RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 ARID4AP29374 1257 aaPredicted RBP17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 SLC20A2Q08357 652 aa17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 UBE3CQ15386 1083 aa17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 EPHA10Q5JZY3 1008 aa17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 BEND6Q5SZJ8 279 aaPredicted RBP17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 UHMK1Q8TAS1 419 aaKnown RBP17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 SNX29Q8TEQ0 813 aa17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 ARHGEF2Q92974 986 aaKnown RBP17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 HOMER2Q9NSB8 354 aa17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 CCDC169A6NNP5 214 aa17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 SPOPO43791 374 aa17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 MB21D1Q8N884 522 aa17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 INTS9Q9NV88 658 aaKnown RBP17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 TBC1D7Q9P0N9 293 aa17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 AMFRQ9UKV5 643 aa17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 EIF4A3P38919 411 aaKnown RBP17.61■□□□□ 0.41
CLSTN1-201ENST00000361311 RAD9BQ6WBX8 426 aa17.61■□□□□ 0.41
CLSTN1-201ENST00000361311 BLIDQ8IZY5 108 aa17.61■□□□□ 0.41
CLSTN1-201ENST00000361311 TRIM6Q9C030 488 aaPredicted RBP17.61■□□□□ 0.41
CLSTN1-201ENST00000361311 SLC39A2Q9NP94 309 aa17.61■□□□□ 0.41
CLSTN1-201ENST00000361311 KLHL14Q9P2G3 628 aa17.61■□□□□ 0.41
CLSTN1-201ENST00000361311 KIF1CO43896 1103 aaKnown RBP17.61■□□□□ 0.41
CLSTN1-201ENST00000361311 CDC25AP30304 524 aa17.61■□□□□ 0.41
CLSTN1-201ENST00000361311 POLR2FP61218 127 aaKnown RBP17.61■□□□□ 0.41
CLSTN1-201ENST00000361311 CUL5Q93034 780 aa17.61■□□□□ 0.41
CLSTN1-201ENST00000361311 SALL3Q9BXA9 1300 aa17.61■□□□□ 0.41
CLSTN1-201ENST00000361311 H3BQF6 201 aa17.61■□□□□ 0.41
CLSTN1-201ENST00000361311 AATFQ9NY61 560 aaKnown RBP eCLIP17.61■□□□□ 0.41
CLSTN1-201ENST00000361311 NOVA2Q9UNW9 492 aaKnown RBP17.61■□□□□ 0.41
CLSTN1-201ENST00000361311 METP08581 1390 aa17.61■□□□□ 0.41
CLSTN1-201ENST00000361311 STX2P32856 288 aa17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 UBL4BQ8N7F7 174 aa17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 NOA1Q8NC60 698 aaKnown RBP17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 DHTKD1Q96HY7 919 aaPredicted RBP17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 SLC24A3Q9HC58 644 aa17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 EPB41P11171 864 aaKnown RBP17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 TMEM132AQ24JP5 1023 aa17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 PI16Q6UXB8 463 aa17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 TTLL7Q6ZT98 887 aa17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 CRACR2BQ8N4Y2 399 aaPredicted RBP17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 GLI2P10070 1586 aa17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 ATP1A1P05023 1023 aaKnown RBP17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 USPL1Q5W0Q7 1092 aa17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 KRT25Q7Z3Z0 450 aa17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 CCDC105Q8IYK2 499 aa17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 P2RX5Q93086 422 aa17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 ASIC3Q9UHC3 531 aa17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 PCDHA13Q9Y5I0 950 aa17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 EFCAB6Q5THR3 1501 aa17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 LUC7L3O95232 432 aaKnown RBP17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 FTCDO95954 541 aa17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 GJC1P36383 396 aa17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 EXOSC10Q01780 885 aaKnown RBP17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 FMR1Q06787 632 aaKnown RBP eCLIP17.6■□□□□ 0.411e-6■■■■□ 23.7
CLSTN1-201ENST00000361311 RASGRP2Q7LDG7 609 aa17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 TRMT1LQ7Z2T5 733 aaKnown RBP17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 PPP1R14CQ8TAE6 165 aa17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 ZNF526Q8TF50 670 aaPredicted RBP17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 TBX22Q9Y458 520 aa17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 IQGAP1P46940 1657 aa17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 TULP4Q9NRJ4 1543 aa17.6■□□□□ 0.41
CLSTN1-201ENST00000361311 TARSL2A2RTX5 802 aaKnown RBP17.59■□□□□ 0.41
CLSTN1-201ENST00000361311 SCG2P13521 617 aa17.59■□□□□ 0.41
CLSTN1-201ENST00000361311 KIF11P52732 1056 aa17.59■□□□□ 0.41
CLSTN1-201ENST00000361311 ZNF131P52739 623 aa17.59■□□□□ 0.41
CLSTN1-201ENST00000361311 PNKPQ96T60 521 aa17.59■□□□□ 0.41
CLSTN1-201ENST00000361311 MMS19Q96T76 1030 aa17.59■□□□□ 0.41
CLSTN1-201ENST00000361311 MEFVO15553 781 aaPredicted RBP17.59■□□□□ 0.41
CLSTN1-201ENST00000361311 INF2Q27J81 1249 aa17.59■□□□□ 0.41
CLSTN1-201ENST00000361311 ZNF579Q8NAF0 562 aaKnown RBP17.59■□□□□ 0.41
CLSTN1-201ENST00000361311 ZSCAN10Q96SZ4 725 aaPredicted RBP17.59■□□□□ 0.41
CLSTN1-201ENST00000361311 ZSWIM5Q9P217 1185 aa17.59■□□□□ 0.41
CLSTN1-201ENST00000361311 L1RE1Q9UN81 338 aa17.59■□□□□ 0.41
CLSTN1-201ENST00000361311 A0A1B0GTH6 734 aa17.59■□□□□ 0.41
CLSTN1-201ENST00000361311 LIFRP42702 1097 aa17.59■□□□□ 0.41
CLSTN1-201ENST00000361311 IRAK1P51617 712 aa17.59■□□□□ 0.41
CLSTN1-201ENST00000361311 GDAQ9Y2T3 454 aa17.59■□□□□ 0.41
CLSTN1-201ENST00000361311 USP6P35125 1406 aa17.59■□□□□ 0.41
CLSTN1-201ENST00000361311 NAA35Q5VZE5 725 aa17.59■□□□□ 0.41
CLSTN1-201ENST00000361311 LRRC31Q6UY01 552 aa17.59■□□□□ 0.41
CLSTN1-201ENST00000361311 KLHL29Q96CT2 875 aa17.59■□□□□ 0.41
CLSTN1-201ENST00000361311 KLC4Q9NSK0 619 aa17.59■□□□□ 0.41
CLSTN1-201ENST00000361311 GEMIN8Q9NWZ8 242 aaKnown RBP17.59■□□□□ 0.41
CLSTN1-201ENST00000361311 CTTNBP2NLQ9P2B4 639 aa17.59■□□□□ 0.41
CLSTN1-201ENST00000361311 SERPINA10Q9UK55 444 aa17.59■□□□□ 0.41
CLSTN1-201ENST00000361311 ZFYVE16Q7Z3T8 1539 aa17.58■□□□□ 0.41
CLSTN1-201ENST00000361311 TTC26A0AVF1 554 aa17.58■□□□□ 0.41
CLSTN1-201ENST00000361311 IGKV5-2P06315 115 aa17.58■□□□□ 0.41
CLSTN1-201ENST00000361311 PPP2R5EQ16537 467 aa17.58■□□□□ 0.41
CLSTN1-201ENST00000361311 ADAT2Q7Z6V5 191 aaKnown RBP17.58■□□□□ 0.41
CLSTN1-201ENST00000361311 MCUR1Q96AQ8 359 aa17.58■□□□□ 0.41
CLSTN1-201ENST00000361311 EIF3HO15372 352 aaKnown RBP eCLIP17.58■□□□□ 0.4
CLSTN1-201ENST00000361311 HPCAL4Q9UM19 191 aa17.58■□□□□ 0.4
CLSTN1-201ENST00000361311 SUN1O94901 812 aa17.58■□□□□ 0.4
CLSTN1-201ENST00000361311 RBM5P52756 815 aaKnown RBP eCLIP17.58■□□□□ 0.41e-6■■■■■ 30
CLSTN1-201ENST00000361311 DZIP3Q86Y13 1208 aaKnown RBP17.58■□□□□ 0.4
CLSTN1-201ENST00000361311 U2AF1L4Q8WU68 220 aaKnown RBP17.58■□□□□ 0.4
CLSTN1-201ENST00000361311 STAG1Q8WVM7 1258 aa17.58■□□□□ 0.4
CLSTN1-201ENST00000361311 RAB3IPQ96QF0 476 aaPredicted RBP17.58■□□□□ 0.4
CLSTN1-201ENST00000361311 PLAAQ9Y263 795 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms