RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 MKI67P46013 3256 aaKnown RBP28.32■■■□□ 2.12
SRPK1-210ENST00000508473 SNHG28P0DPA3 235 aa28.31■■■□□ 2.12
SRPK1-210ENST00000508473 ALAS1P13196 640 aa28.31■■■□□ 2.12
SRPK1-210ENST00000508473 CYBAP13498 195 aa28.31■■■□□ 2.12
SRPK1-210ENST00000508473 LHX8Q68G74 356 aa28.31■■■□□ 2.12
SRPK1-210ENST00000508473 ANKRD35Q8N283 1001 aa28.31■■■□□ 2.12
SRPK1-210ENST00000508473 PAWRQ96IZ0 340 aaKnown RBP28.31■■■□□ 2.12
SRPK1-210ENST00000508473 LSG1Q9H089 658 aaKnown RBP28.31■■■□□ 2.12
SRPK1-210ENST00000508473 RNF146Q9NTX7 359 aa28.31■■■□□ 2.12
SRPK1-210ENST00000508473 FBXO40Q9UH90 709 aa28.31■■■□□ 2.12
SRPK1-210ENST00000508473 OGDHLQ9ULD0 1010 aa28.31■■■□□ 2.12
SRPK1-210ENST00000508473 E7EWF7 191 aa28.3■■■□□ 2.12
SRPK1-210ENST00000508473 CAPN2P17655 700 aa28.3■■■□□ 2.12
SRPK1-210ENST00000508473 STOX1Q6ZVD7 989 aa28.3■■■□□ 2.12
SRPK1-210ENST00000508473 RANBP17Q9H2T7 1088 aaKnown RBP28.3■■■□□ 2.12
SRPK1-210ENST00000508473 DIS3Q9Y2L1 958 aaKnown RBP28.3■■■□□ 2.12
SRPK1-210ENST00000508473 TRERF1Q96PN7 1200 aa28.29■■■□□ 2.12
SRPK1-210ENST00000508473 ACAD9Q9H845 621 aa28.29■■■□□ 2.12
SRPK1-210ENST00000508473 DDX20Q9UHI6 824 aaKnown RBP28.29■■■□□ 2.12
SRPK1-210ENST00000508473 CCPG1Q9ULG6 757 aa28.29■■■□□ 2.12
SRPK1-210ENST00000508473 ZNFX1Q9P2E3 1918 aaKnown RBP28.29■■■□□ 2.12
SRPK1-210ENST00000508473 DNAJC25-GNG10A0A024R161 153 aa28.28■■■□□ 2.12
SRPK1-210ENST00000508473 IFIT1BQ5T764 474 aaKnown RBP28.28■■■□□ 2.12
SRPK1-210ENST00000508473 RALYLQ86SE5 291 aaKnown RBP28.28■■■□□ 2.12
SRPK1-210ENST00000508473 ANKLE1Q8NAG6 615 aa28.28■■■□□ 2.12
SRPK1-210ENST00000508473 DPF3Q92784 378 aa28.28■■■□□ 2.12
SRPK1-210ENST00000508473 TINF2Q9BSI4 451 aa28.28■■■□□ 2.12
SRPK1-210ENST00000508473 UBA5Q9GZZ9 404 aa28.28■■■□□ 2.12
SRPK1-210ENST00000508473 CPVLQ9H3G5 476 aa28.28■■■□□ 2.12
SRPK1-210ENST00000508473 ANO2Q9NQ90 1003 aa28.28■■■□□ 2.12
SRPK1-210ENST00000508473 CENPBP07199 599 aaPredicted RBP28.27■■■□□ 2.12
SRPK1-210ENST00000508473 MNX1P50219 401 aaPredicted RBP28.27■■■□□ 2.12
SRPK1-210ENST00000508473 SEC23AQ15436 765 aa28.27■■■□□ 2.12
SRPK1-210ENST00000508473 TKFCQ3LXA3 575 aa28.27■■■□□ 2.12
SRPK1-210ENST00000508473 PRPF38BQ5VTL8 546 aaKnown RBP28.27■■■□□ 2.12
SRPK1-210ENST00000508473 ANO1Q5XXA6 986 aa28.27■■■□□ 2.12
SRPK1-210ENST00000508473 CHST3Q7LGC8 479 aa28.27■■■□□ 2.12
SRPK1-210ENST00000508473 NCOA7Q8NI08 942 aa28.27■■■□□ 2.12
SRPK1-210ENST00000508473 ICAM1P05362 532 aa28.26■■■□□ 2.11
SRPK1-210ENST00000508473 MUM1L1Q5H9M0 696 aa28.26■■■□□ 2.11
SRPK1-210ENST00000508473 GPATCH4Q5T3I0 446 aaKnown RBP28.26■■■□□ 2.11
SRPK1-210ENST00000508473 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.26■■■□□ 2.11
SRPK1-210ENST00000508473 NECAB2Q7Z6G3 386 aa28.26■■■□□ 2.11
SRPK1-210ENST00000508473 HTATIP2Q9BUP3 242 aa28.26■■■□□ 2.11
SRPK1-210ENST00000508473 CDC45O75419 566 aa28.25■■■□□ 2.11
SRPK1-210ENST00000508473 A1CFQ9NQ94 594 aaKnown RBP28.25■■■□□ 2.11
SRPK1-210ENST00000508473 IFIT3O14879 490 aaKnown RBP28.24■■■□□ 2.11
SRPK1-210ENST00000508473 POTEB2H3BUK9 544 aa28.23■■■□□ 2.11
SRPK1-210ENST00000508473 SLC27A2O14975 620 aa28.23■■■□□ 2.11
SRPK1-210ENST00000508473 SEPT4O43236 478 aa28.23■■■□□ 2.11
SRPK1-210ENST00000508473 MSCO60682 206 aa28.23■■■□□ 2.11
SRPK1-210ENST00000508473 CNTN2Q02246 1040 aa28.23■■■□□ 2.11
SRPK1-210ENST00000508473 CASC1Q6TDU7 716 aa28.23■■■□□ 2.11
SRPK1-210ENST00000508473 FGD4Q96M96 766 aa28.23■■■□□ 2.11
SRPK1-210ENST00000508473 SENP2Q9HC62 589 aa28.23■■■□□ 2.11
SRPK1-210ENST00000508473 ERICH2A1L162 156 aa28.22■■■□□ 2.11
SRPK1-210ENST00000508473 PARP1P09874 1014 aaKnown RBP28.22■■■□□ 2.11
SRPK1-210ENST00000508473 ASPRV1Q53RT3 343 aa28.22■■■□□ 2.11
SRPK1-210ENST00000508473 NSMFQ6X4W1 530 aa28.22■■■□□ 2.11
SRPK1-210ENST00000508473 C11orf49Q9H6J7 331 aa28.22■■■□□ 2.11
SRPK1-210ENST00000508473 PLXNA1Q9UIW2 1896 aa28.21■■■□□ 2.11
SRPK1-210ENST00000508473 SNAI1O95863 264 aaPredicted RBP28.21■■■□□ 2.11
SRPK1-210ENST00000508473 ANTXR2P58335 489 aa28.21■■■□□ 2.11
SRPK1-210ENST00000508473 CREB3L3Q68CJ9 461 aa28.21■■■□□ 2.11
SRPK1-210ENST00000508473 MB21D2Q8IYB1 491 aaPredicted RBP28.21■■■□□ 2.11
SRPK1-210ENST00000508473 CNPY2Q9Y2B0 182 aa28.21■■■□□ 2.11
SRPK1-210ENST00000508473 WTAPQ15007 396 aa28.2■■■□□ 2.1
SRPK1-210ENST00000508473 NECTIN1Q15223 517 aa28.2■■■□□ 2.1
SRPK1-210ENST00000508473 MAMDC4Q6UXC1 1216 aa28.2■■■□□ 2.1
SRPK1-210ENST00000508473 ZNF467Q7Z7K2 595 aaPredicted RBP28.2■■■□□ 2.1
SRPK1-210ENST00000508473 ADGRF4Q8IZF3 695 aa28.2■■■□□ 2.1
SRPK1-210ENST00000508473 MSL3Q8N5Y2 521 aaKnown RBP28.2■■■□□ 2.1
SRPK1-210ENST00000508473 FAM133AQ8N9E0 248 aa28.2■■■□□ 2.1
SRPK1-210ENST00000508473 VAT1LQ9HCJ6 419 aa28.2■■■□□ 2.1
SRPK1-210ENST00000508473 PPP4R2Q9NY27 417 aa28.2■■■□□ 2.1
SRPK1-210ENST00000508473 NRBP1Q9UHY1 535 aa28.2■■■□□ 2.1
SRPK1-210ENST00000508473 PFASO15067 1338 aa28.19■■■□□ 2.1
SRPK1-210ENST00000508473 SYNGAP1Q96PV0 1343 aa28.19■■■□□ 2.1
SRPK1-210ENST00000508473 NFIBO00712 420 aa28.19■■■□□ 2.1
SRPK1-210ENST00000508473 DHX16O60231 1041 aaKnown RBP28.19■■■□□ 2.1
SRPK1-210ENST00000508473 MYCNP04198 464 aaPredicted RBP28.19■■■□□ 2.1
SRPK1-210ENST00000508473 ZNF865P0CJ78 1059 aaPredicted RBP28.19■■■□□ 2.1
SRPK1-210ENST00000508473 SART3Q15020 963 aaKnown RBP28.19■■■□□ 2.1
SRPK1-210ENST00000508473 TMEM67Q5HYA8 995 aa28.19■■■□□ 2.1
SRPK1-210ENST00000508473 STAG2Q8N3U4 1231 aa28.19■■■□□ 2.1
SRPK1-210ENST00000508473 CYP39A1Q9NYL5 469 aa28.19■■■□□ 2.1
SRPK1-210ENST00000508473 ZHX1Q9UKY1 873 aaPredicted RBP28.19■■■□□ 2.1
SRPK1-210ENST00000508473 SOWAHBA6NEL2 793 aa28.18■■■□□ 2.1
SRPK1-210ENST00000508473 CDC37Q16543 378 aaPredicted RBP28.18■■■□□ 2.1
SRPK1-210ENST00000508473 USH1GQ495M9 461 aa28.18■■■□□ 2.1
SRPK1-210ENST00000508473 PURBQ96QR8 312 aaKnown RBP28.18■■■□□ 2.1
SRPK1-210ENST00000508473 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.18■■■□□ 2.1
SRPK1-210ENST00000508473 H0YGN5 161 aa28.17■■■□□ 2.1
SRPK1-210ENST00000508473 COL9A3Q14050 684 aaPredicted RBP28.17■■■□□ 2.1
SRPK1-210ENST00000508473 GJC2Q5T442 439 aaPredicted RBP28.17■■■□□ 2.1
SRPK1-210ENST00000508473 ARMCX2Q7L311 632 aa28.17■■■□□ 2.1
SRPK1-210ENST00000508473 IGDCC4Q8TDY8 1250 aa28.17■■■□□ 2.1
SRPK1-210ENST00000508473 CLEC4DQ8WXI8 215 aa28.17■■■□□ 2.1
SRPK1-210ENST00000508473 GPHNQ9NQX3 736 aaPredicted RBP28.17■■■□□ 2.1
SRPK1-210ENST00000508473 SMCHD1A6NHR9 2005 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms