RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 PARK7Q99497 189 aaKnown RBP20.41■□□□□ 0.86
CTSB-222ENST00000531551 PAGR1Q9BTK6 254 aa20.41■□□□□ 0.86
CTSB-222ENST00000531551 RANBP17Q9H2T7 1088 aaKnown RBP20.41■□□□□ 0.86
CTSB-222ENST00000531551 MYPNQ86TC9 1320 aa20.41■□□□□ 0.86
CTSB-222ENST00000531551 PNMA6FA0A0J9YX94 578 aa20.41■□□□□ 0.86
CTSB-222ENST00000531551 FDPSP14324 419 aaKnown RBP20.41■□□□□ 0.86
CTSB-222ENST00000531551 PLS1Q14651 629 aa20.41■□□□□ 0.86
CTSB-222ENST00000531551 TAF1CQ15572 869 aaPredicted RBP20.41■□□□□ 0.86
CTSB-222ENST00000531551 HEATR3Q7Z4Q2 680 aa20.41■□□□□ 0.86
CTSB-222ENST00000531551 SLC38A10Q9HBR0 1119 aa20.41■□□□□ 0.86
CTSB-222ENST00000531551 RAVER2Q9HCJ3 691 aaKnown RBP20.41■□□□□ 0.86
CTSB-222ENST00000531551 RBM27Q9P2N5 1060 aaKnown RBP20.41■□□□□ 0.86
CTSB-222ENST00000531551 PEX10O60683 326 aa20.4■□□□□ 0.86
CTSB-222ENST00000531551 USH1GQ495M9 461 aa20.4■□□□□ 0.86
CTSB-222ENST00000531551 GPKOWQ92917 476 aaPredicted RBP eCLIP20.4■□□□□ 0.86
CTSB-222ENST00000531551 MTMR8Q96EF0 704 aa20.4■□□□□ 0.86
CTSB-222ENST00000531551 AIFM3Q96NN9 605 aa20.4■□□□□ 0.86
CTSB-222ENST00000531551 STK36Q9NRP7 1315 aa20.4■□□□□ 0.86
CTSB-222ENST00000531551 TAL1P17542 331 aaPredicted RBP20.39■□□□□ 0.86
CTSB-222ENST00000531551 PKN1Q16512 942 aa20.39■□□□□ 0.86
CTSB-222ENST00000531551 PFKFB3Q16875 520 aaPredicted RBP20.39■□□□□ 0.86
CTSB-222ENST00000531551 FBXO11Q86XK2 927 aa20.39■□□□□ 0.86
CTSB-222ENST00000531551 ALG1Q9BT22 464 aa20.39■□□□□ 0.86
CTSB-222ENST00000531551 FDX1P10109 184 aa20.39■□□□□ 0.85
CTSB-222ENST00000531551 SCG2P13521 617 aa20.39■□□□□ 0.85
CTSB-222ENST00000531551 MAP2K2P36507 400 aa20.39■□□□□ 0.85
CTSB-222ENST00000531551 WASF1Q92558 559 aa20.39■□□□□ 0.85
CTSB-222ENST00000531551 COA7Q96BR5 231 aa20.39■□□□□ 0.85
CTSB-222ENST00000531551 AGBL1Q96MI9 1066 aa20.39■□□□□ 0.85
CTSB-222ENST00000531551 IPO9Q96P70 1041 aaKnown RBP20.39■□□□□ 0.85
CTSB-222ENST00000531551 ADAMTS5Q9UNA0 930 aa20.39■□□□□ 0.85
CTSB-222ENST00000531551 PPP1R11O60927 126 aaPredicted RBP20.38■□□□□ 0.85
CTSB-222ENST00000531551 TMEM132BQ14DG7 1078 aa20.38■□□□□ 0.85
CTSB-222ENST00000531551 LBX2Q6XYB7 198 aa20.38■□□□□ 0.85
CTSB-222ENST00000531551 REM2Q8IYK8 340 aaPredicted RBP20.38■□□□□ 0.85
CTSB-222ENST00000531551 AMNQ9BXJ7 453 aa20.38■□□□□ 0.85
CTSB-222ENST00000531551 ZCCHC17Q9NP64 241 aaKnown RBP20.38■□□□□ 0.85
CTSB-222ENST00000531551 CCPG1Q9ULG6 757 aa20.38■□□□□ 0.85
CTSB-222ENST00000531551 KIF3AQ9Y496 699 aa20.38■□□□□ 0.85
CTSB-222ENST00000531551 WWC2Q6AWC2 1192 aa20.37■□□□□ 0.85
CTSB-222ENST00000531551 VPS54Q9P1Q0 977 aa20.37■□□□□ 0.85
CTSB-222ENST00000531551 BTBD7Q9P203 1132 aa20.37■□□□□ 0.85
CTSB-222ENST00000531551 PCDHA1Q9Y5I3 950 aa20.37■□□□□ 0.85
CTSB-222ENST00000531551 ICAM1P05362 532 aa20.37■□□□□ 0.85
CTSB-222ENST00000531551 POTEEQ6S8J3 1075 aa20.37■□□□□ 0.85
CTSB-222ENST00000531551 ANKRD13CQ8N6S4 541 aa20.37■□□□□ 0.85
CTSB-222ENST00000531551 MB21D1Q8N884 522 aa20.37■□□□□ 0.85
CTSB-222ENST00000531551 REPS2Q8NFH8 660 aa20.37■□□□□ 0.85
CTSB-222ENST00000531551 ZFYVE28Q9HCC9 887 aa20.37■□□□□ 0.85
CTSB-222ENST00000531551 HOMER2Q9NSB8 354 aa20.37■□□□□ 0.85
CTSB-222ENST00000531551 RBPJLQ9UBG7 517 aa20.37■□□□□ 0.85
CTSB-222ENST00000531551 ZNF536O15090 1300 aa20.36■□□□□ 0.85
CTSB-222ENST00000531551 BAZ2BQ9UIF8 2168 aaKnown RBP20.36■□□□□ 0.85
CTSB-222ENST00000531551 ALAS1P13196 640 aa20.36■□□□□ 0.85
CTSB-222ENST00000531551 NAPAP54920 295 aa20.36■□□□□ 0.85
CTSB-222ENST00000531551 SNRNP48Q6IEG0 339 aaKnown RBP20.36■□□□□ 0.85
CTSB-222ENST00000531551 TXNRD2Q9NNW7 524 aa20.36■□□□□ 0.85
CTSB-222ENST00000531551 GJB4Q9NTQ9 266 aa20.36■□□□□ 0.85
CTSB-222ENST00000531551 CPA4Q9UI42 421 aa20.36■□□□□ 0.85
CTSB-222ENST00000531551 ALDH1A1P00352 501 aa20.35■□□□□ 0.85
CTSB-222ENST00000531551 STAT3P40763 770 aa20.35■□□□□ 0.85
CTSB-222ENST00000531551 GCLCP48506 637 aaPredicted RBP20.35■□□□□ 0.85
CTSB-222ENST00000531551 GTF3C2Q8WUA4 911 aaPredicted RBP20.35■□□□□ 0.85
CTSB-222ENST00000531551 ZNF214Q9UL59 606 aaPredicted RBP20.35■□□□□ 0.85
CTSB-222ENST00000531551 RABGAP1Q9Y3P9 1069 aa20.35■□□□□ 0.85
CTSB-222ENST00000531551 PCNTO95613 3336 aa20.35■□□□□ 0.85
CTSB-222ENST00000531551 CNMDO75829 334 aa20.35■□□□□ 0.85
CTSB-222ENST00000531551 XBP1P17861 261 aa20.35■□□□□ 0.85
CTSB-222ENST00000531551 GUCY1B3Q02153 619 aa20.35■□□□□ 0.85
CTSB-222ENST00000531551 CRHR2Q13324 411 aa20.35■□□□□ 0.85
CTSB-222ENST00000531551 TRIM29Q14134 588 aa20.35■□□□□ 0.85
CTSB-222ENST00000531551 LARP1BQ659C4 914 aaKnown RBP20.35■□□□□ 0.85
CTSB-222ENST00000531551 C8orf76Q96K31 380 aa20.35■□□□□ 0.85
CTSB-222ENST00000531551 TEX13BQ9BXU2 312 aa20.35■□□□□ 0.85
CTSB-222ENST00000531551 BARHL2Q9NY43 387 aa20.35■□□□□ 0.85
CTSB-222ENST00000531551 STXBP3O00186 592 aa20.34■□□□□ 0.85
CTSB-222ENST00000531551 OAZ1P54368 228 aa20.34■□□□□ 0.85
CTSB-222ENST00000531551 Q3C1V9 767 aa20.34■□□□□ 0.85
CTSB-222ENST00000531551 SPATC1LQ9H0A9 340 aa20.34■□□□□ 0.85
CTSB-222ENST00000531551 RIPK3Q9Y572 518 aa20.34■□□□□ 0.85
CTSB-222ENST00000531551 CA12O43570 354 aa20.33■□□□□ 0.85
CTSB-222ENST00000531551 ERVK-9P63128 1117 aa20.33■□□□□ 0.85
CTSB-222ENST00000531551 ERVK-24P63145 666 aa20.33■□□□□ 0.85
CTSB-222ENST00000531551 TRAF1Q13077 416 aa20.33■□□□□ 0.85
CTSB-222ENST00000531551 TYW1BQ6NUM6 668 aa20.33■□□□□ 0.85
CTSB-222ENST00000531551 GPRC5AQ8NFJ5 357 aa20.33■□□□□ 0.85
CTSB-222ENST00000531551 KCNJ14Q9UNX9 436 aa20.33■□□□□ 0.85
CTSB-222ENST00000531551 H3BQV1 296 aa20.33■□□□□ 0.84
CTSB-222ENST00000531551 TRPA1O75762 1119 aa20.33■□□□□ 0.84
CTSB-222ENST00000531551 ECM2O94769 699 aaPredicted RBP20.33■□□□□ 0.84
CTSB-222ENST00000531551 NLRP5P59047 1200 aa20.33■□□□□ 0.84
CTSB-222ENST00000531551 IFFO2Q5TF58 517 aa20.33■□□□□ 0.84
CTSB-222ENST00000531551 NCAPG2Q86XI2 1143 aa20.33■□□□□ 0.84
CTSB-222ENST00000531551 CCDC12Q8WUD4 166 aaPredicted RBP20.33■□□□□ 0.84
CTSB-222ENST00000531551 TRERF1Q96PN7 1200 aa20.33■□□□□ 0.84
CTSB-222ENST00000531551 CWC22Q9HCG8 908 aaKnown RBP20.33■□□□□ 0.84
CTSB-222ENST00000531551 hCG_1984214I3L0E3 225 aa20.32■□□□□ 0.84
CTSB-222ENST00000531551 ATP2A1O14983 1001 aa20.32■□□□□ 0.84
CTSB-222ENST00000531551 TLR2O60603 784 aa20.32■□□□□ 0.84
CTSB-222ENST00000531551 WDR78Q5VTH9 848 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms