RNA–Protein interactions for RNA: ENST00000490546.1

PUM1-210, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 4

Gene PUM1, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-210ENST00000490546 AMNQ9BXJ7 453 aa11.94□□□□□ -0.5
PUM1-210ENST00000490546 ASCC2Q9H1I8 757 aaPredicted RBP11.94□□□□□ -0.5
PUM1-210ENST00000490546 LOC285556D6RIA3 1793 aa11.93□□□□□ -0.5
PUM1-210ENST00000490546 VWA5AO00534 786 aa11.93□□□□□ -0.5
PUM1-210ENST00000490546 DTNBO60941 627 aa11.93□□□□□ -0.5
PUM1-210ENST00000490546 FOSBP53539 338 aa11.93□□□□□ -0.5
PUM1-210ENST00000490546 NAPAP54920 295 aa11.93□□□□□ -0.5
PUM1-210ENST00000490546 SNAP25P60880 206 aa11.93□□□□□ -0.5
PUM1-210ENST00000490546 MOGSQ13724 837 aa11.93□□□□□ -0.5
PUM1-210ENST00000490546 SAFBQ15424 915 aaKnown RBP eCLIP11.93□□□□□ -0.5
PUM1-210ENST00000490546 QRICH1Q2TAL8 776 aa11.93□□□□□ -0.5
PUM1-210ENST00000490546 GPAT2Q6NUI2 795 aa11.93□□□□□ -0.5
PUM1-210ENST00000490546 FAM177A1Q8N128 213 aaPredicted RBP11.93□□□□□ -0.5
PUM1-210ENST00000490546 CCDC148Q8NFR7 591 aa11.93□□□□□ -0.5
PUM1-210ENST00000490546 ATG4CQ96DT6 458 aa11.93□□□□□ -0.5
PUM1-210ENST00000490546 MTMR8Q96EF0 704 aa11.93□□□□□ -0.5
PUM1-210ENST00000490546 PARK7Q99497 189 aaKnown RBP11.93□□□□□ -0.5
PUM1-210ENST00000490546 P2RX7Q99572 595 aaKnown RBP11.93□□□□□ -0.5
PUM1-210ENST00000490546 RANBP17Q9H2T7 1088 aaKnown RBP11.93□□□□□ -0.5
PUM1-210ENST00000490546 SLC38A10Q9HBR0 1119 aa11.93□□□□□ -0.5
PUM1-210ENST00000490546 BRMS1Q9HCU9 246 aa11.93□□□□□ -0.5
PUM1-210ENST00000490546 SH3GLB2Q9NR46 395 aa11.93□□□□□ -0.5
PUM1-210ENST00000490546 PCDHA1Q9Y5I3 950 aa11.93□□□□□ -0.5
PUM1-210ENST00000490546 TESPA1A2RU30 521 aaPredicted RBP11.92□□□□□ -0.5
PUM1-210ENST00000490546 FAM155AB1AL88 458 aaPredicted RBP11.92□□□□□ -0.5
PUM1-210ENST00000490546 FDPSP14324 419 aaKnown RBP11.92□□□□□ -0.5
PUM1-210ENST00000490546 CALML3P27482 149 aa11.92□□□□□ -0.5
PUM1-210ENST00000490546 NLRP5P59047 1200 aa11.92□□□□□ -0.5
PUM1-210ENST00000490546 HERVK_113P62684 666 aa11.92□□□□□ -0.5
PUM1-210ENST00000490546 KIF23Q02241 960 aaPredicted RBP11.92□□□□□ -0.5
PUM1-210ENST00000490546 GNL2Q13823 731 aaKnown RBP11.92□□□□□ -0.5
PUM1-210ENST00000490546 PLS1Q14651 629 aa11.92□□□□□ -0.5
PUM1-210ENST00000490546 PKN1Q16512 942 aa11.92□□□□□ -0.5
PUM1-210ENST00000490546 SLC35G1Q2M3R5 365 aa11.92□□□□□ -0.5
PUM1-210ENST00000490546 CPXCR1Q8N123 301 aa11.92□□□□□ -0.5
PUM1-210ENST00000490546 SMCR8Q8TEV9 937 aaPredicted RBP11.92□□□□□ -0.5
PUM1-210ENST00000490546 GPKOWQ92917 476 aaPredicted RBP eCLIP11.92□□□□□ -0.54e-13■■■■■ 26.9
PUM1-210ENST00000490546 GLT8D2Q9H1C3 349 aa11.92□□□□□ -0.5
PUM1-210ENST00000490546 ZCCHC17Q9NP64 241 aaKnown RBP11.92□□□□□ -0.5
PUM1-210ENST00000490546 BARHL2Q9NY43 387 aa11.92□□□□□ -0.5
PUM1-210ENST00000490546 CCPG1Q9ULG6 757 aa11.92□□□□□ -0.5
PUM1-210ENST00000490546 MRPL11Q9Y3B7 192 aaKnown RBP11.92□□□□□ -0.5
PUM1-210ENST00000490546 VPS37CA5D8V6 355 aaPredicted RBP11.91□□□□□ -0.5
PUM1-210ENST00000490546 SPDYE16A6NNV3 312 aaPredicted RBP11.91□□□□□ -0.5
PUM1-210ENST00000490546 STX6O43752 255 aa11.91□□□□□ -0.5
PUM1-210ENST00000490546 ALDH1A1P00352 501 aa11.91□□□□□ -0.5
PUM1-210ENST00000490546 ICAM1P05362 532 aa11.91□□□□□ -0.5
PUM1-210ENST00000490546 SYT1P21579 422 aa11.91□□□□□ -0.5
PUM1-210ENST00000490546 GNA11P29992 359 aa11.91□□□□□ -0.5
PUM1-210ENST00000490546 GCLCP48506 637 aaPredicted RBP11.91□□□□□ -0.5
PUM1-210ENST00000490546 OAZ1P54368 228 aa11.91□□□□□ -0.5
PUM1-210ENST00000490546 NUCB2P80303 420 aa11.91□□□□□ -0.5
PUM1-210ENST00000490546 USH1GQ495M9 461 aa11.91□□□□□ -0.5
PUM1-210ENST00000490546 WWC2Q6AWC2 1192 aa11.91□□□□□ -0.5
PUM1-210ENST00000490546 MCTP1Q6DN14 999 aa11.91□□□□□ -0.5
PUM1-210ENST00000490546 PPP1R18Q6NYC8 613 aa11.91□□□□□ -0.5
PUM1-210ENST00000490546 IFNL1Q8IU54 200 aa11.91□□□□□ -0.5
PUM1-210ENST00000490546 RGS22Q8NE09 1264 aa11.91□□□□□ -0.5
PUM1-210ENST00000490546 BICD2Q8TD16 824 aa11.91□□□□□ -0.5
PUM1-210ENST00000490546 COA7Q96BR5 231 aa11.91□□□□□ -0.5
PUM1-210ENST00000490546 AIFM3Q96NN9 605 aa11.91□□□□□ -0.5
PUM1-210ENST00000490546 PAGR1Q9BTK6 254 aa11.91□□□□□ -0.5
PUM1-210ENST00000490546 RAVER2Q9HCJ3 691 aaKnown RBP11.91□□□□□ -0.5
PUM1-210ENST00000490546 C6orf50Q9HD87 102 aa11.91□□□□□ -0.5
PUM1-210ENST00000490546 VPS54Q9P1Q0 977 aa11.91□□□□□ -0.5
PUM1-210ENST00000490546 CIZ1Q9ULV3 898 aaPredicted RBP11.91□□□□□ -0.5
PUM1-210ENST00000490546 ADAMTS5Q9UNA0 930 aa11.91□□□□□ -0.5
PUM1-210ENST00000490546 RABGAP1Q9Y3P9 1069 aa11.91□□□□□ -0.5
PUM1-210ENST00000490546 ABCB11O95342 1321 aa11.9□□□□□ -0.5
PUM1-210ENST00000490546 WDR33Q9C0J8 1336 aaKnown RBP11.9□□□□□ -0.5
PUM1-210ENST00000490546 STXBP3O00186 592 aa11.9□□□□□ -0.5
PUM1-210ENST00000490546 ALAS1P13196 640 aa11.9□□□□□ -0.5
PUM1-210ENST00000490546 MAP2K2P36507 400 aa11.9□□□□□ -0.5
PUM1-210ENST00000490546 STAT3P40763 770 aa11.9□□□□□ -0.5
PUM1-210ENST00000490546 TM4SF4P48230 202 aa11.9□□□□□ -0.5
PUM1-210ENST00000490546 ADCY7P51828 1080 aa11.9□□□□□ -0.5
PUM1-210ENST00000490546 MRPL12P52815 198 aaKnown RBP11.9□□□□□ -0.5
PUM1-210ENST00000490546 CCNA1P78396 465 aa11.9□□□□□ -0.5
PUM1-210ENST00000490546 GUCY1B3Q02153 619 aa11.9□□□□□ -0.5
PUM1-210ENST00000490546 TAF1CQ15572 869 aaPredicted RBP11.9□□□□□ -0.5
PUM1-210ENST00000490546 TKFCQ3LXA3 575 aa11.9□□□□□ -0.5
PUM1-210ENST00000490546 KRT40Q6A162 431 aa11.9□□□□□ -0.5
PUM1-210ENST00000490546 SNRNP48Q6IEG0 339 aaKnown RBP11.9□□□□□ -0.5
PUM1-210ENST00000490546 GALNT17Q6IS24 598 aa11.9□□□□□ -0.5
PUM1-210ENST00000490546 LBX2Q6XYB7 198 aa11.9□□□□□ -0.5
PUM1-210ENST00000490546 CCAR1Q8IX12 1150 aaKnown RBP11.9□□□□□ -0.5
PUM1-210ENST00000490546 FAM43AQ8N2R8 423 aa11.9□□□□□ -0.5
PUM1-210ENST00000490546 FBXO18Q8NFZ0 1043 aa11.9□□□□□ -0.5
PUM1-210ENST00000490546 CUL5Q93034 780 aa11.9□□□□□ -0.5
PUM1-210ENST00000490546 PTPN18Q99952 460 aa11.9□□□□□ -0.5
PUM1-210ENST00000490546 ZFYVE28Q9HCC9 887 aa11.9□□□□□ -0.5
PUM1-210ENST00000490546 CHMP5Q9NZZ3 219 aa11.9□□□□□ -0.5
PUM1-210ENST00000490546 COL11A1P12107 1806 aaPredicted RBP11.89□□□□□ -0.51
PUM1-210ENST00000490546 PARP14Q460N5 1801 aa11.89□□□□□ -0.51
PUM1-210ENST00000490546 SMCO2A6NFE2 343 aa11.89□□□□□ -0.51
PUM1-210ENST00000490546 AOC2O75106 756 aa11.89□□□□□ -0.51
PUM1-210ENST00000490546 CYP2C8P10632 490 aa11.89□□□□□ -0.51
PUM1-210ENST00000490546 COPB2P35606 906 aa11.89□□□□□ -0.51
PUM1-210ENST00000490546 C1QTNF8P60827 252 aa11.89□□□□□ -0.51
PUM1-210ENST00000490546 MCF2L2Q86YR7 1114 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms