RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 CCDC194A0A1B0GVG4 234 aa19.86■□□□□ 0.77
CLDN4-201ENST00000340958 SPTLC2O15270 562 aa19.86■□□□□ 0.77
CLDN4-201ENST00000340958 TTLL12Q14166 644 aaPredicted RBP19.86■□□□□ 0.77
CLDN4-201ENST00000340958 JMYQ8N9B5 988 aa19.86■□□□□ 0.77
CLDN4-201ENST00000340958 LINC00301Q8NCQ3 95 aa19.86■□□□□ 0.77
CLDN4-201ENST00000340958 CHURC1Q8WUH1 139 aa19.86■□□□□ 0.77
CLDN4-201ENST00000340958 MYH15Q9Y2K3 1946 aa19.86■□□□□ 0.77
CLDN4-201ENST00000340958 RASSF10A6NK89 507 aa19.86■□□□□ 0.77
CLDN4-201ENST00000340958 NASPP49321 788 aaPredicted RBP19.86■□□□□ 0.77
CLDN4-201ENST00000340958 USP14P54578 494 aa19.86■□□□□ 0.77
CLDN4-201ENST00000340958 QRICH1Q2TAL8 776 aa19.86■□□□□ 0.77
CLDN4-201ENST00000340958 KIAA1755Q5JYT7 1200 aa19.86■□□□□ 0.77
CLDN4-201ENST00000340958 KIFC2Q96AC6 838 aa19.86■□□□□ 0.77
CLDN4-201ENST00000340958 ZMYND12Q9H0C1 365 aa19.86■□□□□ 0.77
CLDN4-201ENST00000340958 CEP131Q9UPN4 1083 aa19.86■□□□□ 0.77
CLDN4-201ENST00000340958 SSC5DA1L4H1 1573 aa19.85■□□□□ 0.77
CLDN4-201ENST00000340958 PTPRAP18433 802 aa19.85■□□□□ 0.77
CLDN4-201ENST00000340958 ADCY7P51828 1080 aa19.85■□□□□ 0.77
CLDN4-201ENST00000340958 SPP2Q13103 211 aa19.85■□□□□ 0.77
CLDN4-201ENST00000340958 MTMR2Q13614 643 aa19.85■□□□□ 0.77
CLDN4-201ENST00000340958 NPY5RQ15761 445 aa19.85■□□□□ 0.77
CLDN4-201ENST00000340958 DAGLBQ8NCG7 672 aa19.85■□□□□ 0.77
CLDN4-201ENST00000340958 ZHX2Q9Y6X8 837 aa19.85■□□□□ 0.77
CLDN4-201ENST00000340958 IREB2P48200 963 aaKnown RBP19.84■□□□□ 0.77
CLDN4-201ENST00000340958 SNAP25P60880 206 aa19.84■□□□□ 0.77
CLDN4-201ENST00000340958 SLC39A14Q15043 492 aa19.84■□□□□ 0.77
CLDN4-201ENST00000340958 DEFB115Q30KQ5 88 aa19.84■□□□□ 0.77
CLDN4-201ENST00000340958 PPP1R18Q6NYC8 613 aa19.84■□□□□ 0.77
CLDN4-201ENST00000340958 FAM160B2Q86V87 743 aa19.84■□□□□ 0.77
CLDN4-201ENST00000340958 C2orf69Q8N8R5 385 aa19.84■□□□□ 0.77
CLDN4-201ENST00000340958 ZNF280CQ8ND82 737 aa19.84■□□□□ 0.77
CLDN4-201ENST00000340958 RASGRP4Q8TDF6 673 aa19.84■□□□□ 0.77
CLDN4-201ENST00000340958 LPAR1Q92633 364 aa19.84■□□□□ 0.77
CLDN4-201ENST00000340958 KIAA1683Q9H0B3 1180 aa19.84■□□□□ 0.77
CLDN4-201ENST00000340958 FEM1BQ9UK73 627 aa19.84■□□□□ 0.77
CLDN4-201ENST00000340958 PRR12Q9ULL5 1215 aa19.84■□□□□ 0.77
CLDN4-201ENST00000340958 PCDHA1Q9Y5I3 950 aa19.84■□□□□ 0.77
CLDN4-201ENST00000340958 CSADQ9Y600 493 aa19.84■□□□□ 0.77
CLDN4-201ENST00000340958 ATAD5Q96QE3 1844 aa19.84■□□□□ 0.77
CLDN4-201ENST00000340958 FAM205CA6NFA0 338 aa19.83■□□□□ 0.77
CLDN4-201ENST00000340958 TRIM75PA6NK02 468 aa19.83■□□□□ 0.77
CLDN4-201ENST00000340958 USP2O75604 605 aaPredicted RBP19.83■□□□□ 0.77
CLDN4-201ENST00000340958 MARCKSP29966 332 aaPredicted RBP19.83■□□□□ 0.77
CLDN4-201ENST00000340958 BTNL9Q6UXG8 535 aa19.83■□□□□ 0.77
CLDN4-201ENST00000340958 MOB2Q70IA6 237 aa19.83■□□□□ 0.77
CLDN4-201ENST00000340958 MTMR8Q96EF0 704 aa19.83■□□□□ 0.77
CLDN4-201ENST00000340958 AMNQ9BXJ7 453 aa19.83■□□□□ 0.77
CLDN4-201ENST00000340958 PCDHA6Q9UN73 950 aa19.83■□□□□ 0.77
CLDN4-201ENST00000340958 PCDHA8Q9Y5H6 950 aa19.83■□□□□ 0.77
CLDN4-201ENST00000340958 TOB1P50616 345 aaPredicted RBP19.83■□□□□ 0.76
CLDN4-201ENST00000340958 HUNKP57058 714 aa19.83■□□□□ 0.76
CLDN4-201ENST00000340958 MAP3K9P80192 1104 aa19.83■□□□□ 0.76
CLDN4-201ENST00000340958 EARS2Q5JPH6 523 aaKnown RBP19.83■□□□□ 0.76
CLDN4-201ENST00000340958 FBXO11Q86XK2 927 aa19.83■□□□□ 0.76
CLDN4-201ENST00000340958 REXO1Q8N1G1 1221 aaKnown RBP19.83■□□□□ 0.76
CLDN4-201ENST00000340958 TNFRSF25Q93038 417 aa19.83■□□□□ 0.76
CLDN4-201ENST00000340958 PGBD1Q96JS3 809 aa19.83■□□□□ 0.76
CLDN4-201ENST00000340958 TANGO6Q9C0B7 1094 aa19.83■□□□□ 0.76
CLDN4-201ENST00000340958 PCDHA7Q9UN72 937 aa19.83■□□□□ 0.76
CLDN4-201ENST00000340958 ESYT2A0FGR8 921 aa19.82■□□□□ 0.76
CLDN4-201ENST00000340958 WDR46O15213 610 aaKnown RBP19.82■□□□□ 0.76
CLDN4-201ENST00000340958 USH1GQ495M9 461 aa19.82■□□□□ 0.76
CLDN4-201ENST00000340958 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.82■□□□□ 0.762e-7■■■□□ 16
CLDN4-201ENST00000340958 CUL5Q93034 780 aa19.82■□□□□ 0.76
CLDN4-201ENST00000340958 WDR18Q9BV38 432 aa19.82■□□□□ 0.76
CLDN4-201ENST00000340958 BIN2Q9UBW5 565 aaPredicted RBP19.82■□□□□ 0.76
CLDN4-201ENST00000340958 PCDHB6Q9Y5E3 794 aa19.82■□□□□ 0.76
CLDN4-201ENST00000340958 PPP1R11O60927 126 aaPredicted RBP19.81■□□□□ 0.76
CLDN4-201ENST00000340958 TRAPPC10P48553 1259 aa19.81■□□□□ 0.76
CLDN4-201ENST00000340958 VEGFBP49765 207 aa19.81■□□□□ 0.76
CLDN4-201ENST00000340958 MRPL12P52815 198 aaKnown RBP19.81■□□□□ 0.76
CLDN4-201ENST00000340958 BACE1P56817 501 aa19.81■□□□□ 0.76
CLDN4-201ENST00000340958 TRAF1Q13077 416 aa19.81■□□□□ 0.76
CLDN4-201ENST00000340958 NOM1Q5C9Z4 860 aaKnown RBP19.81■□□□□ 0.76
CLDN4-201ENST00000340958 TTC38Q5R3I4 469 aa19.81■□□□□ 0.76
CLDN4-201ENST00000340958 PAXIP1Q6ZW49 1069 aaPredicted RBP19.81■□□□□ 0.76
CLDN4-201ENST00000340958 KRT25Q7Z3Z0 450 aa19.81■□□□□ 0.76
CLDN4-201ENST00000340958 CCAR1Q8IX12 1150 aaKnown RBP19.81■□□□□ 0.76
CLDN4-201ENST00000340958 PSTPIP2Q9H939 334 aa19.81■□□□□ 0.76
CLDN4-201ENST00000340958 GSE1Q14687 1217 aa19.81■□□□□ 0.76
CLDN4-201ENST00000340958 ZNF174Q15697 407 aa19.81■□□□□ 0.76
CLDN4-201ENST00000340958 NOL9Q5SY16 702 aaKnown RBP19.81■□□□□ 0.76
CLDN4-201ENST00000340958 JAKMIP3Q5VZ66 844 aa19.81■□□□□ 0.76
CLDN4-201ENST00000340958 CYP4F22Q6NT55 531 aa19.81■□□□□ 0.76
CLDN4-201ENST00000340958 CCDC174Q6PII3 467 aa19.81■□□□□ 0.76
CLDN4-201ENST00000340958 CCDC73Q6ZRK6 1079 aa19.81■□□□□ 0.76
CLDN4-201ENST00000340958 GLT8D2Q9H1C3 349 aa19.81■□□□□ 0.76
CLDN4-201ENST00000340958 CTDP1Q9Y5B0 961 aaPredicted RBP19.81■□□□□ 0.76
CLDN4-201ENST00000340958 DOCK1Q14185 1865 aa19.8■□□□□ 0.76
CLDN4-201ENST00000340958 ADAMTS3O15072 1205 aa19.8■□□□□ 0.76
CLDN4-201ENST00000340958 PPP6R2O75170 966 aa19.8■□□□□ 0.76
CLDN4-201ENST00000340958 BMP15O95972 392 aa19.8■□□□□ 0.76
CLDN4-201ENST00000340958 FKBP1BP68106 108 aa19.8■□□□□ 0.76
CLDN4-201ENST00000340958 GRM1Q13255 1194 aa19.8■□□□□ 0.76
CLDN4-201ENST00000340958 VGLL4Q14135 290 aa19.8■□□□□ 0.76
CLDN4-201ENST00000340958 NONOQ15233 471 aaKnown RBP eCLIP19.8■□□□□ 0.76
CLDN4-201ENST00000340958 ADALQ6DHV7 355 aa19.8■□□□□ 0.76
CLDN4-201ENST00000340958 RIC8AQ9NPQ8 531 aa19.8■□□□□ 0.76
CLDN4-201ENST00000340958 TMOD4Q9NZQ9 345 aa19.8■□□□□ 0.76
CLDN4-201ENST00000340958 OTOFQ9HC10 1997 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms