RNA–Protein interactions for RNA: ENST00000259216.4

CFC1-201, Transcript of cripto, FRL-1, cryptic family 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFC1, Length 1,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFC1-201ENST00000259216 CCDC96Q2M329 555 aa23.85■■□□□ 1.41
CFC1-201ENST00000259216 CHRDL2Q6WN34 429 aa23.85■■□□□ 1.41
CFC1-201ENST00000259216 FAM133AQ8N9E0 248 aa23.85■■□□□ 1.41
CFC1-201ENST00000259216 RANBP17Q9H2T7 1088 aaKnown RBP23.85■■□□□ 1.41
CFC1-201ENST00000259216 RNF146Q9NTX7 359 aa23.85■■□□□ 1.41
CFC1-201ENST00000259216 MTMR7Q9Y216 660 aa23.85■■□□□ 1.41
CFC1-201ENST00000259216 SYNGAP1Q96PV0 1343 aa23.84■■□□□ 1.41
CFC1-201ENST00000259216 B4E1Z4 1266 aa23.84■■□□□ 1.41
CFC1-201ENST00000259216 KDM4AO75164 1064 aa23.84■■□□□ 1.41
CFC1-201ENST00000259216 SLC16A2P36021 539 aa23.84■■□□□ 1.41
CFC1-201ENST00000259216 SLC4A3P48751 1232 aa23.84■■□□□ 1.41
CFC1-201ENST00000259216 ZNF543Q08ER8 600 aa23.84■■□□□ 1.41
CFC1-201ENST00000259216 DGKHQ86XP1 1220 aa23.84■■□□□ 1.41
CFC1-201ENST00000259216 C7orf61Q8IZ16 206 aa23.84■■□□□ 1.41
CFC1-201ENST00000259216 DDX11Q96FC9 970 aa23.84■■□□□ 1.41
CFC1-201ENST00000259216 ZKSCAN3Q9BRR0 538 aa23.84■■□□□ 1.41
CFC1-201ENST00000259216 A1CFQ9NQ94 594 aaKnown RBP23.84■■□□□ 1.41
CFC1-201ENST00000259216 HOMER2Q9NSB8 354 aa23.84■■□□□ 1.41
CFC1-201ENST00000259216 CTNNA3Q9UI47 895 aa23.84■■□□□ 1.41
CFC1-201ENST00000259216 ISY1Q9ULR0 285 aaKnown RBP23.84■■□□□ 1.41
CFC1-201ENST00000259216 CTDP1Q9Y5B0 961 aaPredicted RBP23.84■■□□□ 1.41
CFC1-201ENST00000259216 ASTN1O14525 1302 aa23.84■■□□□ 1.41
CFC1-201ENST00000259216 FRMPD2Q68DX3 1309 aaPredicted RBP23.84■■□□□ 1.41
CFC1-201ENST00000259216 PTH1RQ03431 593 aa23.83■■□□□ 1.41
CFC1-201ENST00000259216 IKQ13123 557 aaPredicted RBP23.83■■□□□ 1.41
CFC1-201ENST00000259216 IMMTQ16891 758 aaKnown RBP23.83■■□□□ 1.41
CFC1-201ENST00000259216 TKFCQ3LXA3 575 aa23.83■■□□□ 1.41
CFC1-201ENST00000259216 SYDE2Q5VT97 1194 aa23.83■■□□□ 1.41
CFC1-201ENST00000259216 ACAD9Q9H845 621 aa23.83■■□□□ 1.41
CFC1-201ENST00000259216 ZSWIM5Q9P217 1185 aa23.83■■□□□ 1.41
CFC1-201ENST00000259216 RBM27Q9P2N5 1060 aaKnown RBP23.83■■□□□ 1.41
CFC1-201ENST00000259216 MCM3APO60318 1980 aa23.83■■□□□ 1.41
CFC1-201ENST00000259216 LCTP09848 1927 aa23.82■■□□□ 1.4
CFC1-201ENST00000259216 ICAM1P05362 532 aa23.82■■□□□ 1.4
CFC1-201ENST00000259216 CNTN2Q02246 1040 aa23.82■■□□□ 1.4
CFC1-201ENST00000259216 MUM1L1Q5H9M0 696 aa23.82■■□□□ 1.4
CFC1-201ENST00000259216 GJC2Q5T442 439 aaPredicted RBP23.82■■□□□ 1.4
CFC1-201ENST00000259216 CCDC174Q6PII3 467 aa23.82■■□□□ 1.4
CFC1-201ENST00000259216 ANKRD35Q8N283 1001 aa23.82■■□□□ 1.4
CFC1-201ENST00000259216 KATNBL1Q9H079 304 aa23.82■■□□□ 1.4
CFC1-201ENST00000259216 GPCPD1Q9NPB8 672 aa23.82■■□□□ 1.4
CFC1-201ENST00000259216 SGSM2O43147 1006 aa23.81■■□□□ 1.4
CFC1-201ENST00000259216 FXR1P51114 621 aaKnown RBP eCLIP23.81■■□□□ 1.4
CFC1-201ENST00000259216 LRRC41Q15345 812 aa23.81■■□□□ 1.4
CFC1-201ENST00000259216 ENAHQ8N8S7 591 aaPredicted RBP23.81■■□□□ 1.4
CFC1-201ENST00000259216 ARRDC4Q8NCT1 418 aa23.81■■□□□ 1.4
CFC1-201ENST00000259216 LENG1Q96BZ8 264 aaPredicted RBP23.81■■□□□ 1.4
CFC1-201ENST00000259216 TRERF1Q96PN7 1200 aa23.81■■□□□ 1.4
CFC1-201ENST00000259216 TAF6LQ9Y6J9 622 aa23.81■■□□□ 1.4
CFC1-201ENST00000259216 SOWAHBA6NEL2 793 aa23.8■■□□□ 1.4
CFC1-201ENST00000259216 ALAS1P13196 640 aa23.8■■□□□ 1.4
CFC1-201ENST00000259216 ZSCAN10Q96SZ4 725 aaPredicted RBP23.8■■□□□ 1.4
CFC1-201ENST00000259216 GDF15Q99988 308 aa23.8■■□□□ 1.4
CFC1-201ENST00000259216 SENP6Q9GZR1 1112 aaPredicted RBP23.8■■□□□ 1.4
CFC1-201ENST00000259216 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.8■■□□□ 1.4
CFC1-201ENST00000259216 ZMYND8Q9ULU4 1186 aaPredicted RBP23.8■■□□□ 1.4
CFC1-201ENST00000259216 LRRC37A2A6NM11 1700 aa23.79■■□□□ 1.4
CFC1-201ENST00000259216 DNAH12Q6ZR08 3092 aa23.79■■□□□ 1.4
CFC1-201ENST00000259216 ADCY6O43306 1168 aa23.79■■□□□ 1.4
CFC1-201ENST00000259216 PCDH10Q9P2E7 1040 aa23.79■■□□□ 1.4
CFC1-201ENST00000259216 CCPG1Q9ULG6 757 aa23.79■■□□□ 1.4
CFC1-201ENST00000259216 CNPY2Q9Y2B0 182 aa23.79■■□□□ 1.4
CFC1-201ENST00000259216 ADAMTS4O75173 837 aa23.78■■□□□ 1.4
CFC1-201ENST00000259216 CYP21A2P08686 494 aa23.78■■□□□ 1.4
CFC1-201ENST00000259216 AKR1A1P14550 325 aa23.78■■□□□ 1.4
CFC1-201ENST00000259216 SNX17Q15036 470 aa23.78■■□□□ 1.4
CFC1-201ENST00000259216 SEC23AQ15436 765 aa23.78■■□□□ 1.4
CFC1-201ENST00000259216 ARMCX2Q7L311 632 aa23.78■■□□□ 1.4
CFC1-201ENST00000259216 SKAP1Q86WV1 359 aa23.78■■□□□ 1.4
CFC1-201ENST00000259216 IQCA1Q86XH1 822 aa23.78■■□□□ 1.4
CFC1-201ENST00000259216 PNMA1Q8ND90 353 aa23.78■■□□□ 1.4
CFC1-201ENST00000259216 RUFY2Q8WXA3 655 aa23.78■■□□□ 1.4
CFC1-201ENST00000259216 KRT23Q9C075 422 aa23.78■■□□□ 1.4
CFC1-201ENST00000259216 XPNPEP3Q9NQH7 507 aa23.78■■□□□ 1.4
CFC1-201ENST00000259216 CYP39A1Q9NYL5 469 aa23.78■■□□□ 1.4
CFC1-201ENST00000259216 TNKSO95271 1327 aa23.78■■□□□ 1.4
CFC1-201ENST00000259216 POTEB2H3BUK9 544 aa23.77■■□□□ 1.4
CFC1-201ENST00000259216 PGK1P00558 417 aa23.77■■□□□ 1.4
CFC1-201ENST00000259216 RARBP10826 455 aa23.77■■□□□ 1.4
CFC1-201ENST00000259216 CCDC178Q5BJE1 867 aa23.77■■□□□ 1.4
CFC1-201ENST00000259216 CYB5R4Q7L1T6 521 aa23.77■■□□□ 1.4
CFC1-201ENST00000259216 CCDC144CPQ8IYA2 1237 aa23.77■■□□□ 1.4
CFC1-201ENST00000259216 CLEC4DQ8WXI8 215 aa23.77■■□□□ 1.4
CFC1-201ENST00000259216 CPVLQ9H3G5 476 aa23.77■■□□□ 1.4
CFC1-201ENST00000259216 CNNM2Q9H8M5 875 aa23.77■■□□□ 1.4
CFC1-201ENST00000259216 PHF24Q9UPV7 400 aa23.77■■□□□ 1.4
CFC1-201ENST00000259216 NFIBO00712 420 aa23.76■■□□□ 1.39
CFC1-201ENST00000259216 GOLGA8HP0CJ92 632 aa23.76■■□□□ 1.39
CFC1-201ENST00000259216 SYN1P17600 705 aa23.76■■□□□ 1.39
CFC1-201ENST00000259216 ACVR2BQ13705 512 aa23.76■■□□□ 1.39
CFC1-201ENST00000259216 GPATCH4Q5T3I0 446 aaKnown RBP23.76■■□□□ 1.39
CFC1-201ENST00000259216 ABHD16BQ9H3Z7 469 aa23.76■■□□□ 1.39
CFC1-201ENST00000259216 DDX49Q9Y6V7 483 aaKnown RBP23.76■■□□□ 1.39
CFC1-201ENST00000259216 WDR19Q8NEZ3 1342 aa23.76■■□□□ 1.39
CFC1-201ENST00000259216 KBTBD13C9JR72 458 aa23.75■■□□□ 1.39
CFC1-201ENST00000259216 ADCYAP1R1P41586 468 aa23.75■■□□□ 1.39
CFC1-201ENST00000259216 ATN1P54259 1190 aaPredicted RBP23.75■■□□□ 1.39
CFC1-201ENST00000259216 CCSAPQ6IQ19 270 aaPredicted RBP23.75■■□□□ 1.39
CFC1-201ENST00000259216 STOX1Q6ZVD7 989 aa23.75■■□□□ 1.39
CFC1-201ENST00000259216 KLHDC9Q8NEP7 349 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms