RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 FFAR3O14843 346 aa6.19□□□□□ -1.42
HDAC2-208ENST00000520746 CLEC3AO75596 197 aa6.19□□□□□ -1.42
HDAC2-208ENST00000520746 IGFBP6P24592 240 aaPredicted RBP6.19□□□□□ -1.42
HDAC2-208ENST00000520746 CTSKP43235 329 aa6.19□□□□□ -1.42
HDAC2-208ENST00000520746 PLEKHN1Q494U1 663 aaPredicted RBP6.19□□□□□ -1.42
HDAC2-208ENST00000520746 SPATS1Q496A3 300 aa6.19□□□□□ -1.42
HDAC2-208ENST00000520746 FBXL19Q6PCT2 694 aa6.19□□□□□ -1.42
HDAC2-208ENST00000520746 BDH2Q9BUT1 245 aa6.19□□□□□ -1.42
HDAC2-208ENST00000520746 CDADC1Q9BWV3 514 aa6.19□□□□□ -1.42
HDAC2-208ENST00000520746 KBTBD4Q9NVX7 518 aa6.19□□□□□ -1.42
HDAC2-208ENST00000520746 IMPACTQ9P2X3 320 aa6.19□□□□□ -1.42
HDAC2-208ENST00000520746 ENDOUP21128 410 aaKnown RBP6.18□□□□□ -1.42
HDAC2-208ENST00000520746 BMP8BP34820 402 aa6.18□□□□□ -1.42
HDAC2-208ENST00000520746 LIMS1P48059 325 aa6.18□□□□□ -1.42
HDAC2-208ENST00000520746 ATG4CQ96DT6 458 aa6.18□□□□□ -1.42
HDAC2-208ENST00000520746 JMJD8Q96S16 334 aa6.18□□□□□ -1.42
HDAC2-208ENST00000520746 BCL11AQ9H165 835 aa6.18□□□□□ -1.42
HDAC2-208ENST00000520746 MRS2Q9HD23 443 aa6.18□□□□□ -1.42
HDAC2-208ENST00000520746 KCNQ5Q9NR82 932 aa6.18□□□□□ -1.42
HDAC2-208ENST00000520746 AP5S1Q9NUS5 200 aa6.18□□□□□ -1.42
HDAC2-208ENST00000520746 GFOD1Q9NXC2 390 aa6.18□□□□□ -1.42
HDAC2-208ENST00000520746 IRS2Q9Y4H2 1338 aa6.18□□□□□ -1.42
HDAC2-208ENST00000520746 ROBO2Q9HCK4 1378 aa6.18□□□□□ -1.42
HDAC2-208ENST00000520746 PRICKLE3O43900 615 aaPredicted RBP6.17□□□□□ -1.42
HDAC2-208ENST00000520746 SORBS3O60504 671 aa6.17□□□□□ -1.42
HDAC2-208ENST00000520746 ZNF200P98182 395 aaPredicted RBP6.17□□□□□ -1.42
HDAC2-208ENST00000520746 CAP1Q01518 475 aa6.17□□□□□ -1.42
HDAC2-208ENST00000520746 PLP2Q04941 152 aa6.17□□□□□ -1.42
HDAC2-208ENST00000520746 RTP5Q14D33 572 aa6.17□□□□□ -1.42
HDAC2-208ENST00000520746 TMEM52Q8NDY8 209 aa6.17□□□□□ -1.42
HDAC2-208ENST00000520746 ZNF428Q96B54 188 aa6.17□□□□□ -1.42
HDAC2-208ENST00000520746 COPRSQ9NQ92 184 aa6.17□□□□□ -1.42
HDAC2-208ENST00000520746 GREM1O60565 184 aa6.16□□□□□ -1.42
HDAC2-208ENST00000520746 VAV1P15498 845 aa6.16□□□□□ -1.42
HDAC2-208ENST00000520746 CCNFP41002 786 aa6.16□□□□□ -1.42
HDAC2-208ENST00000520746 CRKP46108 304 aa6.16□□□□□ -1.42
HDAC2-208ENST00000520746 KCNC1P48547 511 aa6.16□□□□□ -1.42
HDAC2-208ENST00000520746 MAPKAPK2P49137 400 aa6.16□□□□□ -1.42
HDAC2-208ENST00000520746 RBM25P49756 843 aaKnown RBP6.16□□□□□ -1.42
HDAC2-208ENST00000520746 SLURP1P55000 103 aa6.16□□□□□ -1.42
HDAC2-208ENST00000520746 ZXDCQ2QGD7 858 aaPredicted RBP6.16□□□□□ -1.42
HDAC2-208ENST00000520746 KRTAP5-3Q6L8H2 238 aa6.16□□□□□ -1.42
HDAC2-208ENST00000520746 ZC3H14Q6PJT7 736 aaKnown RBP6.16□□□□□ -1.42
HDAC2-208ENST00000520746 CRTC3Q6UUV7 619 aa6.16□□□□□ -1.42
HDAC2-208ENST00000520746 NLRC3Q7RTR2 1065 aa6.16□□□□□ -1.42
HDAC2-208ENST00000520746 ERMP1Q7Z2K6 904 aa6.16□□□□□ -1.42
HDAC2-208ENST00000520746 TMEM192Q8IY95 271 aa6.16□□□□□ -1.42
HDAC2-208ENST00000520746 MKRN2Q9H000 416 aaKnown RBP6.16□□□□□ -1.42
HDAC2-208ENST00000520746 TMPRSS5Q9H3S3 457 aa6.16□□□□□ -1.42
HDAC2-208ENST00000520746 EHMT1Q9H9B1 1298 aa6.16□□□□□ -1.42
HDAC2-208ENST00000520746 VTI1BQ9UEU0 232 aa6.16□□□□□ -1.42
HDAC2-208ENST00000520746 MSL3P1P0C860 447 aa6.15□□□□□ -1.42
HDAC2-208ENST00000520746 MVKQ03426 396 aa6.15□□□□□ -1.42
HDAC2-208ENST00000520746 NR1I3Q14994 352 aa6.15□□□□□ -1.42
HDAC2-208ENST00000520746 VWA3BQ502W6 1294 aa6.15□□□□□ -1.42
HDAC2-208ENST00000520746 RTP2Q5QGT7 225 aa6.15□□□□□ -1.42
HDAC2-208ENST00000520746 EAF1Q96JC9 268 aaPredicted RBP6.15□□□□□ -1.42
HDAC2-208ENST00000520746 SUPT16HQ9Y5B9 1047 aaKnown RBP6.15□□□□□ -1.42
HDAC2-208ENST00000520746 PCDHB12Q9Y5F1 795 aa6.15□□□□□ -1.42
HDAC2-208ENST00000520746 UNCXA6NJT0 531 aa6.14□□□□□ -1.43
HDAC2-208ENST00000520746 PFKLP17858 780 aa6.14□□□□□ -1.43
HDAC2-208ENST00000520746 FBLN1P23142 703 aa6.14□□□□□ -1.43
HDAC2-208ENST00000520746 ITGAEP38570 1179 aa6.14□□□□□ -1.43
HDAC2-208ENST00000520746 MRRFQ96E11 262 aaKnown RBP6.14□□□□□ -1.43
HDAC2-208ENST00000520746 SLC6A18Q96N87 628 aa6.14□□□□□ -1.43
HDAC2-208ENST00000520746 ANTXR1Q9H6X2 564 aa6.14□□□□□ -1.43
HDAC2-208ENST00000520746 FBXL21Q9UKT6 434 aa6.14□□□□□ -1.43
HDAC2-208ENST00000520746 PLA2G2DQ9UNK4 145 aa6.14□□□□□ -1.43
HDAC2-208ENST00000520746 PLA2G1BP04054 148 aaKnown RBP6.13□□□□□ -1.43
HDAC2-208ENST00000520746 NME1P15531 152 aaKnown RBP6.13□□□□□ -1.43
HDAC2-208ENST00000520746 EIF4A3P38919 411 aaKnown RBP6.13□□□□□ -1.43
HDAC2-208ENST00000520746 CLCQ05315 142 aa6.13□□□□□ -1.43
HDAC2-208ENST00000520746 AUHQ13825 339 aaKnown RBP6.13□□□□□ -1.43
HDAC2-208ENST00000520746 ZFYVE27Q5T4F4 411 aa6.13□□□□□ -1.43
HDAC2-208ENST00000520746 HHIPL2Q6UWX4 724 aa6.13□□□□□ -1.43
HDAC2-208ENST00000520746 ADGRG2Q8IZP9 1017 aa6.13□□□□□ -1.43
HDAC2-208ENST00000520746 NLGN1Q8N2Q7 840 aa6.13□□□□□ -1.43
HDAC2-208ENST00000520746 PRR13Q9NZ81 148 aa6.13□□□□□ -1.43
HDAC2-208ENST00000520746 HCFC2Q9Y5Z7 792 aa6.13□□□□□ -1.43
HDAC2-208ENST00000520746 A0A1B0GTL3 188 aa6.12□□□□□ -1.43
HDAC2-208ENST00000520746 TNFRSF10CO14798 259 aa6.12□□□□□ -1.43
HDAC2-208ENST00000520746 DBHP09172 617 aa6.12□□□□□ -1.43
HDAC2-208ENST00000520746 INSRRP14616 1297 aa6.12□□□□□ -1.43
HDAC2-208ENST00000520746 MRPL58Q14197 206 aaKnown RBP6.12□□□□□ -1.43
HDAC2-208ENST00000520746 LIPIQ6XZB0 460 aa6.12□□□□□ -1.43
HDAC2-208ENST00000520746 GK5Q6ZS86 529 aa6.12□□□□□ -1.43
HDAC2-208ENST00000520746 LSRQ86X29 649 aaPredicted RBP6.12□□□□□ -1.43
HDAC2-208ENST00000520746 FNIP1Q8TF40 1166 aa6.12□□□□□ -1.43
HDAC2-208ENST00000520746 SUSD2Q9UGT4 822 aa6.12□□□□□ -1.43
HDAC2-208ENST00000520746 MEIS3P2A8K0S8 358 aa6.11□□□□□ -1.43
HDAC2-208ENST00000520746 SRGAP3O43295 1099 aa6.11□□□□□ -1.43
HDAC2-208ENST00000520746 GSNP06396 782 aa6.11□□□□□ -1.43
HDAC2-208ENST00000520746 PUM1Q14671 1186 aaKnown RBP eCLIP6.11□□□□□ -1.43
HDAC2-208ENST00000520746 TARBP2Q15633 366 aaKnown RBP6.11□□□□□ -1.43
HDAC2-208ENST00000520746 SEZ6Q53EL9 994 aa6.11□□□□□ -1.43
HDAC2-208ENST00000520746 PAQR3Q6TCH7 311 aa6.11□□□□□ -1.43
HDAC2-208ENST00000520746 NAT16Q8N8M0 369 aa6.11□□□□□ -1.43
HDAC2-208ENST00000520746 ZNF296Q8WUU4 475 aaPredicted RBP6.11□□□□□ -1.43
HDAC2-208ENST00000520746 SPATA25Q9BR10 227 aa6.11□□□□□ -1.43
HDAC2-208ENST00000520746 SLC12A9Q9BXP2 914 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms