RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 STX8Q9UNK0 236 aa12.52□□□□□ -0.41
DDX56-212ENST00000485367 CTDP1Q9Y5B0 961 aaPredicted RBP12.52□□□□□ -0.41
DDX56-212ENST00000485367 NR2E3Q9Y5X4 410 aa12.52□□□□□ -0.41
DDX56-212ENST00000485367 TACC3Q9Y6A5 838 aa12.52□□□□□ -0.41
DDX56-212ENST00000485367 ST18O60284 1047 aa12.51□□□□□ -0.41
DDX56-212ENST00000485367 NMT2O60551 498 aa12.51□□□□□ -0.41
DDX56-212ENST00000485367 ZBED4O75132 1171 aa12.51□□□□□ -0.41
DDX56-212ENST00000485367 BMP3P12645 472 aa12.51□□□□□ -0.41
DDX56-212ENST00000485367 RRP12Q5JTH9 1297 aaKnown RBP12.51□□□□□ -0.41
DDX56-212ENST00000485367 PPP4R3BQ5MIZ7 849 aa12.51□□□□□ -0.41
DDX56-212ENST00000485367 LHX8Q68G74 356 aa12.51□□□□□ -0.41
DDX56-212ENST00000485367 MCTP1Q6DN14 999 aa12.51□□□□□ -0.41
DDX56-212ENST00000485367 CAVIN1Q6NZI2 390 aaKnown RBP12.51□□□□□ -0.41
DDX56-212ENST00000485367 LRSAM1Q6UWE0 723 aa12.51□□□□□ -0.41
DDX56-212ENST00000485367 NBPF3Q9H094 633 aa12.51□□□□□ -0.41
DDX56-212ENST00000485367 DIAPH3Q9NSV4 1193 aa12.51□□□□□ -0.41
DDX56-212ENST00000485367 FEM1BQ9UK73 627 aa12.51□□□□□ -0.41
DDX56-212ENST00000485367 ZNF214Q9UL59 606 aaPredicted RBP12.51□□□□□ -0.41
DDX56-212ENST00000485367 R3HCC1Q9Y3T6 440 aaKnown RBP12.51□□□□□ -0.41
DDX56-212ENST00000485367 UQCRHLA0A096LP55 91 aa12.51□□□□□ -0.41
DDX56-212ENST00000485367 ORC4O43929 436 aa12.51□□□□□ -0.41
DDX56-212ENST00000485367 EVI5O60447 810 aa12.51□□□□□ -0.41
DDX56-212ENST00000485367 PGK2P07205 417 aa12.51□□□□□ -0.41
DDX56-212ENST00000485367 UQCRHP07919 91 aa12.51□□□□□ -0.41
DDX56-212ENST00000485367 COPB2P35606 906 aa12.51□□□□□ -0.41
DDX56-212ENST00000485367 MNX1P50219 401 aaPredicted RBP12.51□□□□□ -0.41
DDX56-212ENST00000485367 HAND2P61296 217 aa12.51□□□□□ -0.41
DDX56-212ENST00000485367 KCTD2Q14681 263 aa12.51□□□□□ -0.41
DDX56-212ENST00000485367 OLFML2BQ68BL8 750 aa12.51□□□□□ -0.41
DDX56-212ENST00000485367 SNRNP48Q6IEG0 339 aaKnown RBP12.51□□□□□ -0.41
DDX56-212ENST00000485367 CWC27Q6UX04 472 aaKnown RBP12.51□□□□□ -0.41
DDX56-212ENST00000485367 CPXCR1Q8N123 301 aa12.51□□□□□ -0.41
DDX56-212ENST00000485367 TRPV1Q8NER1 839 aa12.51□□□□□ -0.41
DDX56-212ENST00000485367 TEX13BQ9BXU2 312 aa12.51□□□□□ -0.41
DDX56-212ENST00000485367 RBSNQ9H1K0 784 aa12.51□□□□□ -0.41
DDX56-212ENST00000485367 IL17RBQ9NRM6 502 aa12.51□□□□□ -0.41
DDX56-212ENST00000485367 CASC1Q6TDU7 716 aa12.5□□□□□ -0.41
DDX56-212ENST00000485367 C11orf49Q9H6J7 331 aa12.5□□□□□ -0.41
DDX56-212ENST00000485367 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.5□□□□□ -0.41
DDX56-212ENST00000485367 DDX20Q9UHI6 824 aaKnown RBP12.5□□□□□ -0.41
DDX56-212ENST00000485367 TMEM232C9JQI7 657 aa12.49□□□□□ -0.41
DDX56-212ENST00000485367 HIP1O00291 1037 aa12.49□□□□□ -0.41
DDX56-212ENST00000485367 IGHA2P01877 340 aa12.49□□□□□ -0.41
DDX56-212ENST00000485367 FGRP09769 529 aa12.49□□□□□ -0.41
DDX56-212ENST00000485367 MCCP23508 829 aa12.49□□□□□ -0.41
DDX56-212ENST00000485367 SLC1A4P43007 532 aa12.49□□□□□ -0.41
DDX56-212ENST00000485367 IKQ13123 557 aaPredicted RBP12.49□□□□□ -0.41
DDX56-212ENST00000485367 HABP4Q5JVS0 413 aaKnown RBP12.49□□□□□ -0.41
DDX56-212ENST00000485367 MAML3Q96JK9 1138 aa12.49□□□□□ -0.41
DDX56-212ENST00000485367 USP26Q9BXU7 913 aa12.49□□□□□ -0.41
DDX56-212ENST00000485367 RAVER2Q9HCJ3 691 aaKnown RBP12.49□□□□□ -0.41
DDX56-212ENST00000485367 FOXD4L1Q9NU39 408 aa12.49□□□□□ -0.41
DDX56-212ENST00000485367 COLQQ9Y215 455 aaPredicted RBP12.49□□□□□ -0.41
DDX56-212ENST00000485367 MTMR7Q9Y216 660 aa12.49□□□□□ -0.41
DDX56-212ENST00000485367 RIPK3Q9Y572 518 aa12.49□□□□□ -0.41
DDX56-212ENST00000485367 ZMYM6O95789 1325 aa12.49□□□□□ -0.41
DDX56-212ENST00000485367 PLXNA1Q9UIW2 1896 aa12.49□□□□□ -0.41
DDX56-212ENST00000485367 ALPK3Q96L96 1907 aa12.49□□□□□ -0.41
DDX56-212ENST00000485367 FRMPD3Q5JV73 1810 aa12.49□□□□□ -0.41
DDX56-212ENST00000485367 CYBAP13498 195 aa12.48□□□□□ -0.41
DDX56-212ENST00000485367 PRAMEF19Q5SWL8 479 aa12.48□□□□□ -0.41
DDX56-212ENST00000485367 GMCL1Q96IK5 515 aa12.48□□□□□ -0.41
DDX56-212ENST00000485367 SLC38A10Q9HBR0 1119 aa12.48□□□□□ -0.41
DDX56-212ENST00000485367 MSCO60682 206 aa12.48□□□□□ -0.41
DDX56-212ENST00000485367 STAT2P52630 851 aa12.48□□□□□ -0.41
DDX56-212ENST00000485367 TTC22Q5TAA0 569 aa12.48□□□□□ -0.41
DDX56-212ENST00000485367 CHRDL2Q6WN34 429 aa12.48□□□□□ -0.41
DDX56-212ENST00000485367 MFSD6Q6ZSS7 791 aa12.48□□□□□ -0.41
DDX56-212ENST00000485367 KCTD1Q719H9 257 aa12.48□□□□□ -0.41
DDX56-212ENST00000485367 C7orf61Q8IZ16 206 aa12.48□□□□□ -0.41
DDX56-212ENST00000485367 CHURC1Q8WUH1 139 aa12.48□□□□□ -0.41
DDX56-212ENST00000485367 STAG1Q8WVM7 1258 aa12.48□□□□□ -0.41
DDX56-212ENST00000485367 DDX11Q96FC9 970 aa12.48□□□□□ -0.41
DDX56-212ENST00000485367 FAM13BQ9NYF5 915 aa12.48□□□□□ -0.41
DDX56-212ENST00000485367 TRIOBPQ9H2D6 2365 aa12.47□□□□□ -0.41
DDX56-212ENST00000485367 ATP2A1O14983 1001 aa12.47□□□□□ -0.41
DDX56-212ENST00000485367 SLC34A2O95436 690 aa12.47□□□□□ -0.41
DDX56-212ENST00000485367 MCM2P49736 904 aa12.47□□□□□ -0.41
DDX56-212ENST00000485367 CCDC96Q2M329 555 aa12.47□□□□□ -0.41
DDX56-212ENST00000485367 ZNF792Q3KQV3 632 aa12.47□□□□□ -0.41
DDX56-212ENST00000485367 AKNAD1Q5T1N1 836 aa12.47□□□□□ -0.41
DDX56-212ENST00000485367 ANO1Q5XXA6 986 aa12.47□□□□□ -0.41
DDX56-212ENST00000485367 RCSD1Q6JBY9 416 aa12.47□□□□□ -0.41
DDX56-212ENST00000485367 FAM160B2Q86V87 743 aa12.47□□□□□ -0.41
DDX56-212ENST00000485367 TBC1D10CQ8IV04 446 aa12.47□□□□□ -0.41
DDX56-212ENST00000485367 SYAP1Q96A49 352 aaPredicted RBP12.47□□□□□ -0.41
DDX56-212ENST00000485367 ZNF213O14771 459 aa12.46□□□□□ -0.41
DDX56-212ENST00000485367 REC8O95072 547 aa12.46□□□□□ -0.41
DDX56-212ENST00000485367 MYCNP04198 464 aaPredicted RBP12.46□□□□□ -0.41
DDX56-212ENST00000485367 TOP1P11387 765 aaKnown RBP12.46□□□□□ -0.41
DDX56-212ENST00000485367 GSPT1P15170 499 aaKnown RBP12.46□□□□□ -0.41
DDX56-212ENST00000485367 RASGRP2Q7LDG7 609 aa12.46□□□□□ -0.41
DDX56-212ENST00000485367 TMEM47Q9BQJ4 181 aa12.46□□□□□ -0.41
DDX56-212ENST00000485367 TINF2Q9BSI4 451 aa12.46□□□□□ -0.41
DDX56-212ENST00000485367 RNF41Q9H4P4 317 aaPredicted RBP12.46□□□□□ -0.41
DDX56-212ENST00000485367 DIS3Q9Y2L1 958 aaKnown RBP12.46□□□□□ -0.41
DDX56-212ENST00000485367 PFASO15067 1338 aa12.46□□□□□ -0.41
DDX56-212ENST00000485367 SMCHD1A6NHR9 2005 aa12.46□□□□□ -0.41
DDX56-212ENST00000485367 SEPT4O43236 478 aa12.46□□□□□ -0.42
DDX56-212ENST00000485367 FDX1P10109 184 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms