RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 TCFL5Q9UL49 500 aa7.34□□□□□ -1.23
HMGB1P26-201ENST00000452520 SLC5A6Q9Y289 635 aa7.34□□□□□ -1.23
HMGB1P26-201ENST00000452520 GPR55Q9Y2T6 319 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P26-201ENST00000452520 PCDHA11Q9Y5I1 949 aa7.34□□□□□ -1.23
HMGB1P26-201ENST00000452520 TRAV20A0A0B4J274 112 aa7.33□□□□□ -1.24
HMGB1P26-201ENST00000452520 ZNF205O95201 554 aa7.33□□□□□ -1.24
HMGB1P26-201ENST00000452520 HOXC12P31275 282 aa7.33□□□□□ -1.24
HMGB1P26-201ENST00000452520 SF1Q15637 639 aaKnown RBP7.33□□□□□ -1.24
HMGB1P26-201ENST00000452520 DPY19L1Q2PZI1 675 aa7.33□□□□□ -1.24
HMGB1P26-201ENST00000452520 ZC3H12BQ5HYM0 836 aaKnown RBP7.33□□□□□ -1.24
HMGB1P26-201ENST00000452520 YOD1Q5VVQ6 348 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P26-201ENST00000452520 FOXB2Q5VYV0 432 aa7.33□□□□□ -1.24
HMGB1P26-201ENST00000452520 SDE2Q6IQ49 451 aa7.33□□□□□ -1.24
HMGB1P26-201ENST00000452520 BTN2A2Q8WVV5 523 aa7.33□□□□□ -1.24
HMGB1P26-201ENST00000452520 CCDC140Q96MF4 163 aa7.33□□□□□ -1.24
HMGB1P26-201ENST00000452520 SLC26A8Q96RN1 970 aa7.33□□□□□ -1.24
HMGB1P26-201ENST00000452520 MCMBPQ9BTE3 642 aa7.33□□□□□ -1.24
HMGB1P26-201ENST00000452520 FOXP3Q9BZS1 431 aa7.33□□□□□ -1.24
HMGB1P26-201ENST00000452520 LMCD1Q9NZU5 365 aa7.33□□□□□ -1.24
HMGB1P26-201ENST00000452520 CCDC39Q9UFE4 941 aa7.33□□□□□ -1.24
HMGB1P26-201ENST00000452520 KIAA1324LA8MWY0 1029 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P26-201ENST00000452520 AURKAO14965 403 aa7.32□□□□□ -1.24
HMGB1P26-201ENST00000452520 CD3EP07766 207 aa7.32□□□□□ -1.24
HMGB1P26-201ENST00000452520 CD8BP10966 210 aa7.32□□□□□ -1.24
HMGB1P26-201ENST00000452520 FGFR1P11362 822 aa7.32□□□□□ -1.24
HMGB1P26-201ENST00000452520 PABPC1P11940 636 aaKnown RBP7.32□□□□□ -1.24
HMGB1P26-201ENST00000452520 SPINK2P20155 84 aa7.32□□□□□ -1.24
HMGB1P26-201ENST00000452520 LTKP29376 864 aa7.32□□□□□ -1.24
HMGB1P26-201ENST00000452520 EGR3Q06889 387 aa7.32□□□□□ -1.24
HMGB1P26-201ENST00000452520 IKZF1Q13422 519 aa7.32□□□□□ -1.24
HMGB1P26-201ENST00000452520 SCUBE1Q8IWY4 988 aa7.32□□□□□ -1.24
HMGB1P26-201ENST00000452520 TMEM260Q9NX78 707 aa7.32□□□□□ -1.24
HMGB1P26-201ENST00000452520 PTCH2Q9Y6C5 1203 aa7.32□□□□□ -1.24
HMGB1P26-201ENST00000452520 ESYT3A0FGR9 886 aa7.31□□□□□ -1.24
HMGB1P26-201ENST00000452520 PRODHO43272 600 aa7.31□□□□□ -1.24
HMGB1P26-201ENST00000452520 GSTM1P09488 218 aa7.31□□□□□ -1.24
HMGB1P26-201ENST00000452520 TEKQ02763 1124 aa7.31□□□□□ -1.24
HMGB1P26-201ENST00000452520 FAM209AQ5JX71 171 aa7.31□□□□□ -1.24
HMGB1P26-201ENST00000452520 RTP2Q5QGT7 225 aa7.31□□□□□ -1.24
HMGB1P26-201ENST00000452520 NSMFQ6X4W1 530 aa7.31□□□□□ -1.24
HMGB1P26-201ENST00000452520 ZSWIM2Q8NEG5 633 aa7.31□□□□□ -1.24
HMGB1P26-201ENST00000452520 OSBP2Q969R2 916 aa7.31□□□□□ -1.24
HMGB1P26-201ENST00000452520 CDC6Q99741 560 aa7.31□□□□□ -1.24
HMGB1P26-201ENST00000452520 IER2Q9BTL4 223 aa7.31□□□□□ -1.24
HMGB1P26-201ENST00000452520 ZNF281Q9Y2X9 895 aa7.31□□□□□ -1.24
HMGB1P26-201ENST00000452520 C2orf71A6NGG8 1288 aa7.3□□□□□ -1.24
HMGB1P26-201ENST00000452520 FKTNO75072 461 aa7.3□□□□□ -1.24
HMGB1P26-201ENST00000452520 SCG5P05408 212 aa7.3□□□□□ -1.24
HMGB1P26-201ENST00000452520 SNRPB2P08579 225 aaKnown RBP7.3□□□□□ -1.24
HMGB1P26-201ENST00000452520 IFNGR1P15260 489 aa7.3□□□□□ -1.24
HMGB1P26-201ENST00000452520 L1CAMP32004 1257 aa7.3□□□□□ -1.24
HMGB1P26-201ENST00000452520 KCNJ6P48051 423 aa7.3□□□□□ -1.24
HMGB1P26-201ENST00000452520 GFRA1P56159 465 aa7.3□□□□□ -1.24
HMGB1P26-201ENST00000452520 CYP4F3Q08477 520 aa7.3□□□□□ -1.24
HMGB1P26-201ENST00000452520 WFDC3Q8IUB2 231 aa7.3□□□□□ -1.24
HMGB1P26-201ENST00000452520 COPS5Q92905 334 aa7.3□□□□□ -1.24
HMGB1P26-201ENST00000452520 IPO9Q96P70 1041 aaKnown RBP7.3□□□□□ -1.24
HMGB1P26-201ENST00000452520 DHRS4Q9BTZ2 278 aa7.3□□□□□ -1.24
HMGB1P26-201ENST00000452520 CARS2Q9HA77 564 aaKnown RBP7.3□□□□□ -1.24
HMGB1P26-201ENST00000452520 AP5S1Q9NUS5 200 aa7.3□□□□□ -1.24
HMGB1P26-201ENST00000452520 FANCLQ9NW38 375 aa7.3□□□□□ -1.24
HMGB1P26-201ENST00000452520 TRBV23-1A0A0A0MS06 115 aa7.29□□□□□ -1.24
HMGB1P26-201ENST00000452520 CCDC163A0A0D9SF12 145 aa7.29□□□□□ -1.24
HMGB1P26-201ENST00000452520 TMEM82A0PJX8 343 aa7.29□□□□□ -1.24
HMGB1P26-201ENST00000452520 STXBP3O00186 592 aa7.29□□□□□ -1.24
HMGB1P26-201ENST00000452520 ENPP3O14638 875 aa7.29□□□□□ -1.24
HMGB1P26-201ENST00000452520 DLX3O60479 287 aa7.29□□□□□ -1.24
HMGB1P26-201ENST00000452520 CPP00450 1065 aa7.29□□□□□ -1.24
HMGB1P26-201ENST00000452520 RPL10P27635 214 aaKnown RBP7.29□□□□□ -1.24
HMGB1P26-201ENST00000452520 ZP2Q05996 745 aa7.29□□□□□ -1.24
HMGB1P26-201ENST00000452520 SCRN1Q12765 414 aa7.29□□□□□ -1.24
HMGB1P26-201ENST00000452520 TMEM67Q5HYA8 995 aa7.29□□□□□ -1.24
HMGB1P26-201ENST00000452520 ANGEL2Q5VTE6 544 aaKnown RBP7.29□□□□□ -1.24
HMGB1P26-201ENST00000452520 ZNF574Q6ZN55 896 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P26-201ENST00000452520 NFXL1Q6ZNB6 911 aa7.29□□□□□ -1.24
HMGB1P26-201ENST00000452520 VSIG10LQ86VR7 867 aa7.29□□□□□ -1.24
HMGB1P26-201ENST00000452520 HOMER1Q86YM7 354 aa7.29□□□□□ -1.24
HMGB1P26-201ENST00000452520 APPBP2Q92624 585 aa7.29□□□□□ -1.24
HMGB1P26-201ENST00000452520 KISS1RQ969F8 398 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P26-201ENST00000452520 EXOC2Q96KP1 924 aa7.29□□□□□ -1.24
HMGB1P26-201ENST00000452520 CDADC1Q9BWV3 514 aa7.29□□□□□ -1.24
HMGB1P26-201ENST00000452520 BACE2Q9Y5Z0 518 aa7.29□□□□□ -1.24
HMGB1P26-201ENST00000452520 ANKRD62A6NC57 917 aa7.28□□□□□ -1.24
HMGB1P26-201ENST00000452520 ADAMTS4O75173 837 aa7.28□□□□□ -1.24
HMGB1P26-201ENST00000452520 NCLP19338 710 aaKnown RBP7.28□□□□□ -1.24
HMGB1P26-201ENST00000452520 HSD3B2P26439 372 aa7.28□□□□□ -1.24
HMGB1P26-201ENST00000452520 ECI1P42126 302 aa7.28□□□□□ -1.24
HMGB1P26-201ENST00000452520 SEPHS1P49903 392 aa7.28□□□□□ -1.24
HMGB1P26-201ENST00000452520 EEF1DP3Q658K8 133 aa7.28□□□□□ -1.24
HMGB1P26-201ENST00000452520 RCSD1Q6JBY9 416 aa7.28□□□□□ -1.24
HMGB1P26-201ENST00000452520 ZPBP2Q6X784 338 aa7.28□□□□□ -1.24
HMGB1P26-201ENST00000452520 WAPLQ7Z5K2 1190 aa7.28□□□□□ -1.24
HMGB1P26-201ENST00000452520 TMEM145Q8NBT3 493 aa7.28□□□□□ -1.24
HMGB1P26-201ENST00000452520 KREMEN2Q8NCW0 462 aa7.28□□□□□ -1.24
HMGB1P26-201ENST00000452520 KCTD13Q8WZ19 329 aa7.28□□□□□ -1.24
HMGB1P26-201ENST00000452520 GPRC5CQ9NQ84 441 aa7.28□□□□□ -1.24
HMGB1P26-201ENST00000452520 PAK6Q9NQU5 681 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P26-201ENST00000452520 MRPS23Q9Y3D9 190 aaKnown RBP7.28□□□□□ -1.24
HMGB1P26-201ENST00000452520 THBDP07204 575 aa7.27□□□□□ -1.25
HMGB1P26-201ENST00000452520 ENDOUP21128 410 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms