RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 BECN1Q14457 450 aa7.84□□□□□ -1.15
LINC00517-202ENST00000554257 SIP14410 1827 aa7.84□□□□□ -1.16
LINC00517-202ENST00000554257 RPTORQ8N122 1335 aa7.83□□□□□ -1.16
LINC00517-202ENST00000554257 CCDC196A0A1B0GTZ2 297 aa7.83□□□□□ -1.16
LINC00517-202ENST00000554257 MEIS2O14770 477 aa7.83□□□□□ -1.16
LINC00517-202ENST00000554257 OAZ1P54368 228 aa7.83□□□□□ -1.16
LINC00517-202ENST00000554257 ZYXQ15942 572 aaKnown RBP7.83□□□□□ -1.16
LINC00517-202ENST00000554257 CDC37Q16543 378 aaPredicted RBP7.83□□□□□ -1.16
LINC00517-202ENST00000554257 PPP1R18Q6NYC8 613 aa7.83□□□□□ -1.16
LINC00517-202ENST00000554257 CTCFLQ8NI51 663 aaPredicted RBP7.83□□□□□ -1.16
LINC00517-202ENST00000554257 FGD4Q96M96 766 aa7.83□□□□□ -1.16
LINC00517-202ENST00000554257 SLF1Q9BQI6 1058 aa7.83□□□□□ -1.16
LINC00517-202ENST00000554257 SLC26A6Q9BXS9 759 aa7.83□□□□□ -1.16
LINC00517-202ENST00000554257 CIZ1Q9ULV3 898 aaPredicted RBP7.83□□□□□ -1.16
LINC00517-202ENST00000554257 RIPK3Q9Y572 518 aa7.83□□□□□ -1.16
LINC00517-202ENST00000554257 V9GY48 417 aaPredicted RBP7.83□□□□□ -1.16
LINC00517-202ENST00000554257 PIK3CDO00329 1044 aa7.83□□□□□ -1.16
LINC00517-202ENST00000554257 PEX10O60683 326 aa7.83□□□□□ -1.16
LINC00517-202ENST00000554257 ICAM1P05362 532 aa7.83□□□□□ -1.16
LINC00517-202ENST00000554257 SNAP25P60880 206 aa7.83□□□□□ -1.16
LINC00517-202ENST00000554257 SSRP1Q08945 709 aaKnown RBP7.83□□□□□ -1.16
LINC00517-202ENST00000554257 OXER1Q8TDS5 423 aa7.83□□□□□ -1.16
LINC00517-202ENST00000554257 ASCC2Q9H1I8 757 aaPredicted RBP7.83□□□□□ -1.16
LINC00517-202ENST00000554257 ORC3Q9UBD5 711 aaPredicted RBP7.83□□□□□ -1.16
LINC00517-202ENST00000554257 RBPJLQ9UBG7 517 aa7.83□□□□□ -1.16
LINC00517-202ENST00000554257 hCG_1984214I3L0E3 225 aa7.83□□□□□ -1.16
LINC00517-202ENST00000554257 TOB1P50616 345 aaPredicted RBP7.83□□□□□ -1.16
LINC00517-202ENST00000554257 HSD17B4P51659 736 aa7.83□□□□□ -1.16
LINC00517-202ENST00000554257 GTF2A2P52657 109 aa7.83□□□□□ -1.16
LINC00517-202ENST00000554257 HUNKP57058 714 aa7.83□□□□□ -1.16
LINC00517-202ENST00000554257 KIF23Q02241 960 aaPredicted RBP7.83□□□□□ -1.16
LINC00517-202ENST00000554257 SNAPC2Q13487 334 aa7.83□□□□□ -1.16
LINC00517-202ENST00000554257 ZNF713Q8N859 430 aaPredicted RBP7.83□□□□□ -1.16
LINC00517-202ENST00000554257 GPKOWQ92917 476 aaPredicted RBP eCLIP7.83□□□□□ -1.16
LINC00517-202ENST00000554257 ATG4CQ96DT6 458 aa7.83□□□□□ -1.16
LINC00517-202ENST00000554257 FOXD4L1Q9NU39 408 aa7.83□□□□□ -1.16
LINC00517-202ENST00000554257 MORF4L1Q9UBU8 362 aa7.83□□□□□ -1.16
LINC00517-202ENST00000554257 MORC2Q9Y6X9 1032 aaPredicted RBP7.83□□□□□ -1.16
LINC00517-202ENST00000554257 USP17L15C9J2P7 530 aa7.82□□□□□ -1.16
LINC00517-202ENST00000554257 USP17L13C9JLJ4 530 aa7.82□□□□□ -1.16
LINC00517-202ENST00000554257 USP17L11C9JVI0 530 aa7.82□□□□□ -1.16
LINC00517-202ENST00000554257 USP17L18D6R9N7 530 aa7.82□□□□□ -1.16
LINC00517-202ENST00000554257 USP17L22D6RA61 530 aa7.82□□□□□ -1.16
LINC00517-202ENST00000554257 USP17L17D6RBQ6 530 aa7.82□□□□□ -1.16
LINC00517-202ENST00000554257 USP17L19D6RCP7 530 aa7.82□□□□□ -1.16
LINC00517-202ENST00000554257 USP17L20D6RJB6 530 aa7.82□□□□□ -1.16
LINC00517-202ENST00000554257 CDKL5O76039 1030 aa7.82□□□□□ -1.16
LINC00517-202ENST00000554257 USP17L24Q0WX57 530 aa7.82□□□□□ -1.16
LINC00517-202ENST00000554257 SLC10A4Q96EP9 437 aa7.82□□□□□ -1.16
LINC00517-202ENST00000554257 DDX11Q96FC9 970 aa7.82□□□□□ -1.16
LINC00517-202ENST00000554257 ZNF408Q9H9D4 720 aa7.82□□□□□ -1.16
LINC00517-202ENST00000554257 DHX16O60231 1041 aaKnown RBP7.82□□□□□ -1.16
LINC00517-202ENST00000554257 BCRP11274 1271 aa7.82□□□□□ -1.16
LINC00517-202ENST00000554257 CTGFP29279 349 aa7.82□□□□□ -1.16
LINC00517-202ENST00000554257 KRT40Q6A162 431 aa7.82□□□□□ -1.16
LINC00517-202ENST00000554257 OTUD7BQ6GQQ9 843 aa7.82□□□□□ -1.16
LINC00517-202ENST00000554257 PRPF38AQ8NAV1 312 aaKnown RBP7.82□□□□□ -1.16
LINC00517-202ENST00000554257 MAF1Q9H063 256 aa7.82□□□□□ -1.16
LINC00517-202ENST00000554257 RIC8AQ9NPQ8 531 aa7.82□□□□□ -1.16
LINC00517-202ENST00000554257 STX6O43752 255 aa7.82□□□□□ -1.16
LINC00517-202ENST00000554257 MUM1L1Q5H9M0 696 aa7.82□□□□□ -1.16
LINC00517-202ENST00000554257 IFNL1Q8IU54 200 aa7.82□□□□□ -1.16
LINC00517-202ENST00000554257 AGBL1Q96MI9 1066 aa7.82□□□□□ -1.16
LINC00517-202ENST00000554257 ALG1Q9BT22 464 aa7.82□□□□□ -1.16
LINC00517-202ENST00000554257 VPS54Q9P1Q0 977 aa7.82□□□□□ -1.16
LINC00517-202ENST00000554257 COL20A1Q9P218 1284 aa7.82□□□□□ -1.16
LINC00517-202ENST00000554257 PCDHA6Q9UN73 950 aa7.82□□□□□ -1.16
LINC00517-202ENST00000554257 PCDHA8Q9Y5H6 950 aa7.82□□□□□ -1.16
LINC00517-202ENST00000554257 FAM205CA6NFA0 338 aa7.81□□□□□ -1.16
LINC00517-202ENST00000554257 CETPP11597 493 aa7.81□□□□□ -1.16
LINC00517-202ENST00000554257 ATP2B2Q01814 1243 aa7.81□□□□□ -1.16
LINC00517-202ENST00000554257 COG2Q14746 738 aa7.81□□□□□ -1.16
LINC00517-202ENST00000554257 Q3C1V9 767 aa7.81□□□□□ -1.16
LINC00517-202ENST00000554257 SYNE3Q6ZMZ3 975 aa7.81□□□□□ -1.16
LINC00517-202ENST00000554257 FASTKD5Q7L8L6 764 aaKnown RBP7.81□□□□□ -1.16
LINC00517-202ENST00000554257 TEX2Q8IWB9 1127 aa7.81□□□□□ -1.16
LINC00517-202ENST00000554257 COA7Q96BR5 231 aa7.81□□□□□ -1.16
LINC00517-202ENST00000554257 CHAMP1Q96JM3 812 aa7.81□□□□□ -1.16
LINC00517-202ENST00000554257 MBOAT7Q96N66 472 aa7.81□□□□□ -1.16
LINC00517-202ENST00000554257 RBM27Q9P2N5 1060 aaKnown RBP7.81□□□□□ -1.16
LINC00517-202ENST00000554257 SMC3Q9UQE7 1217 aa7.81□□□□□ -1.16
LINC00517-202ENST00000554257 DNAJC25-GNG10A0A024R161 153 aa7.81□□□□□ -1.16
LINC00517-202ENST00000554257 ZSCAN22P10073 491 aaPredicted RBP7.81□□□□□ -1.16
LINC00517-202ENST00000554257 HERVK_113P62684 666 aa7.81□□□□□ -1.16
LINC00517-202ENST00000554257 DNAJC5GQ8N7S2 189 aa7.81□□□□□ -1.16
LINC00517-202ENST00000554257 C4orf32Q8N8J7 132 aa7.81□□□□□ -1.16
LINC00517-202ENST00000554257 SPRYD3Q8NCJ5 442 aa7.81□□□□□ -1.16
LINC00517-202ENST00000554257 KCNJ14Q9UNX9 436 aa7.81□□□□□ -1.16
LINC00517-202ENST00000554257 PDHXO00330 501 aa7.8□□□□□ -1.16
LINC00517-202ENST00000554257 F13A1P00488 732 aa7.8□□□□□ -1.16
LINC00517-202ENST00000554257 FDX1P10109 184 aa7.8□□□□□ -1.16
LINC00517-202ENST00000554257 FGD1P98174 961 aa7.8□□□□□ -1.16
LINC00517-202ENST00000554257 CCDC96Q2M329 555 aa7.8□□□□□ -1.16
LINC00517-202ENST00000554257 CCDC82Q8N4S0 544 aa7.8□□□□□ -1.16
LINC00517-202ENST00000554257 CHURC1Q8WUH1 139 aa7.8□□□□□ -1.16
LINC00517-202ENST00000554257 CHMP4CQ96CF2 233 aa7.8□□□□□ -1.16
LINC00517-202ENST00000554257 RRP36Q96EU6 259 aaKnown RBP7.8□□□□□ -1.16
LINC00517-202ENST00000554257 FOXP1Q9H334 677 aaPredicted RBP7.8□□□□□ -1.16
LINC00517-202ENST00000554257 CCL15-CCL14A0A0B4J2E2 113 aa7.8□□□□□ -1.16
LINC00517-202ENST00000554257 CCL15Q16663 113 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms