RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 IER2Q9BTL4 223 aa6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 ZSWIM5Q9P217 1185 aa6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 MRPS23Q9Y3D9 190 aaKnown RBP6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 H3BS24 57 aa6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 VAMP4O75379 141 aa6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 CPP00450 1065 aa6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 SCG5P05408 212 aa6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 SNRPB2P08579 225 aaKnown RBP6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 NCLP19338 710 aaKnown RBP6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 GFRA1P56159 465 aa6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 SUMO1P63165 101 aaKnown RBP6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 MAP4K2Q12851 820 aa6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 GAB4Q2WGN9 574 aa6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 TMPRSS7Q7RTY8 843 aa6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 KCTD13Q8WZ19 329 aa6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 UBE2FQ969M7 185 aa6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 TMX1Q9H3N1 280 aa6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 SEMA3GQ9NS98 782 aa6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 ZC3H7BQ9UGR2 993 aaKnown RBP6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 GPR55Q9Y2T6 319 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 PITPNM2Q9BZ72 1349 aa6.29□□□□□ -1.4
HMGB1P16-201ENST00000447155 DLX3O60479 287 aa6.29□□□□□ -1.4
HMGB1P16-201ENST00000447155 CD3EP07766 207 aa6.29□□□□□ -1.4
HMGB1P16-201ENST00000447155 VAV1P15498 845 aa6.29□□□□□ -1.4
HMGB1P16-201ENST00000447155 KCNJ6P48051 423 aa6.29□□□□□ -1.4
HMGB1P16-201ENST00000447155 PCBP3P57721 371 aaKnown RBP6.29□□□□□ -1.4
HMGB1P16-201ENST00000447155 DPY19L1Q2PZI1 675 aa6.29□□□□□ -1.4
HMGB1P16-201ENST00000447155 TKFCQ3LXA3 575 aa6.29□□□□□ -1.4
HMGB1P16-201ENST00000447155 USHBP1Q8N6Y0 703 aa6.29□□□□□ -1.4
HMGB1P16-201ENST00000447155 LINC00116Q8NCU8 138 aa6.29□□□□□ -1.4
HMGB1P16-201ENST00000447155 NCOA5Q9HCD5 579 aaKnown RBP6.29□□□□□ -1.4
HMGB1P16-201ENST00000447155 RNF112Q9ULX5 631 aa6.29□□□□□ -1.4
HMGB1P16-201ENST00000447155 BACE2Q9Y5Z0 518 aa6.29□□□□□ -1.4
HMGB1P16-201ENST00000447155 SSU72P8A0A1W2PR75 194 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 STXBP3O00186 592 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 PLD2O14939 933 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 AURKAO14965 403 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 PPP1R12AO14974 1030 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 ZNF205O95201 554 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 TGFB1P01137 390 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 SYPP08247 313 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 ENDOUP21128 410 aaKnown RBP6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 GYS2P54840 703 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 RNF187Q5TA31 235 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 RNF111Q6ZNA4 994 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 HRASLS5Q96KN8 279 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 FCRL3Q96P31 734 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 SLC12A9Q9BXP2 914 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 MRPL4Q9BYD3 311 aaKnown RBP6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 DUSP13Q9UII6 198 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 PLAAQ9Y263 795 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 PRKAB1Q9Y478 270 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 CD2APQ9Y5K6 639 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 WASH4PA8MWX3 477 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 RFPL3O75679 317 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 CENPBP07199 599 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 FURINP09958 794 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 LTKP29376 864 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 HOXA10P31260 410 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 GRIK1P39086 918 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 ECI1P42126 302 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 SCRN1Q12765 414 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 SF1Q15637 639 aaKnown RBP6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 FNDC3BQ53EP0 1204 aaKnown RBP6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 PRSS36Q5K4E3 855 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 SLC35F1Q5T1Q4 408 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 INTS5Q6P9B9 1019 aaKnown RBP6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 CREG2Q8IUH2 290 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 TMEM145Q8NBT3 493 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 ASB11Q8WXH4 323 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 COPS5Q92905 334 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 MISP3Q96FF7 219 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 C1orf159Q96HA4 380 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 MCMBPQ9BTE3 642 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 PCGF6Q9BYE7 350 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 ATP13A1Q9HD20 1204 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 VAV3Q9UKW4 847 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 TCFL5Q9UL49 500 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 C2orf71A6NGG8 1288 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 IFNGR1P15260 489 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 SEPHS1P49903 392 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 PRKCQQ04759 706 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 CYP4F3Q08477 520 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 PABPC4Q13310 644 aaKnown RBP eCLIP6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 AOC3Q16853 763 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 MSMPQ1L6U9 139 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 DALRD3Q5D0E6 543 aaKnown RBP6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 RTP2Q5QGT7 225 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 EEF1DP3Q658K8 133 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 RCSD1Q6JBY9 416 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 STK11IPQ8N1F8 1099 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 KREMEN2Q8NCW0 462 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 FOXP3Q9BZS1 431 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 SEMA6BQ9H3T3 888 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 PCDHA11Q9Y5I1 949 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 RAPGEF3O95398 923 aa6.25□□□□□ -1.41
HMGB1P16-201ENST00000447155 ESR1P03372 595 aa6.25□□□□□ -1.41
HMGB1P16-201ENST00000447155 THBDP07204 575 aa6.25□□□□□ -1.41
HMGB1P16-201ENST00000447155 GSTM1P09488 218 aa6.25□□□□□ -1.41
HMGB1P16-201ENST00000447155 C6orf222P0C671 652 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms