RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 ZNF713Q8N859 430 aaPredicted RBP10.54□□□□□ -0.72
NR1I3-230ENST00000511944 TMEM87AQ8NBN3 555 aa10.54□□□□□ -0.72
NR1I3-230ENST00000511944 SLC44A5Q8NCS7 719 aa10.54□□□□□ -0.72
NR1I3-230ENST00000511944 FBXO18Q8NFZ0 1043 aa10.54□□□□□ -0.72
NR1I3-230ENST00000511944 MKL1Q969V6 931 aa10.54□□□□□ -0.72
NR1I3-230ENST00000511944 CEP95Q96GE4 821 aa10.54□□□□□ -0.72
NR1I3-230ENST00000511944 TMEM47Q9BQJ4 181 aa10.54□□□□□ -0.72
NR1I3-230ENST00000511944 ANP32EQ9BTT0 268 aa10.54□□□□□ -0.72
NR1I3-230ENST00000511944 SPZ1Q9BXG8 430 aa10.54□□□□□ -0.72
NR1I3-230ENST00000511944 DNAJC18Q9H819 358 aa10.54□□□□□ -0.72
NR1I3-230ENST00000511944 SENP2Q9HC62 589 aa10.54□□□□□ -0.72
NR1I3-230ENST00000511944 SBF1O95248 1867 aa10.53□□□□□ -0.72
NR1I3-230ENST00000511944 VPS37CA5D8V6 355 aaPredicted RBP10.53□□□□□ -0.72
NR1I3-230ENST00000511944 AKAP17AQ02040 695 aaKnown RBP10.53□□□□□ -0.72
NR1I3-230ENST00000511944 TCP10Q12799 353 aa10.53□□□□□ -0.72
NR1I3-230ENST00000511944 TRIM29Q14134 588 aa10.53□□□□□ -0.72
NR1I3-230ENST00000511944 GPATCH4Q5T3I0 446 aaKnown RBP10.53□□□□□ -0.72
NR1I3-230ENST00000511944 PTCRAQ6ISU1 281 aaPredicted RBP10.53□□□□□ -0.72
NR1I3-230ENST00000511944 NBPF11Q86T75 865 aa10.53□□□□□ -0.72
NR1I3-230ENST00000511944 STK11IPQ8N1F8 1099 aa10.53□□□□□ -0.72
NR1I3-230ENST00000511944 LRRN4Q8WUT4 740 aa10.53□□□□□ -0.72
NR1I3-230ENST00000511944 C8orf76Q96K31 380 aa10.53□□□□□ -0.72
NR1I3-230ENST00000511944 SH3GLB2Q9NR46 395 aa10.53□□□□□ -0.72
NR1I3-230ENST00000511944 PGAP2Q9UHJ9 254 aa10.53□□□□□ -0.72
NR1I3-230ENST00000511944 STX8Q9UNK0 236 aa10.53□□□□□ -0.72
NR1I3-230ENST00000511944 PCDHAC2Q9Y5I4 1007 aa10.53□□□□□ -0.72
NR1I3-230ENST00000511944 PALM3A6NDB9 673 aaPredicted RBP10.52□□□□□ -0.73
NR1I3-230ENST00000511944 AKR1B1P15121 316 aa10.52□□□□□ -0.73
NR1I3-230ENST00000511944 YBX3P16989 372 aaKnown RBP eCLIP10.52□□□□□ -0.73
NR1I3-230ENST00000511944 CACNB3P54284 484 aa10.52□□□□□ -0.73
NR1I3-230ENST00000511944 CDC37L1Q7L3B6 337 aa10.52□□□□□ -0.73
NR1I3-230ENST00000511944 ZFPM1Q8IX07 1006 aa10.52□□□□□ -0.73
NR1I3-230ENST00000511944 ANKLE1Q8NAG6 615 aa10.52□□□□□ -0.73
NR1I3-230ENST00000511944 GMCL1P1Q8NEA9 526 aa10.52□□□□□ -0.73
NR1I3-230ENST00000511944 NUP133Q8WUM0 1156 aa10.52□□□□□ -0.73
NR1I3-230ENST00000511944 ALG1Q9BT22 464 aa10.52□□□□□ -0.73
NR1I3-230ENST00000511944 SH2D4AQ9H788 454 aa10.52□□□□□ -0.73
NR1I3-230ENST00000511944 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.52□□□□□ -0.73
NR1I3-230ENST00000511944 CABP5Q9NP86 173 aa10.52□□□□□ -0.73
NR1I3-230ENST00000511944 ADARB2Q9NS39 739 aaKnown RBP10.52□□□□□ -0.73
NR1I3-230ENST00000511944 RNF181Q9P0P0 153 aa10.52□□□□□ -0.73
NR1I3-230ENST00000511944 ELP1O95163 1332 aa10.52□□□□□ -0.73
NR1I3-230ENST00000511944 CNTNAP5Q8WYK1 1306 aa10.52□□□□□ -0.73
NR1I3-230ENST00000511944 MYH8P13535 1937 aa10.51□□□□□ -0.73
NR1I3-230ENST00000511944 CLRN2A0PK11 232 aa10.51□□□□□ -0.73
NR1I3-230ENST00000511944 TCP10L2B9ZVM9 353 aa10.51□□□□□ -0.73
NR1I3-230ENST00000511944 NMT2O60551 498 aa10.51□□□□□ -0.73
NR1I3-230ENST00000511944 LMOD1P29536 600 aaPredicted RBP10.51□□□□□ -0.73
NR1I3-230ENST00000511944 GGCXP38435 758 aa10.51□□□□□ -0.73
NR1I3-230ENST00000511944 KRT85P78386 507 aa10.51□□□□□ -0.73
NR1I3-230ENST00000511944 RESTQ13127 1097 aa10.51□□□□□ -0.73
NR1I3-230ENST00000511944 PTPRNQ16849 979 aa10.51□□□□□ -0.73
NR1I3-230ENST00000511944 ABCB5Q2M3G0 1257 aa10.51□□□□□ -0.73
NR1I3-230ENST00000511944 NBPF9Q3BBW0 867 aa10.51□□□□□ -0.73
NR1I3-230ENST00000511944 DCAF15Q66K64 600 aa10.51□□□□□ -0.73
NR1I3-230ENST00000511944 GALNT17Q6IS24 598 aa10.51□□□□□ -0.73
NR1I3-230ENST00000511944 DCAF4Q8WV16 495 aa10.51□□□□□ -0.73
NR1I3-230ENST00000511944 DDX11Q96FC9 970 aa10.51□□□□□ -0.73
NR1I3-230ENST00000511944 GMCL1Q96IK5 515 aa10.51□□□□□ -0.73
NR1I3-230ENST00000511944 NUDT12Q9BQG2 462 aa10.51□□□□□ -0.73
NR1I3-230ENST00000511944 MYL10Q9BUA6 226 aa10.51□□□□□ -0.73
NR1I3-230ENST00000511944 SLC26A6Q9BXS9 759 aa10.51□□□□□ -0.73
NR1I3-230ENST00000511944 SCAND2PQ9GZW5 306 aaPredicted RBP10.51□□□□□ -0.73
NR1I3-230ENST00000511944 VEZTQ9HBM0 779 aa10.51□□□□□ -0.73
NR1I3-230ENST00000511944 HMX1Q9NP08 348 aaPredicted RBP10.51□□□□□ -0.73
NR1I3-230ENST00000511944 MAD2L2Q9UI95 211 aa10.51□□□□□ -0.73
NR1I3-230ENST00000511944 CFAP45Q9UL16 551 aa10.51□□□□□ -0.73
NR1I3-230ENST00000511944 GJA3Q9Y6H8 435 aa10.51□□□□□ -0.73
NR1I3-230ENST00000511944 MORC2Q9Y6X9 1032 aaPredicted RBP10.51□□□□□ -0.73
NR1I3-230ENST00000511944 MBD3O95983 291 aa10.5□□□□□ -0.73
NR1I3-230ENST00000511944 ASNSP08243 561 aa10.5□□□□□ -0.73
NR1I3-230ENST00000511944 PARP1P09874 1014 aaKnown RBP10.5□□□□□ -0.73
NR1I3-230ENST00000511944 RXRAP19793 462 aa10.5□□□□□ -0.73
NR1I3-230ENST00000511944 U2AF2P26368 475 aaKnown RBP eCLIP10.5□□□□□ -0.73
NR1I3-230ENST00000511944 ICA1Q05084 483 aa10.5□□□□□ -0.73
NR1I3-230ENST00000511944 RASA3Q14644 834 aa10.5□□□□□ -0.73
NR1I3-230ENST00000511944 SAFBQ15424 915 aaKnown RBP eCLIP10.5□□□□□ -0.73
NR1I3-230ENST00000511944 SLC4A8Q2Y0W8 1093 aa10.5□□□□□ -0.73
NR1I3-230ENST00000511944 TMEM259Q4ZIN3 620 aa10.5□□□□□ -0.73
NR1I3-230ENST00000511944 LIAT1Q6ZQX7 453 aa10.5□□□□□ -0.73
NR1I3-230ENST00000511944 TEPSINQ96N21 525 aa10.5□□□□□ -0.73
NR1I3-230ENST00000511944 ZNF396Q96N95 335 aaPredicted RBP10.5□□□□□ -0.73
NR1I3-230ENST00000511944 FOXP1Q9H334 677 aaPredicted RBP10.5□□□□□ -0.73
NR1I3-230ENST00000511944 ARHGEF10LQ9HCE6 1279 aa10.5□□□□□ -0.73
NR1I3-230ENST00000511944 KLRF2D3W0D1 207 aa10.49□□□□□ -0.73
NR1I3-230ENST00000511944 F12P00748 615 aaPredicted RBP10.49□□□□□ -0.73
NR1I3-230ENST00000511944 MMP1P03956 469 aa10.49□□□□□ -0.73
NR1I3-230ENST00000511944 CCNYL3P0C7X3 344 aa10.49□□□□□ -0.73
NR1I3-230ENST00000511944 PDHBP11177 359 aa10.49□□□□□ -0.73
NR1I3-230ENST00000511944 SCG2P13521 617 aa10.49□□□□□ -0.73
NR1I3-230ENST00000511944 CALML3P27482 149 aa10.49□□□□□ -0.73
NR1I3-230ENST00000511944 CAP2P40123 477 aa10.49□□□□□ -0.73
NR1I3-230ENST00000511944 KIF23Q02241 960 aaPredicted RBP10.49□□□□□ -0.73
NR1I3-230ENST00000511944 TRAF1Q13077 416 aa10.49□□□□□ -0.73
NR1I3-230ENST00000511944 PFKFB3Q16875 520 aaPredicted RBP10.49□□□□□ -0.73
NR1I3-230ENST00000511944 C9orf131Q5VYM1 1079 aa10.49□□□□□ -0.73
NR1I3-230ENST00000511944 USP50Q70EL3 339 aaPredicted RBP10.49□□□□□ -0.73
NR1I3-230ENST00000511944 SRBD1Q8N5C6 995 aaKnown RBP10.49□□□□□ -0.73
NR1I3-230ENST00000511944 CCDC148Q8NFR7 591 aa10.49□□□□□ -0.73
NR1I3-230ENST00000511944 CCDC12Q8WUD4 166 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms