RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 COA7Q96BR5 231 aa12.62□□□□□ -0.39
BRCC3-204ENST00000369462 MS4A4AQ96JQ5 239 aa12.62□□□□□ -0.39
BRCC3-204ENST00000369462 BARHL2Q9NY43 387 aa12.62□□□□□ -0.39
BRCC3-204ENST00000369462 PTPRFP10586 1907 aa12.62□□□□□ -0.39
BRCC3-204ENST00000369462 ZSCAN22P10073 491 aaPredicted RBP12.62□□□□□ -0.39
BRCC3-204ENST00000369462 GTF2A2P52657 109 aa12.62□□□□□ -0.39
BRCC3-204ENST00000369462 AGTPBP1Q9UPW5 1226 aa12.62□□□□□ -0.39
BRCC3-204ENST00000369462 STXBP3O00186 592 aa12.61□□□□□ -0.39
BRCC3-204ENST00000369462 CETPP11597 493 aa12.61□□□□□ -0.39
BRCC3-204ENST00000369462 NAPAP54920 295 aa12.61□□□□□ -0.39
BRCC3-204ENST00000369462 CCDC174Q6PII3 467 aa12.61□□□□□ -0.39
BRCC3-204ENST00000369462 RASAL3Q86YV0 1011 aa12.61□□□□□ -0.39
BRCC3-204ENST00000369462 ATG4CQ96DT6 458 aa12.61□□□□□ -0.39
BRCC3-204ENST00000369462 CCL15-CCL14A0A0B4J2E2 113 aa12.61□□□□□ -0.39
BRCC3-204ENST00000369462 HOXA7P31268 230 aaPredicted RBP12.61□□□□□ -0.39
BRCC3-204ENST00000369462 NLRP5P59047 1200 aa12.61□□□□□ -0.39
BRCC3-204ENST00000369462 CCL15Q16663 113 aa12.61□□□□□ -0.39
BRCC3-204ENST00000369462 USH1GQ495M9 461 aa12.61□□□□□ -0.39
BRCC3-204ENST00000369462 FBXO11Q86XK2 927 aa12.61□□□□□ -0.39
BRCC3-204ENST00000369462 AMNQ9BXJ7 453 aa12.61□□□□□ -0.39
BRCC3-204ENST00000369462 RANBP17Q9H2T7 1088 aaKnown RBP12.61□□□□□ -0.39
BRCC3-204ENST00000369462 HOXC10Q9NYD6 342 aa12.61□□□□□ -0.39
BRCC3-204ENST00000369462 PCDHA1Q9Y5I3 950 aa12.61□□□□□ -0.39
BRCC3-204ENST00000369462 MMP1P03956 469 aa12.61□□□□□ -0.39
BRCC3-204ENST00000369462 DSG3P32926 999 aa12.61□□□□□ -0.39
BRCC3-204ENST00000369462 IRX3P78415 501 aaPredicted RBP12.61□□□□□ -0.39
BRCC3-204ENST00000369462 PHF20Q9BVI0 1012 aa12.61□□□□□ -0.39
BRCC3-204ENST00000369462 SLC38A10Q9HBR0 1119 aa12.61□□□□□ -0.39
BRCC3-204ENST00000369462 SH3GLB2Q9NR46 395 aa12.61□□□□□ -0.39
BRCC3-204ENST00000369462 CTDP1Q9Y5B0 961 aaPredicted RBP12.61□□□□□ -0.39
BRCC3-204ENST00000369462 VWA5AO00534 786 aa12.6□□□□□ -0.39
BRCC3-204ENST00000369462 SAFBQ15424 915 aaKnown RBP eCLIP12.6□□□□□ -0.39
BRCC3-204ENST00000369462 GPAT2Q6NUI2 795 aa12.6□□□□□ -0.39
BRCC3-204ENST00000369462 CPXCR1Q8N123 301 aa12.6□□□□□ -0.39
BRCC3-204ENST00000369462 BRI3BPQ8WY22 251 aa12.6□□□□□ -0.39
BRCC3-204ENST00000369462 SPDYE16A6NNV3 312 aaPredicted RBP12.6□□□□□ -0.39
BRCC3-204ENST00000369462 hCG_1984214I3L0E3 225 aa12.6□□□□□ -0.39
BRCC3-204ENST00000369462 ZBED4O75132 1171 aa12.6□□□□□ -0.39
BRCC3-204ENST00000369462 TAL1P17542 331 aaPredicted RBP12.6□□□□□ -0.39
BRCC3-204ENST00000369462 GRM1Q13255 1194 aa12.6□□□□□ -0.39
BRCC3-204ENST00000369462 FOXD4L6Q3SYB3 417 aaPredicted RBP12.6□□□□□ -0.39
BRCC3-204ENST00000369462 FOXD4L3Q6VB84 417 aaPredicted RBP12.6□□□□□ -0.39
BRCC3-204ENST00000369462 DIS3L2Q8IYB7 885 aaKnown RBP12.6□□□□□ -0.39
BRCC3-204ENST00000369462 ZNF713Q8N859 430 aaPredicted RBP12.6□□□□□ -0.39
BRCC3-204ENST00000369462 CCDC148Q8NFR7 591 aa12.6□□□□□ -0.39
BRCC3-204ENST00000369462 CCDC12Q8WUD4 166 aaPredicted RBP12.6□□□□□ -0.39
BRCC3-204ENST00000369462 P2RX7Q99572 595 aaKnown RBP12.6□□□□□ -0.39
BRCC3-204ENST00000369462 ASCC2Q9H1I8 757 aaPredicted RBP12.6□□□□□ -0.39
BRCC3-204ENST00000369462 BTBD18B2RXH4 712 aa12.59□□□□□ -0.39
BRCC3-204ENST00000369462 F13A1P00488 732 aa12.59□□□□□ -0.39
BRCC3-204ENST00000369462 PABPC4Q13310 644 aaKnown RBP eCLIP12.59□□□□□ -0.39
BRCC3-204ENST00000369462 GNL2Q13823 731 aaKnown RBP12.59□□□□□ -0.39
BRCC3-204ENST00000369462 AGBL1Q96MI9 1066 aa12.59□□□□□ -0.39
BRCC3-204ENST00000369462 PCNTO95613 3336 aa12.59□□□□□ -0.39
BRCC3-204ENST00000369462 SMCO2A6NFE2 343 aa12.59□□□□□ -0.39
BRCC3-204ENST00000369462 BTBD19C9JJ37 291 aa12.59□□□□□ -0.39
BRCC3-204ENST00000369462 SLC10A3P09131 477 aa12.59□□□□□ -0.39
BRCC3-204ENST00000369462 KIF23Q02241 960 aaPredicted RBP12.59□□□□□ -0.39
BRCC3-204ENST00000369462 NPY5RQ15761 445 aa12.59□□□□□ -0.39
BRCC3-204ENST00000369462 RGS22Q8NE09 1264 aa12.59□□□□□ -0.39
BRCC3-204ENST00000369462 OXER1Q8TDS5 423 aa12.59□□□□□ -0.39
BRCC3-204ENST00000369462 CCDC102AQ96A19 550 aa12.59□□□□□ -0.39
BRCC3-204ENST00000369462 RAVER2Q9HCJ3 691 aaKnown RBP12.59□□□□□ -0.39
BRCC3-204ENST00000369462 ADAMTS5Q9UNA0 930 aa12.59□□□□□ -0.39
BRCC3-204ENST00000369462 ZNF536O15090 1300 aa12.59□□□□□ -0.39
BRCC3-204ENST00000369462 FDX1P10109 184 aa12.58□□□□□ -0.4
BRCC3-204ENST00000369462 CALML3P27482 149 aa12.58□□□□□ -0.4
BRCC3-204ENST00000369462 APLP1P51693 650 aa12.58□□□□□ -0.4
BRCC3-204ENST00000369462 NR5A1Q13285 461 aa12.58□□□□□ -0.4
BRCC3-204ENST00000369462 TNPO1Q92973 898 aaKnown RBP12.58□□□□□ -0.4
BRCC3-204ENST00000369462 ZMYND12Q9H0C1 365 aa12.58□□□□□ -0.4
BRCC3-204ENST00000369462 CCPG1Q9ULG6 757 aa12.58□□□□□ -0.4
BRCC3-204ENST00000369462 MYPNQ86TC9 1320 aa12.58□□□□□ -0.4
BRCC3-204ENST00000369462 KIF28PB7ZC32 967 aa12.58□□□□□ -0.4
BRCC3-204ENST00000369462 PDHXO00330 501 aa12.58□□□□□ -0.4
BRCC3-204ENST00000369462 ADAMTS3O15072 1205 aa12.58□□□□□ -0.4
BRCC3-204ENST00000369462 ICAM1P05362 532 aa12.58□□□□□ -0.4
BRCC3-204ENST00000369462 FAM173BQ6P4H8 233 aa12.58□□□□□ -0.4
BRCC3-204ENST00000369462 HHIPL1Q96JK4 782 aa12.58□□□□□ -0.4
BRCC3-204ENST00000369462 PTPN18Q99952 460 aa12.58□□□□□ -0.4
BRCC3-204ENST00000369462 BRMS1Q9HCU9 246 aa12.58□□□□□ -0.4
BRCC3-204ENST00000369462 C6orf50Q9HD87 102 aa12.58□□□□□ -0.4
BRCC3-204ENST00000369462 LOC285556D6RIA3 1793 aa12.58□□□□□ -0.4
BRCC3-204ENST00000369462 OSBPP22059 807 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 GNA11P29992 359 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 KRT2P35908 639 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 HERVK_113P62684 666 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 TRAF1Q13077 416 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 CYP4F22Q6NT55 531 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 FAM43AQ8N2R8 423 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 ZSCAN16Q9H4T2 348 aaPredicted RBP12.57□□□□□ -0.4
BRCC3-204ENST00000369462 PCDHA4Q9UN74 947 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 MANSC4A6NHS7 340 aaPredicted RBP12.57□□□□□ -0.4
BRCC3-204ENST00000369462 FAM155AB1AL88 458 aaPredicted RBP12.57□□□□□ -0.4
BRCC3-204ENST00000369462 PEX10O60683 326 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 CYP2C8P10632 490 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 RESTQ13127 1097 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 PLS1Q14651 629 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 TMEM132BQ14DG7 1078 aa12.57□□□□□ -0.4
BRCC3-204ENST00000369462 POTEEQ6S8J3 1075 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms