RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 PLIN1O60240 522 aa9.21□□□□□ -0.94
SSXP3-201ENST00000442971 B4GALT4O60513 344 aa9.21□□□□□ -0.94
SSXP3-201ENST00000442971 GJB5O95377 273 aa9.21□□□□□ -0.94
SSXP3-201ENST00000442971 ARP10275 920 aa9.21□□□□□ -0.94
SSXP3-201ENST00000442971 AOC1P19801 751 aa9.21□□□□□ -0.94
SSXP3-201ENST00000442971 RFC2P35250 354 aa9.21□□□□□ -0.94
SSXP3-201ENST00000442971 RRP1P56182 461 aaKnown RBP9.21□□□□□ -0.94
SSXP3-201ENST00000442971 GPM6BQ13491 265 aa9.21□□□□□ -0.94
SSXP3-201ENST00000442971 CWF19L1Q69YN2 538 aaKnown RBP9.21□□□□□ -0.94
SSXP3-201ENST00000442971 MAMSTRQ6ZN01 415 aa9.21□□□□□ -0.94
SSXP3-201ENST00000442971 SMRP1Q8NCR6 262 aa9.21□□□□□ -0.94
SSXP3-201ENST00000442971 FLCNQ8NFG4 579 aa9.21□□□□□ -0.94
SSXP3-201ENST00000442971 INCENPQ9NQS7 918 aa9.21□□□□□ -0.94
SSXP3-201ENST00000442971 CACNA2D2Q9NY47 1150 aa9.21□□□□□ -0.94
SSXP3-201ENST00000442971 SPTA1P02549 2419 aa9.21□□□□□ -0.94
SSXP3-201ENST00000442971 WDFY3Q8IZQ1 3526 aa9.21□□□□□ -0.94
SSXP3-201ENST00000442971 TET1Q8NFU7 2136 aa9.2□□□□□ -0.94
SSXP3-201ENST00000442971 DMXL2Q8TDJ6 3036 aa9.2□□□□□ -0.94
SSXP3-201ENST00000442971 ABCA12Q86UK0 2595 aa9.2□□□□□ -0.94
SSXP3-201ENST00000442971 MYO10Q9HD67 2058 aa9.2□□□□□ -0.94
SSXP3-201ENST00000442971 FAM196BA6NMK8 535 aa9.2□□□□□ -0.94
SSXP3-201ENST00000442971 LINC01565O15544 149 aa9.2□□□□□ -0.94
SSXP3-201ENST00000442971 TBC1D12O60347 775 aa9.2□□□□□ -0.94
SSXP3-201ENST00000442971 BRD1O95696 1058 aa9.2□□□□□ -0.94
SSXP3-201ENST00000442971 CAP2P40123 477 aa9.2□□□□□ -0.94
SSXP3-201ENST00000442971 WDR5P61964 334 aaKnown RBP9.2□□□□□ -0.94
SSXP3-201ENST00000442971 MTMR3Q13615 1198 aa9.2□□□□□ -0.94
SSXP3-201ENST00000442971 EPC2Q52LR7 807 aa9.2□□□□□ -0.94
SSXP3-201ENST00000442971 HYPKQ9NX55 129 aa9.2□□□□□ -0.94
SSXP3-201ENST00000442971 USP18Q9UMW8 372 aa9.2□□□□□ -0.94
SSXP3-201ENST00000442971 TRIM35Q9UPQ4 493 aa9.2□□□□□ -0.94
SSXP3-201ENST00000442971 USP15Q9Y4E8 981 aaPredicted RBP9.2□□□□□ -0.94
SSXP3-201ENST00000442971 TEX15Q9BXT5 2789 aa9.2□□□□□ -0.94
SSXP3-201ENST00000442971 ADAMTS20P59510 1910 aa9.19□□□□□ -0.94
SSXP3-201ENST00000442971 ATG2AQ2TAZ0 1938 aa9.19□□□□□ -0.94
SSXP3-201ENST00000442971 USP17L10C9JJH3 530 aa9.19□□□□□ -0.94
SSXP3-201ENST00000442971 DUSP11O75319 330 aaKnown RBP9.19□□□□□ -0.94
SSXP3-201ENST00000442971 FRAT2O75474 233 aaPredicted RBP9.19□□□□□ -0.94
SSXP3-201ENST00000442971 GTF2F1P35269 517 aaKnown RBP eCLIP9.19□□□□□ -0.94
SSXP3-201ENST00000442971 NDUFV1P49821 464 aa9.19□□□□□ -0.94
SSXP3-201ENST00000442971 DEFB103AP81534 67 aa9.19□□□□□ -0.94
SSXP3-201ENST00000442971 GOLGA2Q08379 1002 aa9.19□□□□□ -0.94
SSXP3-201ENST00000442971 ADAM15Q13444 863 aa9.19□□□□□ -0.94
SSXP3-201ENST00000442971 GNASQ5JWF2 1037 aa9.19□□□□□ -0.94
SSXP3-201ENST00000442971 TINF2Q9BSI4 451 aa9.19□□□□□ -0.94
SSXP3-201ENST00000442971 IDI2Q9BXS1 227 aa9.19□□□□□ -0.94
SSXP3-201ENST00000442971 IGFLR1Q9H665 355 aa9.19□□□□□ -0.94
SSXP3-201ENST00000442971 SPC25Q9HBM1 224 aa9.19□□□□□ -0.94
SSXP3-201ENST00000442971 FAM184BQ9ULE4 1060 aa9.19□□□□□ -0.94
SSXP3-201ENST00000442971 SORCS3Q9UPU3 1222 aa9.19□□□□□ -0.94
SSXP3-201ENST00000442971 ZNFX1Q9P2E3 1918 aaKnown RBP9.18□□□□□ -0.94
SSXP3-201ENST00000442971 MYO9AB2RTY4 2548 aa9.18□□□□□ -0.94
SSXP3-201ENST00000442971 ITGA7Q13683 1181 aa9.18□□□□□ -0.94
SSXP3-201ENST00000442971 RRP1BQ14684 758 aaKnown RBP9.18□□□□□ -0.94
SSXP3-201ENST00000442971 LBX2Q6XYB7 198 aa9.18□□□□□ -0.94
SSXP3-201ENST00000442971 NETO1Q8TDF5 533 aa9.18□□□□□ -0.94
SSXP3-201ENST00000442971 RIN2Q8WYP3 895 aaPredicted RBP9.18□□□□□ -0.94
SSXP3-201ENST00000442971 SECISBP2LQ93073 1101 aaKnown RBP9.18□□□□□ -0.94
SSXP3-201ENST00000442971 CDCA7LQ96GN5 454 aa9.18□□□□□ -0.94
SSXP3-201ENST00000442971 SAMD11Q96NU1 681 aa9.18□□□□□ -0.94
SSXP3-201ENST00000442971 RTP3Q9BQQ7 232 aa9.18□□□□□ -0.94
SSXP3-201ENST00000442971 MOV10L1Q9BXT6 1211 aaKnown RBP9.18□□□□□ -0.94
SSXP3-201ENST00000442971 CIZ1Q9ULV3 898 aaPredicted RBP9.18□□□□□ -0.94
SSXP3-201ENST00000442971 ANKRD18BA2A2Z9 1011 aa9.17□□□□□ -0.94
SSXP3-201ENST00000442971 USP17L15C9J2P7 530 aa9.17□□□□□ -0.94
SSXP3-201ENST00000442971 USP17L13C9JLJ4 530 aa9.17□□□□□ -0.94
SSXP3-201ENST00000442971 USP17L11C9JVI0 530 aa9.17□□□□□ -0.94
SSXP3-201ENST00000442971 USP17L18D6R9N7 530 aa9.17□□□□□ -0.94
SSXP3-201ENST00000442971 USP17L22D6RA61 530 aa9.17□□□□□ -0.94
SSXP3-201ENST00000442971 USP17L17D6RBQ6 530 aa9.17□□□□□ -0.94
SSXP3-201ENST00000442971 USP17L19D6RCP7 530 aa9.17□□□□□ -0.94
SSXP3-201ENST00000442971 USP17L20D6RJB6 530 aa9.17□□□□□ -0.94
SSXP3-201ENST00000442971 KINO60870 393 aaKnown RBP9.17□□□□□ -0.94
SSXP3-201ENST00000442971 TGM1P22735 817 aa9.17□□□□□ -0.94
SSXP3-201ENST00000442971 USP17L24Q0WX57 530 aa9.17□□□□□ -0.94
SSXP3-201ENST00000442971 COASYQ13057 564 aa9.17□□□□□ -0.94
SSXP3-201ENST00000442971 DIXDC1Q155Q3 683 aa9.17□□□□□ -0.94
SSXP3-201ENST00000442971 HDGFL1Q5TGJ6 251 aa9.17□□□□□ -0.94
SSXP3-201ENST00000442971 PDZD3Q86UT5 571 aa9.17□□□□□ -0.94
SSXP3-201ENST00000442971 VPS37DQ86XT2 251 aa9.17□□□□□ -0.94
SSXP3-201ENST00000442971 ABRAQ8N0Z2 381 aa9.17□□□□□ -0.94
SSXP3-201ENST00000442971 DDX1Q92499 740 aaKnown RBP9.17□□□□□ -0.94
SSXP3-201ENST00000442971 BBC3Q96PG8 261 aaPredicted RBP9.17□□□□□ -0.94
SSXP3-201ENST00000442971 SEZ6LQ9BYH1 1024 aa9.17□□□□□ -0.94
SSXP3-201ENST00000442971 EMILIN3Q9NT22 766 aa9.17□□□□□ -0.94
SSXP3-201ENST00000442971 CNPY2Q9Y2B0 182 aa9.17□□□□□ -0.94
SSXP3-201ENST00000442971 GRIN2DO15399 1336 aa9.17□□□□□ -0.94
SSXP3-201ENST00000442971 SEC24BO95487 1268 aa9.16□□□□□ -0.94
SSXP3-201ENST00000442971 CSF1RP07333 972 aa9.16□□□□□ -0.94
SSXP3-201ENST00000442971 SP9P0CG40 484 aa9.16□□□□□ -0.94
SSXP3-201ENST00000442971 CYP2C9P11712 490 aa9.16□□□□□ -0.94
SSXP3-201ENST00000442971 ATF7P17544 494 aaPredicted RBP9.16□□□□□ -0.94
SSXP3-201ENST00000442971 ERCC3P19447 782 aa9.16□□□□□ -0.94
SSXP3-201ENST00000442971 GJA9P57773 515 aa9.16□□□□□ -0.94
SSXP3-201ENST00000442971 UBE4AQ14139 1066 aa9.16□□□□□ -0.94
SSXP3-201ENST00000442971 FAM117BQ6P1L5 589 aa9.16□□□□□ -0.94
SSXP3-201ENST00000442971 GLIS3Q8NEA6 775 aa9.16□□□□□ -0.94
SSXP3-201ENST00000442971 UPF3AQ9H1J1 476 aaKnown RBP9.16□□□□□ -0.94
SSXP3-201ENST00000442971 SMOC2Q9H3U7 446 aa9.16□□□□□ -0.94
SSXP3-201ENST00000442971 MBIPQ9NS73 344 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms