RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 IFNL1Q8IU54 200 aa16.93■□□□□ 0.3
SHANK2-210ENST00000449116 FAM184AQ8NB25 1140 aa16.93■□□□□ 0.3
SHANK2-210ENST00000449116 SPRYD3Q8NCJ5 442 aa16.93■□□□□ 0.3
SHANK2-210ENST00000449116 WASF1Q92558 559 aa16.93■□□□□ 0.3
SHANK2-210ENST00000449116 IPO9Q96P70 1041 aaKnown RBP16.93■□□□□ 0.3
SHANK2-210ENST00000449116 PARK7Q99497 189 aaKnown RBP16.93■□□□□ 0.3
SHANK2-210ENST00000449116 SLC38A10Q9HBR0 1119 aa16.93■□□□□ 0.3
SHANK2-210ENST00000449116 CTDP1Q9Y5B0 961 aaPredicted RBP16.93■□□□□ 0.3
SHANK2-210ENST00000449116 PARP14Q460N5 1801 aa16.93■□□□□ 0.3
SHANK2-210ENST00000449116 RLFQ13129 1914 aa16.92■□□□□ 0.3
SHANK2-210ENST00000449116 AOC2O75106 756 aa16.92■□□□□ 0.3
SHANK2-210ENST00000449116 SCG2P13521 617 aa16.92■□□□□ 0.3
SHANK2-210ENST00000449116 VEGFBP49765 207 aa16.92■□□□□ 0.3
SHANK2-210ENST00000449116 SNAP25P60880 206 aa16.92■□□□□ 0.3
SHANK2-210ENST00000449116 HERVK_113P62684 666 aa16.92■□□□□ 0.3
SHANK2-210ENST00000449116 PKN1Q16512 942 aa16.92■□□□□ 0.3
SHANK2-210ENST00000449116 PFKFB3Q16875 520 aaPredicted RBP16.92■□□□□ 0.3
SHANK2-210ENST00000449116 MB21D1Q8N884 522 aa16.92■□□□□ 0.3
SHANK2-210ENST00000449116 GTF3C2Q8WUA4 911 aaPredicted RBP16.92■□□□□ 0.3
SHANK2-210ENST00000449116 KIF3AQ9Y496 699 aa16.92■□□□□ 0.3
SHANK2-210ENST00000449116 BAZ2BQ9UIF8 2168 aaKnown RBP16.91■□□□□ 0.3
SHANK2-210ENST00000449116 hCG_1984214I3L0E3 225 aa16.91■□□□□ 0.3
SHANK2-210ENST00000449116 CYP2C8P10632 490 aa16.91■□□□□ 0.3
SHANK2-210ENST00000449116 MAP2K2P36507 400 aa16.91■□□□□ 0.3
SHANK2-210ENST00000449116 CCDC174Q6PII3 467 aa16.91■□□□□ 0.3
SHANK2-210ENST00000449116 ZNF713Q8N859 430 aaPredicted RBP16.91■□□□□ 0.3
SHANK2-210ENST00000449116 REPS2Q8NFH8 660 aa16.91■□□□□ 0.3
SHANK2-210ENST00000449116 SMCR8Q8TEV9 937 aaPredicted RBP16.91■□□□□ 0.3
SHANK2-210ENST00000449116 AMNQ9BXJ7 453 aa16.91■□□□□ 0.3
SHANK2-210ENST00000449116 ICAM1P05362 532 aa16.9■□□□□ 0.3
SHANK2-210ENST00000449116 OAZ1P54368 228 aa16.9■□□□□ 0.3
SHANK2-210ENST00000449116 FBXO11Q86XK2 927 aa16.9■□□□□ 0.3
SHANK2-210ENST00000449116 ALG1Q9BT22 464 aa16.9■□□□□ 0.3
SHANK2-210ENST00000449116 CWC22Q9HCG8 908 aaKnown RBP16.9■□□□□ 0.3
SHANK2-210ENST00000449116 PNMA2Q9UL42 364 aa16.9■□□□□ 0.3
SHANK2-210ENST00000449116 ZNF536O15090 1300 aa16.9■□□□□ 0.3
SHANK2-210ENST00000449116 ATP2A1O14983 1001 aa16.89■□□□□ 0.29
SHANK2-210ENST00000449116 PPP1R11O60927 126 aaPredicted RBP16.89■□□□□ 0.29
SHANK2-210ENST00000449116 TRAF1Q13077 416 aa16.89■□□□□ 0.29
SHANK2-210ENST00000449116 TAF1CQ15572 869 aaPredicted RBP16.89■□□□□ 0.29
SHANK2-210ENST00000449116 WWC2Q6AWC2 1192 aa16.89■□□□□ 0.29
SHANK2-210ENST00000449116 HEATR3Q7Z4Q2 680 aa16.89■□□□□ 0.29
SHANK2-210ENST00000449116 CPXCR1Q8N123 301 aa16.89■□□□□ 0.29
SHANK2-210ENST00000449116 GPKOWQ92917 476 aaPredicted RBP eCLIP16.89■□□□□ 0.29
SHANK2-210ENST00000449116 AIFM3Q96NN9 605 aa16.89■□□□□ 0.29
SHANK2-210ENST00000449116 RAVER2Q9HCJ3 691 aaKnown RBP16.89■□□□□ 0.29
SHANK2-210ENST00000449116 BARHL2Q9NY43 387 aa16.89■□□□□ 0.29
SHANK2-210ENST00000449116 ZNF214Q9UL59 606 aaPredicted RBP16.89■□□□□ 0.29
SHANK2-210ENST00000449116 A0A0G2JMZ2 1700 aa16.89■□□□□ 0.29
SHANK2-210ENST00000449116 CEP350Q5VT06 3117 aa16.89■□□□□ 0.29
SHANK2-210ENST00000449116 ALDH1A1P00352 501 aa16.88■□□□□ 0.29
SHANK2-210ENST00000449116 XBP1P17861 261 aa16.88■□□□□ 0.29
SHANK2-210ENST00000449116 PDCP20941 246 aa16.88■□□□□ 0.29
SHANK2-210ENST00000449116 GCLCP48506 637 aaPredicted RBP16.88■□□□□ 0.29
SHANK2-210ENST00000449116 TMEM132BQ14DG7 1078 aa16.88■□□□□ 0.29
SHANK2-210ENST00000449116 POTEEQ6S8J3 1075 aa16.88■□□□□ 0.29
SHANK2-210ENST00000449116 PAGR1Q9BTK6 254 aa16.88■□□□□ 0.29
SHANK2-210ENST00000449116 TEX13BQ9BXU2 312 aa16.88■□□□□ 0.29
SHANK2-210ENST00000449116 SH3GLB2Q9NR46 395 aa16.88■□□□□ 0.29
SHANK2-210ENST00000449116 VPS54Q9P1Q0 977 aa16.88■□□□□ 0.29
SHANK2-210ENST00000449116 CCPG1Q9ULG6 757 aa16.88■□□□□ 0.29
SHANK2-210ENST00000449116 RABGAP1Q9Y3P9 1069 aa16.88■□□□□ 0.29
SHANK2-210ENST00000449116 PCDHA1Q9Y5I3 950 aa16.88■□□□□ 0.29
SHANK2-210ENST00000449116 STXBP3O00186 592 aa16.87■□□□□ 0.29
SHANK2-210ENST00000449116 CNMDO75829 334 aa16.87■□□□□ 0.29
SHANK2-210ENST00000449116 STAT3P40763 770 aa16.87■□□□□ 0.29
SHANK2-210ENST00000449116 USH1GQ495M9 461 aa16.87■□□□□ 0.29
SHANK2-210ENST00000449116 LARP1BQ659C4 914 aaKnown RBP16.87■□□□□ 0.29
SHANK2-210ENST00000449116 PPP1R18Q6NYC8 613 aa16.87■□□□□ 0.29
SHANK2-210ENST00000449116 FAM177A1Q8N128 213 aaPredicted RBP16.87■□□□□ 0.29
SHANK2-210ENST00000449116 CCDC148Q8NFR7 591 aa16.87■□□□□ 0.29
SHANK2-210ENST00000449116 CCDC12Q8WUD4 166 aaPredicted RBP16.87■□□□□ 0.29
SHANK2-210ENST00000449116 COA7Q96BR5 231 aa16.87■□□□□ 0.29
SHANK2-210ENST00000449116 C8orf76Q96K31 380 aa16.87■□□□□ 0.29
SHANK2-210ENST00000449116 AGBL1Q96MI9 1066 aa16.87■□□□□ 0.29
SHANK2-210ENST00000449116 ZFYVE28Q9HCC9 887 aa16.87■□□□□ 0.29
SHANK2-210ENST00000449116 TXNRD2Q9NNW7 524 aa16.87■□□□□ 0.29
SHANK2-210ENST00000449116 BTBD7Q9P203 1132 aa16.87■□□□□ 0.29
SHANK2-210ENST00000449116 RBPJLQ9UBG7 517 aa16.87■□□□□ 0.29
SHANK2-210ENST00000449116 MYH6P13533 1939 aa16.87■□□□□ 0.29
SHANK2-210ENST00000449116 THSD7BQ9C0I4 1608 aa16.87■□□□□ 0.29
SHANK2-210ENST00000449116 NAPAP54920 295 aa16.86■□□□□ 0.29
SHANK2-210ENST00000449116 TRIM29Q14134 588 aa16.86■□□□□ 0.29
SHANK2-210ENST00000449116 PLS1Q14651 629 aa16.86■□□□□ 0.29
SHANK2-210ENST00000449116 SNRNP48Q6IEG0 339 aaKnown RBP16.86■□□□□ 0.29
SHANK2-210ENST00000449116 TYW1BQ6NUM6 668 aa16.86■□□□□ 0.29
SHANK2-210ENST00000449116 RGS22Q8NE09 1264 aa16.86■□□□□ 0.29
SHANK2-210ENST00000449116 SPATC1LQ9H0A9 340 aa16.86■□□□□ 0.29
SHANK2-210ENST00000449116 ABCB11O95342 1321 aa16.86■□□□□ 0.29
SHANK2-210ENST00000449116 ADGRA2Q96PE1 1338 aa16.86■□□□□ 0.29
SHANK2-210ENST00000449116 CA12O43570 354 aa16.85■□□□□ 0.29
SHANK2-210ENST00000449116 TAL1P17542 331 aaPredicted RBP16.85■□□□□ 0.29
SHANK2-210ENST00000449116 FOSBP53539 338 aa16.85■□□□□ 0.29
SHANK2-210ENST00000449116 ERVK-9P63128 1117 aa16.85■□□□□ 0.29
SHANK2-210ENST00000449116 ERVK-24P63145 666 aa16.85■□□□□ 0.29
SHANK2-210ENST00000449116 TKFCQ3LXA3 575 aa16.85■□□□□ 0.29
SHANK2-210ENST00000449116 RIOX2Q8IUF8 465 aa16.85■□□□□ 0.29
SHANK2-210ENST00000449116 ANKRD13CQ8N6S4 541 aa16.85■□□□□ 0.29
SHANK2-210ENST00000449116 GPRC5AQ8NFJ5 357 aa16.85■□□□□ 0.29
SHANK2-210ENST00000449116 FBXO18Q8NFZ0 1043 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms