RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 ICAM1P05362 532 aa23.17■■□□□ 1.3
DDR1-228ENST00000376575 PRMT2P55345 433 aa23.17■■□□□ 1.3
DDR1-228ENST00000376575 APOBRQ0VD83 1088 aa23.17■■□□□ 1.3
DDR1-228ENST00000376575 CTCFLQ8NI51 663 aaPredicted RBP23.17■■□□□ 1.3
DDR1-228ENST00000376575 USP6NLQ92738 828 aa23.17■■□□□ 1.3
DDR1-228ENST00000376575 TBC1D32Q96NH3 1257 aa23.17■■□□□ 1.3
DDR1-228ENST00000376575 LZTS2Q9BRK4 669 aa23.17■■□□□ 1.3
DDR1-228ENST00000376575 TRIM17Q9Y577 477 aa23.17■■□□□ 1.3
DDR1-228ENST00000376575 TNPO2O14787 897 aaKnown RBP23.16■■□□□ 1.3
DDR1-228ENST00000376575 RXRAP19793 462 aa23.16■■□□□ 1.3
DDR1-228ENST00000376575 GNAQP50148 359 aa23.16■■□□□ 1.3
DDR1-228ENST00000376575 SNAP25P60880 206 aa23.16■■□□□ 1.3
DDR1-228ENST00000376575 FGD1P98174 961 aa23.16■■□□□ 1.3
DDR1-228ENST00000376575 PLS1Q14651 629 aa23.16■■□□□ 1.3
DDR1-228ENST00000376575 PPP2R5BQ15173 497 aa23.16■■□□□ 1.3
DDR1-228ENST00000376575 PKN2Q16513 984 aaKnown RBP23.16■■□□□ 1.3
DDR1-228ENST00000376575 MORN1Q5T089 497 aa23.16■■□□□ 1.3
DDR1-228ENST00000376575 SNRNP48Q6IEG0 339 aaKnown RBP23.16■■□□□ 1.3
DDR1-228ENST00000376575 SYNE3Q6ZMZ3 975 aa23.16■■□□□ 1.3
DDR1-228ENST00000376575 PLEKHH3Q7Z736 793 aa23.16■■□□□ 1.3
DDR1-228ENST00000376575 MICU3Q86XE3 530 aa23.16■■□□□ 1.3
DDR1-228ENST00000376575 CPXCR1Q8N123 301 aa23.16■■□□□ 1.3
DDR1-228ENST00000376575 AGBL1Q96MI9 1066 aa23.16■■□□□ 1.3
DDR1-228ENST00000376575 SPZ1Q9BXG8 430 aa23.16■■□□□ 1.3
DDR1-228ENST00000376575 ZNF236Q9UL36 1845 aa23.15■■□□□ 1.3
DDR1-228ENST00000376575 STRNO43815 780 aa23.15■■□□□ 1.3
DDR1-228ENST00000376575 PTPREP23469 700 aa23.15■■□□□ 1.3
DDR1-228ENST00000376575 HOXD10P28358 340 aa23.15■■□□□ 1.3
DDR1-228ENST00000376575 GRB14Q14449 540 aa23.15■■□□□ 1.3
DDR1-228ENST00000376575 COL13A1Q5TAT6 717 aaPredicted RBP23.15■■□□□ 1.3
DDR1-228ENST00000376575 ABRAQ8N0Z2 381 aa23.15■■□□□ 1.3
DDR1-228ENST00000376575 COA7Q96BR5 231 aa23.15■■□□□ 1.3
DDR1-228ENST00000376575 UPF2Q9HAU5 1272 aaKnown RBP23.15■■□□□ 1.3
DDR1-228ENST00000376575 PNMA2Q9UL42 364 aa23.15■■□□□ 1.3
DDR1-228ENST00000376575 PTPN22Q9Y2R2 807 aa23.15■■□□□ 1.3
DDR1-228ENST00000376575 PDIA3P30101 505 aaKnown RBP23.14■■□□□ 1.29
DDR1-228ENST00000376575 PRKCZQ05513 592 aa23.14■■□□□ 1.29
DDR1-228ENST00000376575 FUT2Q10981 343 aa23.14■■□□□ 1.29
DDR1-228ENST00000376575 CDC37Q16543 378 aaPredicted RBP23.14■■□□□ 1.29
DDR1-228ENST00000376575 TKFCQ3LXA3 575 aa23.14■■□□□ 1.29
DDR1-228ENST00000376575 CCDC174Q6PII3 467 aa23.14■■□□□ 1.29
DDR1-228ENST00000376575 TMTC3Q6ZXV5 915 aa23.14■■□□□ 1.29
DDR1-228ENST00000376575 RAB11FIP4Q86YS3 637 aa23.14■■□□□ 1.29
DDR1-228ENST00000376575 SRBD1Q8N5C6 995 aaKnown RBP23.14■■□□□ 1.29
DDR1-228ENST00000376575 ZNF274Q96GC6 653 aaPredicted RBP23.14■■□□□ 1.29
DDR1-228ENST00000376575 RBM28Q9NW13 759 aaKnown RBP23.14■■□□□ 1.29
DDR1-228ENST00000376575 GABRQQ9UN88 632 aa23.14■■□□□ 1.29
DDR1-228ENST00000376575 CTDP1Q9Y5B0 961 aaPredicted RBP23.14■■□□□ 1.29
DDR1-228ENST00000376575 ZNFX1Q9P2E3 1918 aaKnown RBP23.14■■□□□ 1.29
DDR1-228ENST00000376575 SLC15A5A6NIM6 579 aa23.13■■□□□ 1.29
DDR1-228ENST00000376575 PLEKHA8P1O95397 391 aa23.13■■□□□ 1.29
DDR1-228ENST00000376575 IRF5Q13568 498 aa23.13■■□□□ 1.29
DDR1-228ENST00000376575 NCAPG2Q86XI2 1143 aa23.13■■□□□ 1.29
DDR1-228ENST00000376575 CCDC144CPQ8IYA2 1237 aa23.13■■□□□ 1.29
DDR1-228ENST00000376575 CHST13Q8NET6 341 aa23.13■■□□□ 1.29
DDR1-228ENST00000376575 MYH6P13533 1939 aa23.13■■□□□ 1.29
DDR1-228ENST00000376575 CENPFP49454 3210 aa23.13■■□□□ 1.29
DDR1-228ENST00000376575 ZBTB5O15062 677 aa23.12■■□□□ 1.29
DDR1-228ENST00000376575 ECM2O94769 699 aaPredicted RBP23.12■■□□□ 1.29
DDR1-228ENST00000376575 CDC27P30260 824 aa23.12■■□□□ 1.29
DDR1-228ENST00000376575 FLT3LGP49771 235 aa23.12■■□□□ 1.29
DDR1-228ENST00000376575 NEK4P51957 841 aa23.12■■□□□ 1.29
DDR1-228ENST00000376575 AK2P54819 239 aa23.12■■□□□ 1.29
DDR1-228ENST00000376575 RTN1Q16799 776 aa23.12■■□□□ 1.29
DDR1-228ENST00000376575 QRICH1Q2TAL8 776 aa23.12■■□□□ 1.29
DDR1-228ENST00000376575 FBXO46Q6PJ61 603 aaPredicted RBP23.12■■□□□ 1.29
DDR1-228ENST00000376575 CCAR1Q8IX12 1150 aaKnown RBP23.12■■□□□ 1.29
DDR1-228ENST00000376575 SOCS4Q8WXH5 440 aa23.12■■□□□ 1.29
DDR1-228ENST00000376575 CCPG1Q9ULG6 757 aa23.12■■□□□ 1.29
DDR1-228ENST00000376575 GOLGA8AA7E2F4 631 aa23.11■■□□□ 1.29
DDR1-228ENST00000376575 GOLGA8BA8MQT2 603 aa23.11■■□□□ 1.29
DDR1-228ENST00000376575 PPP1R11O60927 126 aaPredicted RBP23.11■■□□□ 1.29
DDR1-228ENST00000376575 HOXC6P09630 235 aa23.11■■□□□ 1.29
DDR1-228ENST00000376575 ANKRD1Q15327 319 aa23.11■■□□□ 1.29
DDR1-228ENST00000376575 IL27Q8NEV9 243 aa23.11■■□□□ 1.29
DDR1-228ENST00000376575 NUDT12Q9BQG2 462 aa23.11■■□□□ 1.29
DDR1-228ENST00000376575 VAT1LQ9HCJ6 419 aa23.11■■□□□ 1.29
DDR1-228ENST00000376575 FBXO40Q9UH90 709 aa23.11■■□□□ 1.29
DDR1-228ENST00000376575 IGHA2P01877 340 aa23.1■■□□□ 1.29
DDR1-228ENST00000376575 XRCC5P13010 732 aaKnown RBP23.1■■□□□ 1.29
DDR1-228ENST00000376575 METAP2P50579 478 aaKnown RBP eCLIP23.1■■□□□ 1.293e-6■■■■□ 25.7
DDR1-228ENST00000376575 CMTR1Q8N1G2 835 aaKnown RBP23.1■■□□□ 1.29
DDR1-228ENST00000376575 CLEC4DQ8WXI8 215 aa23.1■■□□□ 1.29
DDR1-228ENST00000376575 TRERF1Q96PN7 1200 aa23.1■■□□□ 1.29
DDR1-228ENST00000376575 PIGSQ96S52 555 aa23.1■■□□□ 1.29
DDR1-228ENST00000376575 MCOLN1Q9GZU1 580 aa23.1■■□□□ 1.29
DDR1-228ENST00000376575 TPCN1Q9ULQ1 816 aa23.1■■□□□ 1.29
DDR1-228ENST00000376575 DNAJC25-GNG10A0A024R161 153 aa23.09■■□□□ 1.29
DDR1-228ENST00000376575 PNMA6FA0A0J9YX94 578 aa23.09■■□□□ 1.29
DDR1-228ENST00000376575 CCDC196A0A1B0GTZ2 297 aa23.09■■□□□ 1.29
DDR1-228ENST00000376575 FCER1AP12319 257 aa23.09■■□□□ 1.29
DDR1-228ENST00000376575 TAL1P17542 331 aaPredicted RBP23.09■■□□□ 1.29
DDR1-228ENST00000376575 ADD1P35611 737 aaKnown RBP23.09■■□□□ 1.29
DDR1-228ENST00000376575 MAP2K5Q13163 448 aa23.09■■□□□ 1.29
DDR1-228ENST00000376575 NTRK3Q16288 839 aa23.09■■□□□ 1.29
DDR1-228ENST00000376575 ACAD9Q9H845 621 aa23.09■■□□□ 1.29
DDR1-228ENST00000376575 RNF146Q9NTX7 359 aa23.09■■□□□ 1.29
DDR1-228ENST00000376575 PTCH2Q9Y6C5 1203 aa23.09■■□□□ 1.29
DDR1-228ENST00000376575 IVNS1ABPQ9Y6Y0 642 aa23.09■■□□□ 1.29
DDR1-228ENST00000376575 CNTNAP5Q8WYK1 1306 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms