RNA–Protein interactions for RNA: ENST00000218200.12

FMR1-201, Transcript of fragile X mental retardation 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FMR1, Length 4,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-201ENST00000218200 SFMBT2Q5VUG0 894 aa23■■□□□ 1.27
FMR1-201ENST00000218200 INTS8Q75QN2 995 aaKnown RBP23■■□□□ 1.27
FMR1-201ENST00000218200 POTEDQ86YR6 584 aa23■■□□□ 1.27
FMR1-201ENST00000218200 LMTK3Q96Q04 1460 aa23■■□□□ 1.27
FMR1-201ENST00000218200 CAPN12Q6ZSI9 719 aa23■■□□□ 1.27
FMR1-201ENST00000218200 MTUS1Q9ULD2 1270 aa23■■□□□ 1.27
FMR1-201ENST00000218200 RPL13P26373 211 aaKnown RBP23■■□□□ 1.27
FMR1-201ENST00000218200 PRPHP41219 470 aa23■■□□□ 1.27
FMR1-201ENST00000218200 IFT88Q13099 833 aa23■■□□□ 1.27
FMR1-201ENST00000218200 E2F5Q15329 346 aa23■■□□□ 1.27
FMR1-201ENST00000218200 USH1GQ495M9 461 aa23■■□□□ 1.27
FMR1-201ENST00000218200 MICAL1Q8TDZ2 1067 aa23■■□□□ 1.27
FMR1-201ENST00000218200 GNL3Q9BVP2 549 aaKnown RBP eCLIP23■■□□□ 1.27
FMR1-201ENST00000218200 RPAP1Q9BWH6 1393 aaPredicted RBP22.99■■□□□ 1.27
FMR1-201ENST00000218200 SMCO2A6NFE2 343 aa22.99■■□□□ 1.27
FMR1-201ENST00000218200 RFX5P48382 616 aaPredicted RBP22.99■■□□□ 1.27
FMR1-201ENST00000218200 POLR2FP61218 127 aaKnown RBP22.99■■□□□ 1.27
FMR1-201ENST00000218200 ADCY1Q08828 1119 aa22.99■■□□□ 1.27
FMR1-201ENST00000218200 SEC31BQ9NQW1 1179 aa22.99■■□□□ 1.27
FMR1-201ENST00000218200 C3P01024 1663 aa22.99■■□□□ 1.27
FMR1-201ENST00000218200 IL6STP40189 918 aaPredicted RBP22.99■■□□□ 1.27
FMR1-201ENST00000218200 LRRC41Q15345 812 aa22.99■■□□□ 1.27
FMR1-201ENST00000218200 CALCRLQ16602 461 aa22.99■■□□□ 1.27
FMR1-201ENST00000218200 CEP63Q96MT8 703 aa22.99■■□□□ 1.27
FMR1-201ENST00000218200 DENND2AQ9ULE3 1009 aa22.99■■□□□ 1.27
FMR1-201ENST00000218200 A0A1B0GUA9 196 aa22.99■■□□□ 1.27
FMR1-201ENST00000218200 SRGAP2O75044 1071 aa22.99■■□□□ 1.27
FMR1-201ENST00000218200 RPN1P04843 607 aaKnown RBP22.99■■□□□ 1.27
FMR1-201ENST00000218200 TOGARAM2Q6ZUX3 1019 aa22.99■■□□□ 1.27
FMR1-201ENST00000218200 APBB1IPQ7Z5R6 666 aaPredicted RBP22.99■■□□□ 1.27
FMR1-201ENST00000218200 CCDC105Q8IYK2 499 aa22.99■■□□□ 1.27
FMR1-201ENST00000218200 LSM14BQ9BX40 385 aaKnown RBP22.99■■□□□ 1.27
FMR1-201ENST00000218200 EPB41P11171 864 aaKnown RBP22.99■■□□□ 1.27
FMR1-201ENST00000218200 SETDB1Q15047 1291 aa22.99■■□□□ 1.27
FMR1-201ENST00000218200 U2AF1L4Q8WU68 220 aaKnown RBP22.99■■□□□ 1.27
FMR1-201ENST00000218200 TUBGCP2Q9BSJ2 902 aa22.99■■□□□ 1.27
FMR1-201ENST00000218200 MYCNP04198 464 aaPredicted RBP22.98■■□□□ 1.27
FMR1-201ENST00000218200 CLTAP09496 248 aa22.98■■□□□ 1.27
FMR1-201ENST00000218200 DNM2P50570 870 aa22.98■■□□□ 1.27
FMR1-201ENST00000218200 LACTBP83111 547 aaPredicted RBP22.98■■□□□ 1.27
FMR1-201ENST00000218200 C2orf54Q08AI8 447 aa22.98■■□□□ 1.27
FMR1-201ENST00000218200 RUFY4Q6ZNE9 571 aa22.98■■□□□ 1.27
FMR1-201ENST00000218200 VSTM4Q8IW00 320 aa22.98■■□□□ 1.27
FMR1-201ENST00000218200 ZSWIM5Q9P217 1185 aa22.98■■□□□ 1.27
FMR1-201ENST00000218200 TRIM58Q8NG06 486 aa22.98■■□□□ 1.27
FMR1-201ENST00000218200 POLD4Q9HCU8 107 aa22.98■■□□□ 1.27
FMR1-201ENST00000218200 USTQ9Y2C2 406 aa22.98■■□□□ 1.27
FMR1-201ENST00000218200 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.98■■□□□ 1.27
FMR1-201ENST00000218200 MON2Q7Z3U7 1717 aa22.98■■□□□ 1.27
FMR1-201ENST00000218200 LOC102724428A0A0B4J2F2 783 aa22.98■■□□□ 1.27
FMR1-201ENST00000218200 CCDC151A5D8V7 595 aa22.98■■□□□ 1.27
FMR1-201ENST00000218200 SIK1P57059 783 aa22.98■■□□□ 1.27
FMR1-201ENST00000218200 SEL1L2Q5TEA6 688 aa22.98■■□□□ 1.27
FMR1-201ENST00000218200 REXO1Q8N1G1 1221 aaKnown RBP22.98■■□□□ 1.27
FMR1-201ENST00000218200 RPSAP08865 295 aaKnown RBP22.97■■□□□ 1.27
FMR1-201ENST00000218200 CDC25BP30305 580 aa22.97■■□□□ 1.27
FMR1-201ENST00000218200 TCP10Q12799 353 aa22.97■■□□□ 1.27
FMR1-201ENST00000218200 CASP8Q14790 479 aa22.97■■□□□ 1.27
FMR1-201ENST00000218200 UBE3CQ15386 1083 aa22.97■■□□□ 1.27
FMR1-201ENST00000218200 FAM98CQ17RN3 349 aaKnown RBP22.97■■□□□ 1.27
FMR1-201ENST00000218200 GSPT2Q8IYD1 628 aaKnown RBP22.97■■□□□ 1.27
FMR1-201ENST00000218200 TBC1D31Q96DN5 1066 aa22.97■■□□□ 1.27
FMR1-201ENST00000218200 ISCA1Q9BUE6 129 aa22.97■■□□□ 1.27
FMR1-201ENST00000218200 VEZTQ9HBM0 779 aa22.97■■□□□ 1.27
FMR1-201ENST00000218200 BIRC3Q13489 604 aa22.97■■□□□ 1.27
FMR1-201ENST00000218200 BLIDQ8IZY5 108 aa22.97■■□□□ 1.27
FMR1-201ENST00000218200 KRT12Q99456 494 aa22.97■■□□□ 1.27
FMR1-201ENST00000218200 ACTN4O43707 911 aaKnown RBP22.97■■□□□ 1.27
FMR1-201ENST00000218200 CACNB1Q02641 598 aaPredicted RBP22.97■■□□□ 1.27
FMR1-201ENST00000218200 FAM71BQ8TC56 605 aa22.97■■□□□ 1.27
FMR1-201ENST00000218200 STMN4Q9H169 189 aaPredicted RBP22.97■■□□□ 1.27
FMR1-201ENST00000218200 GNPATO15228 680 aa22.96■■□□□ 1.27
FMR1-201ENST00000218200 GCNT3O95395 438 aa22.96■■□□□ 1.27
FMR1-201ENST00000218200 PEX19P40855 299 aa22.96■■□□□ 1.27
FMR1-201ENST00000218200 CRKLP46109 303 aaKnown RBP22.96■■□□□ 1.27
FMR1-201ENST00000218200 PNMA1Q8ND90 353 aa22.96■■□□□ 1.27
FMR1-201ENST00000218200 IKBKBO14920 756 aa22.96■■□□□ 1.27
FMR1-201ENST00000218200 FOXN1O15353 648 aa22.96■■□□□ 1.27
FMR1-201ENST00000218200 ADD2P35612 726 aa22.96■■□□□ 1.27
FMR1-201ENST00000218200 MCAMP43121 646 aa22.96■■□□□ 1.27
FMR1-201ENST00000218200 CCDC51Q96ER9 411 aa22.96■■□□□ 1.27
FMR1-201ENST00000218200 MAP3K9P80192 1104 aa22.96■■□□□ 1.27
FMR1-201ENST00000218200 ZNF804AQ7Z570 1209 aa22.96■■□□□ 1.27
FMR1-201ENST00000218200 FRMD4BQ9Y2L6 1034 aa22.96■■□□□ 1.27
FMR1-201ENST00000218200 KRIT1O00522 736 aa22.96■■□□□ 1.27
FMR1-201ENST00000218200 ATP2A1O14983 1001 aa22.96■■□□□ 1.27
FMR1-201ENST00000218200 ARHGAP25P42331 645 aa22.96■■□□□ 1.27
FMR1-201ENST00000218200 TAB3Q8N5C8 712 aaPredicted RBP22.96■■□□□ 1.27
FMR1-201ENST00000218200 ZSCAN10Q96SZ4 725 aaPredicted RBP22.96■■□□□ 1.27
FMR1-201ENST00000218200 TOM1O60784 492 aa22.95■■□□□ 1.26
FMR1-201ENST00000218200 STOX1Q6ZVD7 989 aa22.95■■□□□ 1.26
FMR1-201ENST00000218200 RTCBQ9Y3I0 505 aaKnown RBP22.95■■□□□ 1.26
FMR1-201ENST00000218200 HYOU1Q9Y4L1 999 aa22.95■■□□□ 1.26
FMR1-201ENST00000218200 CEP83Q9Y592 693 aa22.95■■□□□ 1.26
FMR1-201ENST00000218200 AK9Q5TCS8 1911 aa22.95■■□□□ 1.26
FMR1-201ENST00000218200 NRXN3Q9Y4C0 1643 aa22.95■■□□□ 1.26
FMR1-201ENST00000218200 H7C1D1 291 aa22.95■■□□□ 1.26
FMR1-201ENST00000218200 MYO1CO00159 1063 aa22.95■■□□□ 1.26
FMR1-201ENST00000218200 EHMT1Q9H9B1 1298 aa22.95■■□□□ 1.26
FMR1-201ENST00000218200 RIMS1Q86UR5 1692 aaKnown RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms