RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 ADAMTS5Q9UNA0 930 aa24.31■■□□□ 1.48
VPS13B-204ENST00000441350 KCNJ14Q9UNX9 436 aa24.31■■□□□ 1.48
VPS13B-204ENST00000441350 MYPNQ86TC9 1320 aa24.3■■□□□ 1.48
VPS13B-204ENST00000441350 CETPP11597 493 aa24.3■■□□□ 1.48
VPS13B-204ENST00000441350 DSG3P32926 999 aa24.3■■□□□ 1.48
VPS13B-204ENST00000441350 HHIPL1Q96JK4 782 aa24.3■■□□□ 1.48
VPS13B-204ENST00000441350 MMP1P03956 469 aa24.29■■□□□ 1.48
VPS13B-204ENST00000441350 FDX1P10109 184 aa24.29■■□□□ 1.48
VPS13B-204ENST00000441350 MKRN3Q13064 507 aaKnown RBP24.29■■□□□ 1.48
VPS13B-204ENST00000441350 AMNQ9BXJ7 453 aa24.29■■□□□ 1.48
VPS13B-204ENST00000441350 SLC38A10Q9HBR0 1119 aa24.29■■□□□ 1.48
VPS13B-204ENST00000441350 F13A1P00488 732 aa24.28■■□□□ 1.48
VPS13B-204ENST00000441350 NPY5RQ15761 445 aa24.28■■□□□ 1.48
VPS13B-204ENST00000441350 FOXD4L5Q5VV16 416 aaPredicted RBP24.28■■□□□ 1.48
VPS13B-204ENST00000441350 SAMD1Q6SPF0 538 aaPredicted RBP24.28■■□□□ 1.48
VPS13B-204ENST00000441350 FBXO11Q86XK2 927 aa24.28■■□□□ 1.48
VPS13B-204ENST00000441350 CCDC148Q8NFR7 591 aa24.28■■□□□ 1.48
VPS13B-204ENST00000441350 FOXD4L4Q8WXT5 416 aaPredicted RBP24.28■■□□□ 1.48
VPS13B-204ENST00000441350 COA7Q96BR5 231 aa24.28■■□□□ 1.48
VPS13B-204ENST00000441350 ATG4CQ96DT6 458 aa24.28■■□□□ 1.48
VPS13B-204ENST00000441350 HOXC10Q9NYD6 342 aa24.28■■□□□ 1.48
VPS13B-204ENST00000441350 VWA5AO00534 786 aa24.28■■□□□ 1.48
VPS13B-204ENST00000441350 NAPAP54920 295 aa24.28■■□□□ 1.48
VPS13B-204ENST00000441350 PPP1R18Q6NYC8 613 aa24.28■■□□□ 1.48
VPS13B-204ENST00000441350 CCDC12Q8WUD4 166 aaPredicted RBP24.28■■□□□ 1.48
VPS13B-204ENST00000441350 BRI3BPQ8WY22 251 aa24.28■■□□□ 1.48
VPS13B-204ENST00000441350 ABT1Q9ULW3 272 aaKnown RBP24.28■■□□□ 1.48
VPS13B-204ENST00000441350 CCL15-CCL14A0A0B4J2E2 113 aa24.27■■□□□ 1.48
VPS13B-204ENST00000441350 SLC10A3P09131 477 aa24.27■■□□□ 1.48
VPS13B-204ENST00000441350 CCL15Q16663 113 aa24.27■■□□□ 1.48
VPS13B-204ENST00000441350 ZMYND12Q9H0C1 365 aa24.27■■□□□ 1.48
VPS13B-204ENST00000441350 PCDHA1Q9Y5I3 950 aa24.27■■□□□ 1.48
VPS13B-204ENST00000441350 ZNF536O15090 1300 aa24.27■■□□□ 1.48
VPS13B-204ENST00000441350 ESYT2A0FGR8 921 aa24.26■■□□□ 1.47
VPS13B-204ENST00000441350 SPDYE16A6NNV3 312 aaPredicted RBP24.26■■□□□ 1.47
VPS13B-204ENST00000441350 CALML3P27482 149 aa24.26■■□□□ 1.47
VPS13B-204ENST00000441350 NLRP5P59047 1200 aa24.26■■□□□ 1.47
VPS13B-204ENST00000441350 KIF23Q02241 960 aaPredicted RBP24.26■■□□□ 1.47
VPS13B-204ENST00000441350 TRAF1Q13077 416 aa24.26■■□□□ 1.47
VPS13B-204ENST00000441350 RESTQ13127 1097 aa24.26■■□□□ 1.47
VPS13B-204ENST00000441350 PABPC4Q13310 644 aaKnown RBP eCLIP24.26■■□□□ 1.47
VPS13B-204ENST00000441350 CCDC174Q6PII3 467 aa24.26■■□□□ 1.47
VPS13B-204ENST00000441350 FERMT3Q86UX7 667 aa24.26■■□□□ 1.47
VPS13B-204ENST00000441350 REPS2Q8NFH8 660 aa24.26■■□□□ 1.47
VPS13B-204ENST00000441350 ASCC2Q9H1I8 757 aaPredicted RBP24.26■■□□□ 1.47
VPS13B-204ENST00000441350 TESPA1A2RU30 521 aaPredicted RBP24.25■■□□□ 1.47
VPS13B-204ENST00000441350 FAM155AB1AL88 458 aaPredicted RBP24.25■■□□□ 1.47
VPS13B-204ENST00000441350 ZBED4O75132 1171 aa24.25■■□□□ 1.47
VPS13B-204ENST00000441350 ICAM1P05362 532 aa24.25■■□□□ 1.47
VPS13B-204ENST00000441350 SAFBQ15424 915 aaKnown RBP eCLIP24.25■■□□□ 1.47
VPS13B-204ENST00000441350 MCTP1Q6DN14 999 aa24.25■■□□□ 1.47
VPS13B-204ENST00000441350 GALNT17Q6IS24 598 aa24.25■■□□□ 1.47
VPS13B-204ENST00000441350 CCDC102AQ96A19 550 aa24.25■■□□□ 1.47
VPS13B-204ENST00000441350 SLC45A1Q9Y2W3 748 aa24.25■■□□□ 1.47
VPS13B-204ENST00000441350 SMCHD1A6NHR9 2005 aa24.25■■□□□ 1.47
VPS13B-204ENST00000441350 COL11A1P12107 1806 aaPredicted RBP24.25■■□□□ 1.47
VPS13B-204ENST00000441350 U2AF2P26368 475 aaKnown RBP eCLIP24.24■■□□□ 1.47
VPS13B-204ENST00000441350 LBX2Q6XYB7 198 aa24.24■■□□□ 1.47
VPS13B-204ENST00000441350 DIS3L2Q8IYB7 885 aaKnown RBP24.24■■□□□ 1.47
VPS13B-204ENST00000441350 DAGLBQ8NCG7 672 aa24.24■■□□□ 1.47
VPS13B-204ENST00000441350 TNPO1Q92973 898 aaKnown RBP24.24■■□□□ 1.47
VPS13B-204ENST00000441350 P2RX7Q99572 595 aaKnown RBP24.24■■□□□ 1.47
VPS13B-204ENST00000441350 ZSCAN16Q9H4T2 348 aaPredicted RBP24.24■■□□□ 1.47
VPS13B-204ENST00000441350 PCDHA4Q9UN74 947 aa24.24■■□□□ 1.47
VPS13B-204ENST00000441350 A0A0G2JMZ2 1700 aa24.24■■□□□ 1.47
VPS13B-204ENST00000441350 SMCO2A6NFE2 343 aa24.24■■□□□ 1.47
VPS13B-204ENST00000441350 BTBD18B2RXH4 712 aa24.24■■□□□ 1.47
VPS13B-204ENST00000441350 KIF28PB7ZC32 967 aa24.24■■□□□ 1.47
VPS13B-204ENST00000441350 BTBD19C9JJ37 291 aa24.24■■□□□ 1.47
VPS13B-204ENST00000441350 OAZ1P54368 228 aa24.24■■□□□ 1.47
VPS13B-204ENST00000441350 IRX3P78415 501 aaPredicted RBP24.24■■□□□ 1.47
VPS13B-204ENST00000441350 POTEEQ6S8J3 1075 aa24.24■■□□□ 1.47
VPS13B-204ENST00000441350 ANKRD23Q86SG2 305 aa24.24■■□□□ 1.47
VPS13B-204ENST00000441350 OXER1Q8TDS5 423 aa24.24■■□□□ 1.47
VPS13B-204ENST00000441350 FOXP1Q9H334 677 aaPredicted RBP24.24■■□□□ 1.47
VPS13B-204ENST00000441350 ADAMTS3O15072 1205 aa24.23■■□□□ 1.47
VPS13B-204ENST00000441350 OSBPP22059 807 aa24.23■■□□□ 1.47
VPS13B-204ENST00000441350 KRT2P35908 639 aa24.23■■□□□ 1.47
VPS13B-204ENST00000441350 APLP1P51693 650 aa24.23■■□□□ 1.47
VPS13B-204ENST00000441350 USH1GQ495M9 461 aa24.23■■□□□ 1.47
VPS13B-204ENST00000441350 AGBL1Q96MI9 1066 aa24.23■■□□□ 1.47
VPS13B-204ENST00000441350 C6orf50Q9HD87 102 aa24.23■■□□□ 1.47
VPS13B-204ENST00000441350 PNMA2Q9UL42 364 aa24.23■■□□□ 1.47
VPS13B-204ENST00000441350 MANSC4A6NHS7 340 aaPredicted RBP24.22■■□□□ 1.47
VPS13B-204ENST00000441350 ATP2A1O14983 1001 aa24.22■■□□□ 1.47
VPS13B-204ENST00000441350 TAL1P17542 331 aaPredicted RBP24.22■■□□□ 1.47
VPS13B-204ENST00000441350 GNA11P29992 359 aa24.22■■□□□ 1.47
VPS13B-204ENST00000441350 BLIDQ8IZY5 108 aa24.22■■□□□ 1.47
VPS13B-204ENST00000441350 PTPN18Q99952 460 aa24.22■■□□□ 1.47
VPS13B-204ENST00000441350 RAVER2Q9HCJ3 691 aaKnown RBP24.22■■□□□ 1.47
VPS13B-204ENST00000441350 BRMS1Q9HCU9 246 aa24.22■■□□□ 1.47
VPS13B-204ENST00000441350 RIC8AQ9NPQ8 531 aa24.22■■□□□ 1.47
VPS13B-204ENST00000441350 CREBZFQ9NS37 354 aa24.22■■□□□ 1.47
VPS13B-204ENST00000441350 ZNF214Q9UL59 606 aaPredicted RBP24.22■■□□□ 1.47
VPS13B-204ENST00000441350 M0R2N6 131 aa24.21■■□□□ 1.47
VPS13B-204ENST00000441350 HERVK_113P62684 666 aa24.21■■□□□ 1.47
VPS13B-204ENST00000441350 NR5A1Q13285 461 aa24.21■■□□□ 1.47
VPS13B-204ENST00000441350 TMEM132BQ14DG7 1078 aa24.21■■□□□ 1.47
VPS13B-204ENST00000441350 BRAPQ7Z569 592 aa24.21■■□□□ 1.47
VPS13B-204ENST00000441350 CPXCR1Q8N123 301 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms