RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W YLR149CQ99296 730 aa1.76□□□□□ -2.13
CTF4YPR135W RAD50P12753 1312 aa1.75□□□□□ -2.13
CTF4YPR135W CDC16P09798 840 aa1.75□□□□□ -2.13
CTF4YPR135W KGD2P19262 463 aaPredicted RBP1.75□□□□□ -2.13
CTF4YPR135W NUP1P20676 1076 aa1.75□□□□□ -2.13
CTF4YPR135W DAL82P21705 255 aa1.75□□□□□ -2.13
CTF4YPR135W AAD3P25612 363 aa1.75□□□□□ -2.13
CTF4YPR135W MSH1P25846 959 aa1.75□□□□□ -2.13
CTF4YPR135W YKL050CP35736 922 aa1.75□□□□□ -2.13
CTF4YPR135W APM3P38153 483 aa1.75□□□□□ -2.13
CTF4YPR135W CCT3P39077 534 aaKnown RBP1.75□□□□□ -2.13
CTF4YPR135W SWD1P39706 426 aa1.75□□□□□ -2.13
CTF4YPR135W YER010CP40011 234 aa1.75□□□□□ -2.13
CTF4YPR135W YMR147WP40218 223 aaKnown RBP1.75□□□□□ -2.13
CTF4YPR135W GPI8P49018 411 aa1.75□□□□□ -2.13
CTF4YPR135W RNR4P49723 345 aaKnown RBP1.75□□□□□ -2.13
CTF4YPR135W ZIP2P53061 704 aa1.75□□□□□ -2.13
CTF4YPR135W MRPL19P53875 158 aa1.75□□□□□ -2.13
CTF4YPR135W YMR018WQ04364 514 aa1.75□□□□□ -2.13
CTF4YPR135W YLR287CQ05881 355 aa1.75□□□□□ -2.13
CTF4YPR135W YLR345WQ06137 509 aa1.75□□□□□ -2.13
CTF4YPR135W YPL191CQ08930 360 aa1.75□□□□□ -2.13
CTF4YPR135W YPQ1Q12010 308 aa1.75□□□□□ -2.13
CTF4YPR135W YKL033W-AQ86ZR7 236 aa1.75□□□□□ -2.13
CTF4YPR135W COX4P04037 155 aa1.75□□□□□ -2.13
CTF4YPR135W RPL4AP10664 362 aaKnown RBP1.75□□□□□ -2.13
CTF4YPR135W MTF1P14908 341 aaKnown RBP1.75□□□□□ -2.13
CTF4YPR135W RIT1P23796 513 aa1.75□□□□□ -2.13
CTF4YPR135W KRR1P25586 316 aaPredicted RBP1.75□□□□□ -2.13
CTF4YPR135W BRF1P29056 596 aa1.75□□□□□ -2.13
CTF4YPR135W ERG3P32353 365 aa1.75□□□□□ -2.13
CTF4YPR135W RML2P32611 393 aa1.75□□□□□ -2.13
CTF4YPR135W YBR225WP38321 900 aa1.75□□□□□ -2.13
CTF4YPR135W PFS1P38872 237 aa1.75□□□□□ -2.13
CTF4YPR135W STT3P39007 718 aaKnown RBP1.75□□□□□ -2.13
CTF4YPR135W CAJ1P39101 391 aa1.75□□□□□ -2.13
CTF4YPR135W SCS2P40075 244 aaKnown RBP1.75□□□□□ -2.13
CTF4YPR135W YER186CP40101 306 aa1.75□□□□□ -2.13
CTF4YPR135W AXL1P40851 1208 aa1.75□□□□□ -2.13
CTF4YPR135W MAD2P40958 196 aa1.75□□□□□ -2.13
CTF4YPR135W SMK1P41808 388 aa1.75□□□□□ -2.13
CTF4YPR135W BNA2P47125 453 aa1.75□□□□□ -2.13
CTF4YPR135W RPL4BP49626 362 aaKnown RBP1.75□□□□□ -2.13
CTF4YPR135W PAN2P53010 1115 aaPredicted RBP1.75□□□□□ -2.13
CTF4YPR135W ZPR1P53303 486 aaKnown RBP1.75□□□□□ -2.13
CTF4YPR135W TEX1P53851 422 aaKnown RBP1.75□□□□□ -2.13
CTF4YPR135W MTD1Q02046 320 aaKnown RBP1.75□□□□□ -2.13
CTF4YPR135W YPL071CQ02864 156 aa1.75□□□□□ -2.13
CTF4YPR135W YDR131CQ03899 556 aa1.75□□□□□ -2.13
CTF4YPR135W SPC19Q03954 165 aa1.75□□□□□ -2.13
CTF4YPR135W PPN1Q04119 674 aa1.75□□□□□ -2.13
CTF4YPR135W CSI1Q04368 295 aa1.75□□□□□ -2.13
CTF4YPR135W RRP9Q06506 573 aaKnown RBP1.75□□□□□ -2.13
CTF4YPR135W NGL1Q08213 363 aaKnown RBP1.75□□□□□ -2.13
CTF4YPR135W CIR2Q08822 631 aa1.75□□□□□ -2.13
CTF4YPR135W TAH18Q12181 623 aa1.75□□□□□ -2.13
CTF4YPR135W YDR061WQ12298 539 aa1.75□□□□□ -2.13
CTF4YPR135W SEM1O94742 89 aa1.74□□□□□ -2.13
CTF4YPR135W SIR3P06701 978 aa1.74□□□□□ -2.13
CTF4YPR135W RPS19AP07280 144 aaKnown RBP1.74□□□□□ -2.13
CTF4YPR135W RPS19BP07281 144 aaPredicted RBP1.74□□□□□ -2.13
CTF4YPR135W RPL1AP0CX43 217 aaKnown RBP1.74□□□□□ -2.13
CTF4YPR135W RPL1BP0CX44 217 aaKnown RBP1.74□□□□□ -2.13
CTF4YPR135W PYC1P11154 1178 aaKnown RBP1.74□□□□□ -2.13
CTF4YPR135W SWI4P25302 1093 aaKnown RBP1.74□□□□□ -2.13
CTF4YPR135W CMK1P27466 446 aaKnown RBP1.74□□□□□ -2.13
CTF4YPR135W YBR259WP38338 688 aa1.74□□□□□ -2.13
CTF4YPR135W SSZ1P38788 538 aaKnown RBP1.74□□□□□ -2.13
CTF4YPR135W KAP123P40069 1113 aaKnown RBP1.74□□□□□ -2.13
CTF4YPR135W YJR061WP40355 935 aa1.74□□□□□ -2.13
CTF4YPR135W BAP3P41815 604 aa1.74□□□□□ -2.13
CTF4YPR135W CTF18P49956 741 aa1.74□□□□□ -2.13
CTF4YPR135W COX18P53239 316 aa1.74□□□□□ -2.13
CTF4YPR135W YNL058CP53947 316 aa1.74□□□□□ -2.13
CTF4YPR135W SMA1Q02651 245 aa1.74□□□□□ -2.13
CTF4YPR135W HOT1Q03213 719 aa1.74□□□□□ -2.13
CTF4YPR135W RCF1Q03713 159 aa1.74□□□□□ -2.13
CTF4YPR135W COQ9Q05779 260 aa1.74□□□□□ -2.13
CTF4YPR135W VHS3Q08438 674 aa1.74□□□□□ -2.13
CTF4YPR135W DIA2Q08496 732 aaPredicted RBP1.74□□□□□ -2.13
CTF4YPR135W LEA1Q08963 238 aaPredicted RBP1.74□□□□□ -2.13
CTF4YPR135W DIN7Q12086 430 aa1.74□□□□□ -2.13
CTF4YPR135W ARP6Q12509 438 aa1.74□□□□□ -2.13
CTF4YPR135W PGK1P00560 416 aaKnown RBP1.74□□□□□ -2.13
CTF4YPR135W OLE1P21147 510 aaKnown RBP1.74□□□□□ -2.13
CTF4YPR135W CBP3P21560 335 aa1.74□□□□□ -2.13
CTF4YPR135W ERG6P25087 383 aaKnown RBP1.74□□□□□ -2.13
CTF4YPR135W MVD1P32377 396 aaKnown RBP1.74□□□□□ -2.13
CTF4YPR135W MF(ALPHA)2P32435 120 aa1.74□□□□□ -2.13
CTF4YPR135W NPL6P32832 435 aa1.74□□□□□ -2.13
CTF4YPR135W SLC1P33333 303 aa1.74□□□□□ -2.13
CTF4YPR135W BEM4P39011 633 aa1.74□□□□□ -2.13
CTF4YPR135W RAD26P40352 1085 aa1.74□□□□□ -2.13
CTF4YPR135W YML6P51998 286 aa1.74□□□□□ -2.13
CTF4YPR135W HOS2P53096 452 aaPredicted RBP1.74□□□□□ -2.13
CTF4YPR135W NOP15P53927 220 aaPredicted RBP1.74□□□□□ -2.13
CTF4YPR135W YNL092WP53934 400 aa1.74□□□□□ -2.13
CTF4YPR135W RPT6Q01939 405 aaKnown RBP1.74□□□□□ -2.13
CTF4YPR135W YMR210WQ03649 449 aa1.74□□□□□ -2.13
CTF4YPR135W VTI1Q04338 217 aa1.74□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 35 ms