RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 KLK7P49862 253 aa18.78■□□□□ 0.6
TRAF3IP1-202ENST00000391993 DNM2P50570 870 aa18.78■□□□□ 0.6
TRAF3IP1-202ENST00000391993 RPS6KA1Q15418 735 aa18.78■□□□□ 0.6
TRAF3IP1-202ENST00000391993 DDX42Q86XP3 938 aaKnown RBP eCLIP18.78■□□□□ 0.6
TRAF3IP1-202ENST00000391993 GSDMAQ96QA5 445 aa18.78■□□□□ 0.6
TRAF3IP1-202ENST00000391993 IQGAP1P46940 1657 aa18.78■□□□□ 0.6
TRAF3IP1-202ENST00000391993 OPLAHO14841 1288 aa18.78■□□□□ 0.6
TRAF3IP1-202ENST00000391993 SNRPA1P09661 255 aaKnown RBP18.78■□□□□ 0.6
TRAF3IP1-202ENST00000391993 TSGA10IPQ3SY00 556 aa18.78■□□□□ 0.6
TRAF3IP1-202ENST00000391993 CYB5R4Q7L1T6 521 aa18.78■□□□□ 0.6
TRAF3IP1-202ENST00000391993 HEATR3Q7Z4Q2 680 aa18.78■□□□□ 0.6
TRAF3IP1-202ENST00000391993 TMEM139Q8IV31 216 aa18.78■□□□□ 0.6
TRAF3IP1-202ENST00000391993 TRAF5O00463 557 aa18.77■□□□□ 0.6
TRAF3IP1-202ENST00000391993 TSG101Q99816 390 aa18.77■□□□□ 0.6
TRAF3IP1-202ENST00000391993 SLC39A2Q9NP94 309 aa18.77■□□□□ 0.6
TRAF3IP1-202ENST00000391993 COPRSQ9NQ92 184 aa18.77■□□□□ 0.6
TRAF3IP1-202ENST00000391993 DZIP3Q86Y13 1208 aaKnown RBP18.77■□□□□ 0.6
TRAF3IP1-202ENST00000391993 TMEM87BQ96K49 555 aa18.77■□□□□ 0.6
TRAF3IP1-202ENST00000391993 OSBPL9Q96SU4 736 aa18.77■□□□□ 0.6
TRAF3IP1-202ENST00000391993 ATP7BP35670 1465 aa18.77■□□□□ 0.59
TRAF3IP1-202ENST00000391993 HIP1RO75146 1068 aa18.77■□□□□ 0.59
TRAF3IP1-202ENST00000391993 SWT1Q5T5J6 900 aaKnown RBP18.77■□□□□ 0.59
TRAF3IP1-202ENST00000391993 TRMT1LQ7Z2T5 733 aaKnown RBP18.77■□□□□ 0.59
TRAF3IP1-202ENST00000391993 KIF2BQ8N4N8 673 aa18.77■□□□□ 0.59
TRAF3IP1-202ENST00000391993 STAG1Q8WVM7 1258 aa18.77■□□□□ 0.59
TRAF3IP1-202ENST00000391993 KRT23Q9C075 422 aa18.77■□□□□ 0.59
TRAF3IP1-202ENST00000391993 RBM12Q9NTZ6 932 aaKnown RBP18.77■□□□□ 0.59
TRAF3IP1-202ENST00000391993 MDH1P40925 334 aaKnown RBP18.76■□□□□ 0.59
TRAF3IP1-202ENST00000391993 ERFP50548 548 aa18.76■□□□□ 0.59
TRAF3IP1-202ENST00000391993 DHX9Q08211 1270 aaKnown RBP18.76■□□□□ 0.59
TRAF3IP1-202ENST00000391993 LMNTD2Q8IXW0 634 aa18.76■□□□□ 0.59
TRAF3IP1-202ENST00000391993 MYCBPAPQ8TBZ2 947 aa18.76■□□□□ 0.59
TRAF3IP1-202ENST00000391993 KCNB2Q92953 911 aa18.76■□□□□ 0.59
TRAF3IP1-202ENST00000391993 MED23Q9ULK4 1368 aa18.76■□□□□ 0.59
TRAF3IP1-202ENST00000391993 A0A1W2PRG0 241 aa18.76■□□□□ 0.59
TRAF3IP1-202ENST00000391993 WDR93Q6P2C0 686 aa18.76■□□□□ 0.59
TRAF3IP1-202ENST00000391993 MB21D1Q8N884 522 aa18.76■□□□□ 0.59
TRAF3IP1-202ENST00000391993 TSEN2Q8NCE0 465 aaKnown RBP18.76■□□□□ 0.59
TRAF3IP1-202ENST00000391993 MDM1Q8TC05 714 aa18.76■□□□□ 0.59
TRAF3IP1-202ENST00000391993 CYFIP2Q96F07 1278 aa18.76■□□□□ 0.59
TRAF3IP1-202ENST00000391993 CNOT6LQ96LI5 555 aaKnown RBP18.76■□□□□ 0.59
TRAF3IP1-202ENST00000391993 SPHKAPQ2M3C7 1700 aa18.76■□□□□ 0.59
TRAF3IP1-202ENST00000391993 KRIT1O00522 736 aa18.76■□□□□ 0.59
TRAF3IP1-202ENST00000391993 RGS16O15492 202 aaPredicted RBP18.76■□□□□ 0.59
TRAF3IP1-202ENST00000391993 ZNF790Q6PG37 636 aa18.76■□□□□ 0.59
TRAF3IP1-202ENST00000391993 OTUD6AQ7L8S5 288 aa18.76■□□□□ 0.59
TRAF3IP1-202ENST00000391993 ACTR5Q9H9F9 607 aaPredicted RBP18.76■□□□□ 0.59
TRAF3IP1-202ENST00000391993 KCND1Q9NSA2 647 aa18.76■□□□□ 0.59
TRAF3IP1-202ENST00000391993 BAZ2BQ9UIF8 2168 aaKnown RBP18.76■□□□□ 0.59
TRAF3IP1-202ENST00000391993 KDRP35968 1356 aa18.75■□□□□ 0.59
TRAF3IP1-202ENST00000391993 H7C1D1 291 aa18.75■□□□□ 0.59
TRAF3IP1-202ENST00000391993 PDE2AO00408 941 aaPredicted RBP18.75■□□□□ 0.59
TRAF3IP1-202ENST00000391993 AP1G2O75843 785 aa18.75■□□□□ 0.59
TRAF3IP1-202ENST00000391993 PLEKP08567 350 aaPredicted RBP18.75■□□□□ 0.59
TRAF3IP1-202ENST00000391993 PRCPP42785 496 aa18.75■□□□□ 0.59
TRAF3IP1-202ENST00000391993 USPL1Q5W0Q7 1092 aa18.75■□□□□ 0.59
TRAF3IP1-202ENST00000391993 ZSWIM5Q9P217 1185 aa18.75■□□□□ 0.59
TRAF3IP1-202ENST00000391993 SWAP70Q9UH65 585 aa18.75■□□□□ 0.59
TRAF3IP1-202ENST00000391993 STX8Q9UNK0 236 aa18.75■□□□□ 0.59
TRAF3IP1-202ENST00000391993 RANBP1P43487 201 aa18.75■□□□□ 0.59
TRAF3IP1-202ENST00000391993 PSEN1P49768 467 aa18.75■□□□□ 0.59
TRAF3IP1-202ENST00000391993 LETM2Q2VYF4 491 aa18.75■□□□□ 0.59
TRAF3IP1-202ENST00000391993 KCNV1Q6PIU1 500 aa18.75■□□□□ 0.59
TRAF3IP1-202ENST00000391993 BMP2KQ9NSY1 1161 aaPredicted RBP18.75■□□□□ 0.59
TRAF3IP1-202ENST00000391993 PCDHA13Q9Y5I0 950 aa18.75■□□□□ 0.59
TRAF3IP1-202ENST00000391993 USH1CQ9Y6N9 552 aa18.75■□□□□ 0.59
TRAF3IP1-202ENST00000391993 TSPY2A6NKD2 308 aa18.75■□□□□ 0.59
TRAF3IP1-202ENST00000391993 EVI5O60447 810 aa18.75■□□□□ 0.59
TRAF3IP1-202ENST00000391993 MMP1P03956 469 aa18.75■□□□□ 0.59
TRAF3IP1-202ENST00000391993 KIF11P52732 1056 aa18.75■□□□□ 0.59
TRAF3IP1-202ENST00000391993 KIF6Q6ZMV9 814 aa18.75■□□□□ 0.59
TRAF3IP1-202ENST00000391993 NELFCDQ8IXH7 590 aa18.75■□□□□ 0.59
TRAF3IP1-202ENST00000391993 ZNF654Q8IZM8 581 aa18.75■□□□□ 0.59
TRAF3IP1-202ENST00000391993 STAMBPL1Q96FJ0 436 aa18.75■□□□□ 0.59
TRAF3IP1-202ENST00000391993 INTS9Q9NV88 658 aaKnown RBP18.75■□□□□ 0.59
TRAF3IP1-202ENST00000391993 KCNG1Q9UIX4 513 aa18.75■□□□□ 0.59
TRAF3IP1-202ENST00000391993 CRB1P82279 1406 aa18.75■□□□□ 0.59
TRAF3IP1-202ENST00000391993 SLC9C1Q4G0N8 1177 aa18.74■□□□□ 0.59
TRAF3IP1-202ENST00000391993 ALDH8A1Q9H2A2 487 aaPredicted RBP18.74■□□□□ 0.59
TRAF3IP1-202ENST00000391993 RNF41Q9H4P4 317 aaPredicted RBP18.74■□□□□ 0.59
TRAF3IP1-202ENST00000391993 KANSL2Q9H9L4 492 aa18.74■□□□□ 0.59
TRAF3IP1-202ENST00000391993 SHPRHQ149N8 1683 aa18.74■□□□□ 0.59
TRAF3IP1-202ENST00000391993 CYP7A1P22680 504 aa18.74■□□□□ 0.59
TRAF3IP1-202ENST00000391993 ARMC3Q5W041 872 aa18.74■□□□□ 0.59
TRAF3IP1-202ENST00000391993 INTS8Q75QN2 995 aaKnown RBP18.74■□□□□ 0.59
TRAF3IP1-202ENST00000391993 TBC1D10CQ8IV04 446 aa18.74■□□□□ 0.59
TRAF3IP1-202ENST00000391993 ESR2Q92731 530 aa18.74■□□□□ 0.59
TRAF3IP1-202ENST00000391993 ARHGEF2Q92974 986 aaKnown RBP18.74■□□□□ 0.59
TRAF3IP1-202ENST00000391993 ATP6V1G3Q96LB4 118 aa18.74■□□□□ 0.59
TRAF3IP1-202ENST00000391993 PTGISQ16647 500 aa18.74■□□□□ 0.59
TRAF3IP1-202ENST00000391993 FAM43BQ6ZT52 329 aaPredicted RBP18.74■□□□□ 0.59
TRAF3IP1-202ENST00000391993 CALML4Q96GE6 196 aa18.74■□□□□ 0.59
TRAF3IP1-202ENST00000391993 SGSM3Q96HU1 749 aa18.74■□□□□ 0.59
TRAF3IP1-202ENST00000391993 NLRP3Q96P20 1036 aa18.74■□□□□ 0.59
TRAF3IP1-202ENST00000391993 GOLPH3Q9H4A6 298 aa18.74■□□□□ 0.59
TRAF3IP1-202ENST00000391993 JAG2Q9Y219 1238 aa18.74■□□□□ 0.59
TRAF3IP1-202ENST00000391993 SRPRBQ9Y5M8 271 aaKnown RBP18.74■□□□□ 0.59
TRAF3IP1-202ENST00000391993 SETD1BQ9UPS6 1966 aaKnown RBP18.74■□□□□ 0.59
TRAF3IP1-202ENST00000391993 CEBPAP49715 358 aaPredicted RBP18.73■□□□□ 0.59
TRAF3IP1-202ENST00000391993 TSC22D3Q99576 134 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms