RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 SLIT2O94813 1529 aa9.45□□□□□ -0.9
CHPT1-203ENST00000546873 KNDC1Q76NI1 1749 aa9.45□□□□□ -0.9
CHPT1-203ENST00000546873 SLC6A19Q695T7 634 aa9.44□□□□□ -0.9
CHPT1-203ENST00000546873 C22orf34Q6ZV56 151 aa9.44□□□□□ -0.9
CHPT1-203ENST00000546873 FBXO33Q7Z6M2 555 aa9.44□□□□□ -0.9
CHPT1-203ENST00000546873 CCDC84Q86UT8 332 aaPredicted RBP9.44□□□□□ -0.9
CHPT1-203ENST00000546873 RELL1Q8IUW5 271 aa9.44□□□□□ -0.9
CHPT1-203ENST00000546873 DLC1Q96QB1 1528 aa9.44□□□□□ -0.9
CHPT1-203ENST00000546873 NRXN3Q9Y4C0 1643 aa9.44□□□□□ -0.9
CHPT1-203ENST00000546873 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.44□□□□□ -0.9
CHPT1-203ENST00000546873 MARF1Q9Y4F3 1742 aaKnown RBP9.43□□□□□ -0.9
CHPT1-203ENST00000546873 PITPNM2Q9BZ72 1349 aa9.43□□□□□ -0.9
CHPT1-203ENST00000546873 PAPLNO95428 1278 aa9.43□□□□□ -0.9
CHPT1-203ENST00000546873 PWP1Q13610 501 aa9.43□□□□□ -0.9
CHPT1-203ENST00000546873 CDKAL1Q5VV42 579 aa9.43□□□□□ -0.9
CHPT1-203ENST00000546873 MRPL41Q8IXM3 137 aaKnown RBP9.43□□□□□ -0.9
CHPT1-203ENST00000546873 LRRN4CLQ8ND94 238 aa9.43□□□□□ -0.9
CHPT1-203ENST00000546873 KRTAP4-12Q9BQ66 201 aa9.43□□□□□ -0.9
CHPT1-203ENST00000546873 PRKRIP1Q9H875 184 aaPredicted RBP9.43□□□□□ -0.9
CHPT1-203ENST00000546873 LMCD1Q9NZU5 365 aa9.43□□□□□ -0.9
CHPT1-203ENST00000546873 ADAMTS6Q9UKP5 1117 aa9.43□□□□□ -0.9
CHPT1-203ENST00000546873 TLR6Q9Y2C9 796 aa9.43□□□□□ -0.9
CHPT1-203ENST00000546873 YTHDC2Q9H6S0 1430 aaKnown RBP9.42□□□□□ -0.9
CHPT1-203ENST00000546873 CBX7O95931 251 aa9.42□□□□□ -0.9
CHPT1-203ENST00000546873 C1QTNF8P60827 252 aa9.42□□□□□ -0.9
CHPT1-203ENST00000546873 EZH2Q15910 746 aaKnown RBP9.42□□□□□ -0.9
CHPT1-203ENST00000546873 PHC3Q8NDX5 983 aa9.42□□□□□ -0.9
CHPT1-203ENST00000546873 TMEM87BQ96K49 555 aa9.42□□□□□ -0.9
CHPT1-203ENST00000546873 ADAM30Q9UKF2 790 aa9.42□□□□□ -0.9
CHPT1-203ENST00000546873 CAMTA1Q9Y6Y1 1673 aa9.42□□□□□ -0.9
CHPT1-203ENST00000546873 PXDNQ92626 1479 aa9.41□□□□□ -0.9
CHPT1-203ENST00000546873 EVC2Q86UK5 1308 aa9.41□□□□□ -0.9
CHPT1-203ENST00000546873 ZNF865P0CJ78 1059 aaPredicted RBP9.41□□□□□ -0.9
CHPT1-203ENST00000546873 ETV3P41162 512 aa9.41□□□□□ -0.9
CHPT1-203ENST00000546873 KIR3DL1P43629 444 aa9.41□□□□□ -0.9
CHPT1-203ENST00000546873 RALBP1Q15311 655 aa9.41□□□□□ -0.9
CHPT1-203ENST00000546873 HSPA12BQ96MM6 686 aa9.41□□□□□ -0.9
CHPT1-203ENST00000546873 PODXL2Q9NZ53 605 aa9.41□□□□□ -0.9
CHPT1-203ENST00000546873 CCDC9Q9Y3X0 531 aaKnown RBP9.41□□□□□ -0.9
CHPT1-203ENST00000546873 NINLQ9Y2I6 1382 aa9.4□□□□□ -0.9
CHPT1-203ENST00000546873 CTSHP09668 335 aa9.4□□□□□ -0.9
CHPT1-203ENST00000546873 GBP2P32456 591 aaPredicted RBP9.4□□□□□ -0.9
CHPT1-203ENST00000546873 LMNB2Q03252 620 aa9.4□□□□□ -0.9
CHPT1-203ENST00000546873 OGFOD2Q6N063 350 aa9.4□□□□□ -0.9
CHPT1-203ENST00000546873 CDH24Q86UP0 819 aa9.4□□□□□ -0.9
CHPT1-203ENST00000546873 FAM168AQ92567 244 aa9.4□□□□□ -0.9
CHPT1-203ENST00000546873 TJP2Q9UDY2 1190 aa9.4□□□□□ -0.9
CHPT1-203ENST00000546873 LRPPRCP42704 1394 aaKnown RBP9.39□□□□□ -0.91
CHPT1-203ENST00000546873 USP32Q8NFA0 1604 aa9.39□□□□□ -0.91
CHPT1-203ENST00000546873 MYBBP1AQ9BQG0 1328 aaKnown RBP9.39□□□□□ -0.91
CHPT1-203ENST00000546873 PLCG1P19174 1290 aa9.39□□□□□ -0.91
CHPT1-203ENST00000546873 CAMK2GQ13555 558 aaPredicted RBP9.39□□□□□ -0.91
CHPT1-203ENST00000546873 VPS72Q15906 364 aa9.39□□□□□ -0.91
CHPT1-203ENST00000546873 MCATQ8IVS2 390 aaKnown RBP9.39□□□□□ -0.91
CHPT1-203ENST00000546873 RIN3Q8TB24 985 aa9.39□□□□□ -0.91
CHPT1-203ENST00000546873 DPH2Q9BQC3 489 aaPredicted RBP9.39□□□□□ -0.91
CHPT1-203ENST00000546873 CAPN6Q9Y6Q1 641 aa9.39□□□□□ -0.91
CHPT1-203ENST00000546873 TULP4Q9NRJ4 1543 aa9.39□□□□□ -0.91
CHPT1-203ENST00000546873 PRR33A8MZF0 331 aa9.38□□□□□ -0.91
CHPT1-203ENST00000546873 H3BS24 57 aa9.38□□□□□ -0.91
CHPT1-203ENST00000546873 YARSP54577 528 aaKnown RBP9.38□□□□□ -0.91
CHPT1-203ENST00000546873 TMEM132EQ6IEE7 984 aa9.38□□□□□ -0.91
CHPT1-203ENST00000546873 THAP5Q7Z6K1 395 aa9.38□□□□□ -0.91
CHPT1-203ENST00000546873 CCDC120Q96HB5 630 aa9.38□□□□□ -0.91
CHPT1-203ENST00000546873 RSRP1Q9BUV0 290 aa9.38□□□□□ -0.91
CHPT1-203ENST00000546873 CARS2Q9HA77 564 aaKnown RBP9.38□□□□□ -0.91
CHPT1-203ENST00000546873 PRDM7Q9NQW5 492 aa9.38□□□□□ -0.91
CHPT1-203ENST00000546873 POGKQ9P215 609 aa9.38□□□□□ -0.91
CHPT1-203ENST00000546873 PPP1R1BQ9UD71 204 aaPredicted RBP9.38□□□□□ -0.91
CHPT1-203ENST00000546873 KNSTRNQ9Y448 316 aa9.38□□□□□ -0.91
CHPT1-203ENST00000546873 BRD4O60885 1362 aaPredicted RBP9.37□□□□□ -0.91
CHPT1-203ENST00000546873 PARD3Q8TEW0 1356 aa9.37□□□□□ -0.91
CHPT1-203ENST00000546873 NPHP3Q7Z494 1330 aa9.37□□□□□ -0.91
CHPT1-203ENST00000546873 PF4P02776 101 aa9.37□□□□□ -0.91
CHPT1-203ENST00000546873 SNAP47Q5SQN1 464 aa9.37□□□□□ -0.91
CHPT1-203ENST00000546873 LCE3BQ5TA77 95 aa9.37□□□□□ -0.91
CHPT1-203ENST00000546873 POU5F2Q8N7G0 328 aa9.37□□□□□ -0.91
CHPT1-203ENST00000546873 FLAD1Q8NFF5 587 aa9.37□□□□□ -0.91
CHPT1-203ENST00000546873 GATAD2BQ8WXI9 593 aa9.37□□□□□ -0.91
CHPT1-203ENST00000546873 TMEM74Q96NL1 305 aa9.37□□□□□ -0.91
CHPT1-203ENST00000546873 PUS7Q96PZ0 661 aaKnown RBP9.37□□□□□ -0.91
CHPT1-203ENST00000546873 CAMKK2Q96RR4 588 aa9.37□□□□□ -0.91
CHPT1-203ENST00000546873 PANK3Q9H999 370 aa9.37□□□□□ -0.91
CHPT1-203ENST00000546873 ATP13A1Q9HD20 1204 aa9.37□□□□□ -0.91
CHPT1-203ENST00000546873 SEMA3GQ9NS98 782 aa9.37□□□□□ -0.91
CHPT1-203ENST00000546873 DISP2A7MBM2 1401 aa9.37□□□□□ -0.91
CHPT1-203ENST00000546873 TECPR2O15040 1411 aa9.37□□□□□ -0.91
CHPT1-203ENST00000546873 ROBO2Q9HCK4 1378 aa9.37□□□□□ -0.91
CHPT1-203ENST00000546873 RGPD1P0DJD0 1748 aa9.36□□□□□ -0.91
CHPT1-203ENST00000546873 TNS1Q9HBL0 1735 aaKnown RBP9.36□□□□□ -0.91
CHPT1-203ENST00000546873 AFMP43652 599 aa9.36□□□□□ -0.91
CHPT1-203ENST00000546873 BNC2Q6ZN30 1099 aaPredicted RBP9.36□□□□□ -0.91
CHPT1-203ENST00000546873 FAM13CQ8NE31 585 aa9.36□□□□□ -0.91
CHPT1-203ENST00000546873 PIWIL2Q8TC59 973 aaKnown RBP9.36□□□□□ -0.91
CHPT1-203ENST00000546873 ZSWIM5Q9P217 1185 aa9.36□□□□□ -0.91
CHPT1-203ENST00000546873 STK26Q9P289 416 aa9.36□□□□□ -0.91
CHPT1-203ENST00000546873 NPC1L1Q9UHC9 1359 aa9.36□□□□□ -0.91
CHPT1-203ENST00000546873 CNTNAP4Q9C0A0 1308 aa9.35□□□□□ -0.91
CHPT1-203ENST00000546873 F6X3S4 739 aa9.35□□□□□ -0.91
CHPT1-203ENST00000546873 CILPO75339 1184 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms