RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 STRN4Q9NRL3 753 aa22.91■■□□□ 1.26
TMEFF1-201ENST00000374879 FAM217BQ9NTX9 383 aaPredicted RBP22.91■■□□□ 1.26
TMEFF1-201ENST00000374879 DDX60Q8IY21 1712 aaKnown RBP22.91■■□□□ 1.26
TMEFF1-201ENST00000374879 IL15P40933 162 aaPredicted RBP22.91■■□□□ 1.26
TMEFF1-201ENST00000374879 SLC8A3P57103 927 aa22.91■■□□□ 1.26
TMEFF1-201ENST00000374879 CYP27A1Q02318 531 aa22.91■■□□□ 1.26
TMEFF1-201ENST00000374879 TSR1Q2NL82 804 aaKnown RBP22.91■■□□□ 1.26
TMEFF1-201ENST00000374879 LRRC24Q50LG9 513 aa22.91■■□□□ 1.26
TMEFF1-201ENST00000374879 ZNF594Q96JF6 807 aaPredicted RBP22.91■■□□□ 1.26
TMEFF1-201ENST00000374879 PSMB7Q99436 277 aa22.91■■□□□ 1.26
TMEFF1-201ENST00000374879 ZBTB3Q9H5J0 574 aa22.91■■□□□ 1.26
TMEFF1-201ENST00000374879 ATP2C2O75185 946 aa22.9■■□□□ 1.26
TMEFF1-201ENST00000374879 NR5A1Q13285 461 aa22.9■■□□□ 1.26
TMEFF1-201ENST00000374879 RILPL1Q5EBL4 403 aa22.9■■□□□ 1.26
TMEFF1-201ENST00000374879 RRAGBQ5VZM2 374 aa22.9■■□□□ 1.26
TMEFF1-201ENST00000374879 SAMD1Q6SPF0 538 aaPredicted RBP22.9■■□□□ 1.26
TMEFF1-201ENST00000374879 ZNF572Q7Z3I7 529 aaPredicted RBP22.9■■□□□ 1.26
TMEFF1-201ENST00000374879 MAB21L3Q8N8X9 362 aa22.9■■□□□ 1.26
TMEFF1-201ENST00000374879 PURBQ96QR8 312 aaKnown RBP22.9■■□□□ 1.26
TMEFF1-201ENST00000374879 WDR19Q8NEZ3 1342 aa22.9■■□□□ 1.26
TMEFF1-201ENST00000374879 MMP1P03956 469 aa22.9■■□□□ 1.26
TMEFF1-201ENST00000374879 CXCR5P32302 372 aa22.9■■□□□ 1.26
TMEFF1-201ENST00000374879 SCTRP47872 440 aa22.9■■□□□ 1.26
TMEFF1-201ENST00000374879 FKBP4Q02790 459 aaKnown RBP eCLIP22.9■■□□□ 1.26
TMEFF1-201ENST00000374879 ITIH3Q06033 890 aa22.9■■□□□ 1.26
TMEFF1-201ENST00000374879 ITGB3BPQ13352 177 aaPredicted RBP22.9■■□□□ 1.26
TMEFF1-201ENST00000374879 TBC1D31Q96DN5 1066 aa22.9■■□□□ 1.26
TMEFF1-201ENST00000374879 SPDL1Q96EA4 605 aa22.9■■□□□ 1.26
TMEFF1-201ENST00000374879 ATP6V1G3Q96LB4 118 aa22.9■■□□□ 1.26
TMEFF1-201ENST00000374879 GPR108Q9NPR9 543 aa22.9■■□□□ 1.26
TMEFF1-201ENST00000374879 ANKRD18BA2A2Z9 1011 aa22.89■■□□□ 1.26
TMEFF1-201ENST00000374879 SPAG1Q07617 926 aa22.89■■□□□ 1.26
TMEFF1-201ENST00000374879 QPCTQ16769 361 aa22.89■■□□□ 1.26
TMEFF1-201ENST00000374879 RSRC1Q96IZ7 334 aaKnown RBP22.89■■□□□ 1.26
TMEFF1-201ENST00000374879 VPS54Q9P1Q0 977 aa22.89■■□□□ 1.26
TMEFF1-201ENST00000374879 ZBTB43O43298 467 aa22.89■■□□□ 1.25
TMEFF1-201ENST00000374879 HPDP32754 393 aaPredicted RBP22.89■■□□□ 1.25
TMEFF1-201ENST00000374879 CARSP49589 748 aaKnown RBP22.89■■□□□ 1.25
TMEFF1-201ENST00000374879 TATDN2Q93075 761 aa22.89■■□□□ 1.25
TMEFF1-201ENST00000374879 NFU1Q9UMS0 254 aa22.89■■□□□ 1.25
TMEFF1-201ENST00000374879 RIPOR2Q9Y4F9 1068 aa22.89■■□□□ 1.25
TMEFF1-201ENST00000374879 MGRN1O60291 552 aa22.88■■□□□ 1.25
TMEFF1-201ENST00000374879 VAV2P52735 878 aa22.88■■□□□ 1.25
TMEFF1-201ENST00000374879 SSRP1Q08945 709 aaKnown RBP22.88■■□□□ 1.25
TMEFF1-201ENST00000374879 SAFBQ15424 915 aaKnown RBP eCLIP22.88■■□□□ 1.25
TMEFF1-201ENST00000374879 RCSD1Q6JBY9 416 aa22.88■■□□□ 1.25
TMEFF1-201ENST00000374879 CAPN11Q9UMQ6 739 aa22.88■■□□□ 1.25
TMEFF1-201ENST00000374879 GOLGA8AA7E2F4 631 aa22.88■■□□□ 1.25
TMEFF1-201ENST00000374879 EYA2O00167 538 aa22.88■■□□□ 1.25
TMEFF1-201ENST00000374879 PES1O00541 588 aaKnown RBP22.88■■□□□ 1.25
TMEFF1-201ENST00000374879 CYLC1P35663 651 aaPredicted RBP22.88■■□□□ 1.25
TMEFF1-201ENST00000374879 PEX19P40855 299 aa22.88■■□□□ 1.25
TMEFF1-201ENST00000374879 XRCC4Q13426 336 aa22.88■■□□□ 1.25
TMEFF1-201ENST00000374879 NFRKBQ6P4R8 1299 aa22.88■■□□□ 1.25
TMEFF1-201ENST00000374879 MB21D1Q8N884 522 aa22.88■■□□□ 1.25
TMEFF1-201ENST00000374879 CALR3Q96L12 384 aaKnown RBP22.88■■□□□ 1.25
TMEFF1-201ENST00000374879 PUS7LQ9H0K6 701 aaKnown RBP22.88■■□□□ 1.25
TMEFF1-201ENST00000374879 BLZF1Q9H2G9 400 aa22.88■■□□□ 1.25
TMEFF1-201ENST00000374879 NHEJ1Q9H9Q4 299 aaPredicted RBP22.88■■□□□ 1.25
TMEFF1-201ENST00000374879 SPATS2LQ9NUQ6 558 aaKnown RBP22.88■■□□□ 1.25
TMEFF1-201ENST00000374879 SPATA31A3Q5VYP0 1347 aa22.87■■□□□ 1.25
TMEFF1-201ENST00000374879 ANKRD33BA6NCL7 494 aa22.87■■□□□ 1.25
TMEFF1-201ENST00000374879 TNFRSF8P28908 595 aa22.87■■□□□ 1.25
TMEFF1-201ENST00000374879 IFFO1Q0D2I5 559 aa22.87■■□□□ 1.25
TMEFF1-201ENST00000374879 PPP4R3AQ6IN85 833 aa22.87■■□□□ 1.25
TMEFF1-201ENST00000374879 RWDD2AQ9UIY3 292 aa22.87■■□□□ 1.25
TMEFF1-201ENST00000374879 CAPN6Q9Y6Q1 641 aa22.87■■□□□ 1.25
TMEFF1-201ENST00000374879 GMNCA6NCL1 334 aa22.87■■□□□ 1.25
TMEFF1-201ENST00000374879 C8orf74Q6P047 294 aa22.87■■□□□ 1.25
TMEFF1-201ENST00000374879 NFXL1Q6ZNB6 911 aa22.87■■□□□ 1.25
TMEFF1-201ENST00000374879 TICAM2Q86XR7 235 aa22.87■■□□□ 1.25
TMEFF1-201ENST00000374879 LMBR1Q8WVP7 490 aa22.87■■□□□ 1.25
TMEFF1-201ENST00000374879 OSBPL9Q96SU4 736 aa22.87■■□□□ 1.25
TMEFF1-201ENST00000374879 AGPAT5Q9NUQ2 364 aa22.87■■□□□ 1.25
TMEFF1-201ENST00000374879 LEMD3Q9Y2U8 911 aa22.87■■□□□ 1.25
TMEFF1-201ENST00000374879 ESYT3A0FGR9 886 aa22.86■■□□□ 1.25
TMEFF1-201ENST00000374879 GUCY2FP51841 1108 aa22.86■■□□□ 1.25
TMEFF1-201ENST00000374879 ADCY2Q08462 1091 aa22.86■■□□□ 1.25
TMEFF1-201ENST00000374879 KIF5AQ12840 1032 aa22.86■■□□□ 1.25
TMEFF1-201ENST00000374879 ZCRB1Q8TBF4 217 aaKnown RBP22.86■■□□□ 1.25
TMEFF1-201ENST00000374879 NELFBQ8WX92 580 aa22.86■■□□□ 1.25
TMEFF1-201ENST00000374879 IFT81Q8WYA0 676 aa22.86■■□□□ 1.25
TMEFF1-201ENST00000374879 THOC1Q96FV9 657 aaKnown RBP22.86■■□□□ 1.25
TMEFF1-201ENST00000374879 PCDH11XQ9BZA7 1347 aa22.86■■□□□ 1.25
TMEFF1-201ENST00000374879 PCDH11YQ9BZA8 1340 aa22.86■■□□□ 1.25
TMEFF1-201ENST00000374879 ZSCAN5CA6NGD5 496 aaPredicted RBP22.86■■□□□ 1.25
TMEFF1-201ENST00000374879 GLI1P08151 1106 aa22.86■■□□□ 1.25
TMEFF1-201ENST00000374879 PAK1Q13153 545 aa22.86■■□□□ 1.25
TMEFF1-201ENST00000374879 MEA1Q16626 185 aa22.86■■□□□ 1.25
TMEFF1-201ENST00000374879 AP1ARQ63HQ0 302 aa22.86■■□□□ 1.25
TMEFF1-201ENST00000374879 CD302Q8IX05 232 aa22.86■■□□□ 1.25
TMEFF1-201ENST00000374879 NSMCE1Q8WV22 266 aa22.86■■□□□ 1.25
TMEFF1-201ENST00000374879 SYMPKQ92797 1274 aaKnown RBP22.86■■□□□ 1.25
TMEFF1-201ENST00000374879 PUS3Q9BZE2 481 aaKnown RBP22.86■■□□□ 1.25
TMEFF1-201ENST00000374879 NOD2Q9HC29 1040 aa22.86■■□□□ 1.25
TMEFF1-201ENST00000374879 LRWD1Q9UFC0 647 aa22.86■■□□□ 1.25
TMEFF1-201ENST00000374879 MAPK8IP1Q9UQF2 711 aa22.86■■□□□ 1.25
TMEFF1-201ENST00000374879 BCL9LQ86UU0 1499 aa22.86■■□□□ 1.25
TMEFF1-201ENST00000374879 SRRM3A6NNA2 597 aaPredicted RBP22.85■■□□□ 1.25
TMEFF1-201ENST00000374879 IPO7O95373 1038 aaKnown RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms