ENST00000558868 KIAA1683Q9H0B3 1180 aa15.68■□□□□ 0.1
TPM1-215ENST00000558868 CSRNP2Q9H175 543 aa15.68■□□□□ 0.1
TPM1-215ENST00000558868 PICK1Q9NRD5 415 aa15.68■□□□□ 0.1
TPM1-215ENST00000558868 BIN2Q9UBW5 565 aaPredicted RBP15.68■□□□□ 0.1
TPM1-215ENST00000558868 USP25Q9UHP3 1055 aa15.68■□□□□ 0.1
TPM1-215ENST00000558868 PRR12Q9ULL5 1215 aa15.68■□□□□ 0.1
TPM1-215ENST00000558868 ATAD5Q96QE3 1844 aa15.68■□□□□ 0.1
TPM1-215ENST00000558868 WDR46O15213 610 aaKnown RBP15.67■□□□□ 0.1
TPM1-215ENST00000558868 GRIN3BO60391 1043 aa15.67■□□□□ 0.1
TPM1-215ENST00000558868 JAKMIP3Q5VZ66 844 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms