RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 SMIM5Q71RC9 77 aa9.1□□□□□ -0.95
VTI1A-202ENST00000432306 GOLGA6L1Q8N7Z2 621 aa9.1□□□□□ -0.95
VTI1A-202ENST00000432306 LINC00116Q8NCU8 138 aa9.1□□□□□ -0.95
VTI1A-202ENST00000432306 PIGBQ92521 554 aa9.1□□□□□ -0.95
VTI1A-202ENST00000432306 C8orf76Q96K31 380 aa9.1□□□□□ -0.95
VTI1A-202ENST00000432306 METTL22Q9BUU2 404 aaPredicted RBP9.1□□□□□ -0.95
VTI1A-202ENST00000432306 GBP3Q9H0R5 595 aa9.1□□□□□ -0.95
VTI1A-202ENST00000432306 ANKZF1Q9H8Y5 726 aa9.1□□□□□ -0.95
VTI1A-202ENST00000432306 MED4Q9NPJ6 270 aa9.1□□□□□ -0.95
VTI1A-202ENST00000432306 RSPH14Q9UHP6 348 aa9.1□□□□□ -0.95
VTI1A-202ENST00000432306 CDC23Q9UJX2 597 aa9.1□□□□□ -0.95
VTI1A-202ENST00000432306 LAMA4Q16363 1823 aa9.09□□□□□ -0.95
VTI1A-202ENST00000432306 KDM6AO15550 1401 aaPredicted RBP9.09□□□□□ -0.95
VTI1A-202ENST00000432306 ARHGAP33O14559 1287 aa9.09□□□□□ -0.95
VTI1A-202ENST00000432306 CYP27B1O15528 508 aa9.09□□□□□ -0.95
VTI1A-202ENST00000432306 GPR37L1O60883 481 aa9.09□□□□□ -0.95
VTI1A-202ENST00000432306 SERPINC1P01008 464 aa9.09□□□□□ -0.95
VTI1A-202ENST00000432306 HSPD1P10809 573 aaKnown RBP9.09□□□□□ -0.95
VTI1A-202ENST00000432306 DPEP1P16444 411 aa9.09□□□□□ -0.95
VTI1A-202ENST00000432306 SYKP43405 635 aa9.09□□□□□ -0.95
VTI1A-202ENST00000432306 SARSP49591 514 aaKnown RBP9.09□□□□□ -0.95
VTI1A-202ENST00000432306 GNG11P61952 73 aa9.09□□□□□ -0.95
VTI1A-202ENST00000432306 RASSF7Q02833 373 aa9.09□□□□□ -0.95
VTI1A-202ENST00000432306 CFAP100Q494V2 611 aa9.09□□□□□ -0.95
VTI1A-202ENST00000432306 WDR93Q6P2C0 686 aa9.09□□□□□ -0.95
VTI1A-202ENST00000432306 LEKR1Q6ZMV7 388 aa9.09□□□□□ -0.95
VTI1A-202ENST00000432306 LRP10Q7Z4F1 713 aa9.09□□□□□ -0.95
VTI1A-202ENST00000432306 RIC3Q7Z5B4 369 aa9.09□□□□□ -0.95
VTI1A-202ENST00000432306 SUGP1Q8IWZ8 645 aaKnown RBP9.09□□□□□ -0.95
VTI1A-202ENST00000432306 SAMD3Q8N6K7 520 aa9.09□□□□□ -0.95
VTI1A-202ENST00000432306 FAM71BQ8TC56 605 aa9.09□□□□□ -0.95
VTI1A-202ENST00000432306 PPM1EQ8WY54 764 aa9.09□□□□□ -0.95
VTI1A-202ENST00000432306 ERCC4Q92889 916 aaPredicted RBP9.09□□□□□ -0.95
VTI1A-202ENST00000432306 RSPH9Q9H1X1 276 aaPredicted RBP9.09□□□□□ -0.95
VTI1A-202ENST00000432306 ZCCHC17Q9NP64 241 aaKnown RBP9.09□□□□□ -0.95
VTI1A-202ENST00000432306 AVENQ9NQS1 362 aaPredicted RBP9.09□□□□□ -0.95
VTI1A-202ENST00000432306 MYO1AQ9UBC5 1043 aa9.09□□□□□ -0.95
VTI1A-202ENST00000432306 DCTN4Q9UJW0 460 aa9.09□□□□□ -0.95
VTI1A-202ENST00000432306 MROH7-TTC4A0A0A0MT08 1334 aa9.09□□□□□ -0.95
VTI1A-202ENST00000432306 ABCC12Q96J65 1359 aa9.09□□□□□ -0.95
VTI1A-202ENST00000432306 CCDC88AQ3V6T2 1871 aa9.09□□□□□ -0.95
VTI1A-202ENST00000432306 ZNF831Q5JPB2 1677 aa9.09□□□□□ -0.95
VTI1A-202ENST00000432306 A0A1B0GUL7 405 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 TIMM44O43615 452 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 ANXA1P04083 346 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 ATP6V1AP38606 617 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 AARSP49588 968 aaKnown RBP eCLIP9.08□□□□□ -0.96
VTI1A-202ENST00000432306 EMP3P54852 163 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 CHMP4BP1P59074 171 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 NEXNQ0ZGT2 675 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 TRAPPC3LQ5T215 181 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 TTC39BQ5VTQ0 682 aaPredicted RBP9.08□□□□□ -0.96
VTI1A-202ENST00000432306 SYNE3Q6ZMZ3 975 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 ARMCX6Q7L4S7 300 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 MB21D2Q8IYB1 491 aaPredicted RBP9.08□□□□□ -0.96
VTI1A-202ENST00000432306 MLKLQ8NB16 471 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 SPATA20Q8TB22 786 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 DHX58Q96C10 678 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 EDC3Q96F86 508 aaKnown RBP9.08□□□□□ -0.96
VTI1A-202ENST00000432306 SEC62Q99442 399 aaKnown RBP9.08□□□□□ -0.96
VTI1A-202ENST00000432306 MAP3K14Q99558 947 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 APBA2Q99767 749 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 RRAGCQ9HB90 399 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 PIM2Q9P1W9 311 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 DACH1Q9UI36 760 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 LCMT1Q9UIC8 334 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 HPS5Q9UPZ3 1129 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 RTCBQ9Y3I0 505 aaKnown RBP9.08□□□□□ -0.96
VTI1A-202ENST00000432306 A0A1B0GTH6 734 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 CCDC175P0C221 793 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 ATP2B4P23634 1241 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 GNALP38405 381 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 PBX1P40424 430 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 TNNI2P48788 182 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 CASP7P55210 303 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 CORO7P57737 925 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 CCT2P78371 535 aaKnown RBP9.08□□□□□ -0.96
VTI1A-202ENST00000432306 IRX3P78415 501 aaPredicted RBP9.08□□□□□ -0.96
VTI1A-202ENST00000432306 NR1I3Q14994 352 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 PLEKHG4Q58EX7 1191 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 EPHA10Q5JZY3 1008 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 SWT1Q5T5J6 900 aaKnown RBP9.08□□□□□ -0.96
VTI1A-202ENST00000432306 SHC4Q6S5L8 630 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 OLFM4Q6UX06 510 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 CCDC129Q6ZRS4 1044 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 RASGRP2Q7LDG7 609 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 SVIPQ8NHG7 77 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 SNRNP27Q8WVK2 155 aaKnown RBP9.08□□□□□ -0.96
VTI1A-202ENST00000432306 SPIRE2Q8WWL2 714 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 MKL1Q969V6 931 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 CCDC51Q96ER9 411 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 SLC39A13Q96H72 371 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 FMNL2Q96PY5 1086 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 LRRC2Q9BYS8 371 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 NCOA5Q9HCD5 579 aaKnown RBP9.08□□□□□ -0.96
VTI1A-202ENST00000432306 TMOD3Q9NYL9 352 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 RNF181Q9P0P0 153 aa9.08□□□□□ -0.96
VTI1A-202ENST00000432306 GOLGA6CA6NDK9 693 aa9.07□□□□□ -0.96
VTI1A-202ENST00000432306 GOLGA6BA6NDN3 693 aa9.07□□□□□ -0.96
VTI1A-202ENST00000432306 KIF28PB7ZC32 967 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms